CuGenDBv2

Gene ID	Lag0029462
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	U3 small nucleolar ribonucleoprotein protein IMP4
Genome location	chr8:39245666..39256088
RNA-Seq Expression	Lag0029462
Synteny	Lag0029462
Gene Ontology terms	GO:0006364 - rRNA processing (biological process) GO:0016363 - nuclear matrix (cellular component) GO:0032040 - small-subunit processome (cellular component) GO:0034457 - Mpp10 complex (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0030515 - snoRNA binding (molecular function) GO:0042134 - rRNA primary transcript binding (molecular function)
InterPro domains	IPR007109 - Brix domain IPR044281 - U3 snoRNP protein/Ribosome production factor 1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6579112.1 U3 small nucleolar ribonucleoprotein IMP4, partial [Cucurbita argyrosperma subsp. sororia]

1.2e-160

97.61

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTTVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKP PTELRNEEAALRKEIELEDD T VPRTHIDDEYANAS+IDPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTTVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        RTAN+LKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

KAG7016636.1 U3 small nucleolar ribonucleoprotein IMP4, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.2e-160

97.61

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTTVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKP PTELRNEEAALRKEIELEDD T VPRTHIDDEYANAS+IDPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTTVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        RTAN+LKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

XP_022157893.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Momordica charantia]

2.0e-160

97.27

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Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTTVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDD T VPRTHIDDEYAN SE+DPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTTVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLI+SHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        RTANILKHLFPVPKPDTKRV+TFANQSDYISFRHHIYEK GG KSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

XP_022939256.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita moschata]

1.2e-160

97.61

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Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTTVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKP PTELRNEEAALRKEIELEDD T VPRTHIDDEYANAS+IDPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTTVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        RTAN+LKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

XP_022993779.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita maxima]

1.0e-159

97.27

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTTVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKP PTELRNEEAALRKEIELEDD T VPRTHIDDEYANAS+IDPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTTVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        RTAN+LKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEK GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CPI1 U3 small nucleolar ribonucleoprotein protein IMP4

6.4e-160

97.6

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTTVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKP PTELRNEEAALRKEIELED+ T VPRTHIDDEYANASE+DPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTTVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEI+DKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLG
        RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR FLG
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLG

A0A5D3BJ53 U3 small nucleolar ribonucleoprotein IMP4

6.4e-160

97.6

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTTVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKP PTELRNEEAALRKEIELED+ T VPRTHIDDEYANASE+DPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTTVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEI+DKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLG
        RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR FLG
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLG

A0A6J1DUL2 U3 small nucleolar ribonucleoprotein protein IMP4

9.8e-161

97.27

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTTVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDD T VPRTHIDDEYAN SE+DPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTTVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLI+SHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        RTANILKHLFPVPKPDTKRV+TFANQSDYISFRHHIYEK GG KSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

A0A6J1FFE4 U3 small nucleolar ribonucleoprotein protein IMP4

5.8e-161

97.61

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTTVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKP PTELRNEEAALRKEIELEDD T VPRTHIDDEYANAS+IDPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTTVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        RTAN+LKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

A0A6J1K117 U3 small nucleolar ribonucleoprotein protein IMP4

4.9e-160

97.27

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTTVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKP PTELRNEEAALRKEIELEDD T VPRTHIDDEYANAS+IDPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTTVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        RTAN+LKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEK GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

SwissProt top hits

e value

%identity

Alignment

Q0VD01 U3 small nucleolar ribonucleoprotein protein IMP4

5.7e-89

56.85

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTTVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRR  RLRREYLYRK+ E  ER   E+K K+R ALEE + IPTELR E  AL+  +E +D        H+DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTTVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GT  EA PH+I++ F+++LG+
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL
        R ++IL++LFPVPK D++RV+TFANQ DYISFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T  KR FL
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL

Q5PQR5 U3 small nucleolar ribonucleoprotein protein IMP4

7.4e-89

56.51

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTTVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRR  RLRREYLYRK+ E  +R + EKK +++ ALEE + IPTELR E  AL+  +E +D       +H+DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTTVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GTM EA PH+I + F+++LG+
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL
        R ++IL++LFPVPK D+ RV+TFANQ DYISFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL

