CuGenDBv2

Gene ID	Lag0029447
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Coiled-coil domain-containing protein 86
Genome location	chr8:39091482..39094914
RNA-Seq Expression	Lag0029447
Synteny	Lag0029447
Gene Ontology terms	GO:0005730 - nucleolus (cellular component)
InterPro domains	IPR005579 - Cgr1-like IPR026570 - Coiled-coil domain-containing protein 86

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7016626.1 hypothetical protein SDJN02_21736, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.6e-76

90.16

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Query:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSFPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQVS
        MACTIDFRRLDEGFGGKTYKRKREEA++SLN   SENADASMD+D+S  PP KRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHR SAM VS
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSFPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQVS

Query:  RKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKAL
        RKGTTFEERE+QKMIKAA+RERKEELKEQIR NKVEKRKK+EEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLK +
Subjt:  RKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKAL

XP_008465532.1 PREDICTED: protein PXR1 [Cucumis melo]

2.4e-77

90.22

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Query:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSF-PPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQV
        MACTIDFRRLDEGFGGKTYKRKREEA+ SL   +SENAD +M+IDDS  PPP+KRSAIPSSENPDKPT+GNPTYDGVIAGKVSGRKWKQPRKHR SAMQV
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSF-PPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQV

Query:  SRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKAL
        SRKGTTFEERE+QKMIKAAF+ERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLK +
Subjt:  SRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKAL

XP_022141739.1 protein PXR1 [Momordica charantia]

3.5e-81

94.59

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRK--REEAQNSLNNADSENADASMDIDDSFPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ
        MACTIDFR LDEGFGGKTYKRK  REEAQNSLN  DSENADASM+ID+SFPPP+KRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ
Subjt:  MACTIDFRRLDEGFGGKTYKRK--REEAQNSLNNADSENADASMDIDDSFPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ

Query:  VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKAL
        VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLK +
Subjt:  VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKAL

XP_022939634.1 protein PXR1 [Cucurbita moschata]

2.6e-76

90.16

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSFPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQVS
        MACTIDFRRLDEGFGGKTYKRKREEA++SLN   SENADASMD+D+S  PP KRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHR SAM VS
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSFPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQVS

Query:  RKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKAL
        RKGTTFEERE+QKMIKAA+RERKEELKEQIR NKVEKRKK+EEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLK +
Subjt:  RKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKAL

XP_038874831.1 protein PXR1 [Benincasa hispida]

1.5e-79

92.35

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSFPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQVS
        MACTIDFRRLDEGFGGKTYKRKREEA+ SLN  +SENAD SM+IDDS PPPSKRSAIPSSENPDKPTF NPTYDGVIAGKVSGRKWKQPRKHR SAMQVS
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSFPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQVS

Query:  RKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKAL
        RKGTTFEERE+QK IKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLK +
Subjt:  RKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKAL

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CP36 Coiled-coil domain-containing protein 86

1.1e-77

90.22

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSF-PPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQV
        MACTIDFRRLDEGFGGKTYKRKREEA+ SL   +SENAD +M+IDDS  PPP+KRSAIPSSENPDKPT+GNPTYDGVIAGKVSGRKWKQPRKHR SAMQV
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSF-PPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQV

Query:  SRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKAL
        SRKGTTFEERE+QKMIKAAF+ERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLK +
Subjt:  SRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKAL

A0A5D3BKZ5 Coiled-coil domain-containing protein 86

1.1e-77

90.22

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSF-PPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQV
        MACTIDFRRLDEGFGGKTYKRKREEA+ SL   +SENAD +M+IDDS  PPP+KRSAIPSSENPDKPT+GNPTYDGVIAGKVSGRKWKQPRKHR SAMQV
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSF-PPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQV

Query:  SRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKAL
        SRKGTTFEERE+QKMIKAAF+ERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLK +
Subjt:  SRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKAL

A0A6J1CIY7 Coiled-coil domain-containing protein 86

1.7e-81

94.59

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRK--REEAQNSLNNADSENADASMDIDDSFPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ
        MACTIDFR LDEGFGGKTYKRK  REEAQNSLN  DSENADASM+ID+SFPPP+KRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ
Subjt:  MACTIDFRRLDEGFGGKTYKRK--REEAQNSLNNADSENADASMDIDDSFPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQ

Query:  VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKAL
        VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLK +
Subjt:  VSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKAL

A0A6J1FHS9 Coiled-coil domain-containing protein 86

1.3e-76

90.16

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Query:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSFPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQVS
        MACTIDFRRLDEGFGGKTYKRKREEA++SLN   SENADASMD+D+S  PP KRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHR SAM VS
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSFPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQVS

Query:  RKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKAL
        RKGTTFEERE+QKMIKAA+RERKEELKEQIR NKVEKRKK+EEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLK +
Subjt:  RKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKAL

A0A6J1JYC3 Coiled-coil domain-containing protein 86

1.3e-76

90.16

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSFPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQVS
        MACTIDFRRLDEGFGGKTYKRKREEA++SLN   SENADASMD+D+S  PP KRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHR SAM VS
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSFPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQVS

Query:  RKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKAL
        RKGTTFEERE+QKMIKAA+RERKEELKEQIR NKVEKRKK+EEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLK +
Subjt:  RKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKAL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G31410.1 unknown protein

1.2e-50

64.71

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSFPPPSKRSAIPSSENPDKP---TFGNPTYDGVIAGKVSGRKWKQPRKHRASAM
        MACT+DFR LDEGFGGKTYKRKRE  + +   A ++  +ASMDID + PP +KRSA+ SSENPDKP       PTYDGVIAGKVSGR WKQPR HR+S  
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSFPPPSKRSAIPSSENPDKP---TFGNPTYDGVIAGKVSGRKWKQPRKHRASAM

Query:  QVSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKS-KQKKLLKAL
         V  +    EE ++Q+ IK A++ER  ELKE+IR NKVEKRKK+EEREK+KKEN+LR+GTKLQKITNPKTLKKI+ S KQ+K LK +
Subjt:  QVSRKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKS-KQKKLLKAL

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCAAGAGATGGTTGTCGACGCGGCAGATGAAGGTCGTTGGCACGGCGGAGATGGTTCGTCGGCGTGGTATGAGAGGGGGTGCTGTGTAGTCGTTGACATCCCGAGTGT
CTATACTGGTATACACCCCGTGGGGACAGTTTCAAAGGGAGGGGAGAAACGACCGAGCATGCAAGAGATGGTTGTCGACGCGGCGGATGAAGGTCGTTGGCACGGCGGAG
ATGGTTCATCGGCGTGGTGTGAGAGGTATTTCTCTCTACTGAGGGAGGTTGAACTTTGTTATCCTTCCCCAATAAAGGAGCTCAATGCTCTGAAGCCCTCTTTTTCCTCC
GCCAGAAACCCTAATCCTCGAATCTCTTCAATGGCGTGCACCATCGACTTTCGCCGCCTGGACGAGGGTTTTGGGGGAAAGACCTACAAGCGAAAGCGCGAAGAAGCTCA
GAACAGCCTCAACAACGCCGACTCTGAAAATGCCGACGCCTCCATGGACATCGACGACTCGTTTCCACCTCCGTCCAAGCGATCCGCGATTCCTTCGTCGGAAAATCCTG
ACAAACCGACCTTTGGCAATCCTACCTACGACGGCGTTATCGCCGGAAAGGTCTCCGGACGGAAGTGGAAACAGCCGCGGAAGCACAGGGCGTCCGCTATGCAGGTGAGC
AGGAAAGGTACCACGTTTGAGGAGAGAGAGAAGCAGAAGATGATTAAGGCGGCGTTCAGGGAACGGAAGGAGGAATTGAAGGAGCAGATTAGGTTAAACAAGGTGGAGAA
AAGGAAGAAGAGAGAGGAGAGAGAGAAGAAGAAGAAGGAGAACATTTTGAGATCTGGAACTAAGCTACAGAAGATTACCAATCCCAAGACATTGAAGAAGATTGCTAAGT
CCAAGCAGAAGAAGCTACTTAAGGCTTTGATTTTGTGGTCAGCTATGGGTGTTTCATGGATTGGTGTGGCCTGTGGGAATGGGTGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MQEMVVDAADEGRWHGGDGSSAWYERGCCVVVDIPSVYTGIHPVGTVSKGGEKRPSMQEMVVDAADEGRWHGGDGSSAWCERYFSLLREVELCYPSPIKELNALKPSFSS
ARNPNPRISSMACTIDFRRLDEGFGGKTYKRKREEAQNSLNNADSENADASMDIDDSFPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRASAMQVS
RKGTTFEEREKQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKALILWSAMGVSWIGVACGNG

Lag0029447 (gene) of Sponge gourd (AG-4) v1 genome