Q5R947 U3 small nucleolar ribonucleoprotein protein IMP4

1.3e-88

56.51

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTTVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRR  RLRREYLYRK+ E  +R   E+K ++R ALEE + IPTELR E  AL+  +E +D       +H+DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTTVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GTM EA PH+I + F+++LG+
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL
        R ++IL++LFPVPK D+ RV+TFANQ DYISFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL

Q8VHZ7 U3 small nucleolar ribonucleoprotein protein IMP4

7.4e-89

56.51

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTTVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRR  RLRREYLYRK+ E  +R + EKK +++ ALEE + IPTELR E  AL+  +E +D       +H+DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTTVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GTM EA PH+I + F+++LG+
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL
        R ++IL++LFPVPK D+ RV+TFANQ DYISFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL

Q96G21 U3 small nucleolar ribonucleoprotein protein IMP4

1.3e-88

56.51

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Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTTVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRR  RLRREYLYRK+ E  +R   E+K ++R ALEE + IPTELR E  AL+  +E +D       +H+DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTTVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GTM EA PH+I + F+++LG+
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL
        R ++IL++LFPVPK D+ RV+TFANQ DYISFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL

Arabidopsis top hits

e value

%identity

Alignment

AT1G63780.1 Ribosomal RNA processing Brix domain protein

6.6e-133

76.87

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Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTTVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF
        M RR +RL++EY+YRKSLEG ER +YE+KR IREAL+EGKPIPTELRN EA LR+EI+LED  T VPR+HIDDEYANA+E DPKIL+TTSR+PSAPL +F
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTTVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
         KELK VFPN+QR+NRG QVISEIIET R+H+FTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRH+I DKK++G MPE YPH+I NNFTT++G+
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEK-HGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        R  NILKH+FP PK D KR+VTF+NQSDYISFR+H+Y+K  GG KSIELKEIGPRFELRLYQ+KLGTV+Q EA+ EWVIRPYM T+KKRKF+G+
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEK-HGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

AT4G01560.1 Ribosomal RNA processing Brix domain protein

4.7e-38

36.42

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Query:  RREYLYRKSLEGKERLLYEKKRKIR-------EALEEGKPIPTELRNEEAALRKEIE-LEDDRTTVPRTHIDDEYANAS----------EIDPKILITTS
        +R  +Y K    K+    EK++KIR        ALE G+  P ++      + K IE   +   TV R   ++ +A+            EI PK+L+TT 
Subjt:  RREYLYRKSLEGKERLLYEKKRKIR-------EALEEGKPIPTELRNEEAALRKEIE-LEDDRTTVPRTHIDDEYANAS----------EIDPKILITTS

Query:  RDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHII
        R  S        EL  V PN+    RG   + +I+E     +FT +I+VH +R  PD L+I  LP GPTA+F L N+V R +IK+    G      P ++
Subjt:  RDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHII

Query:  LNNFTTKLGERTANILKHLFPVPKPD--TKRVVTFANQSDYISFRHHIY--------EKHGGAKSIE--LKEIGPRFELRLYQIKLGTVDQTEAQNEWVI
        LNNFTT+LG R     + LFP P P+   +RVVTF NQ D+I FRHH Y           G  ++I+  L+E GPRF L+L  ++ GT D    + EWV 
Subjt:  LNNFTTKLGERTANILKHLFPVPKPD--TKRVVTFANQSDYISFRHHIY--------EKHGGAKSIE--LKEIGPRFELRLYQIKLGTVDQTEAQNEWVI

Query:  RPYMKTTKKRKFL
        +P M T+++R FL
Subjt:  RPYMKTTKKRKFL

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTTGCGAAGAAACATTCGACTGAGGAGGGAGTATTTGTACCGAAAGAGTTTAGAAGGCAAGGAGCGTTTGCTCTATGAGAAGAAGAGGAAGATTAGAGAAGCCCTCGA
AGAGGGAAAACCTATTCCTACTGAACTCAGGAATGAGGAAGCGGCACTTCGTAAAGAAATTGAACTCGAGGATGATCGCACGACAGTCCCAAGGACACACATTGATGACG
AGTATGCAAATGCTTCAGAAATTGATCCTAAAATTTTGATAACTACATCTCGGGATCCAAGTGCACCTTTGACACAGTTTGCAAAGGAATTAAAAATTGTTTTTCCGAAT
GCACAACGAATGAATCGTGGTGGTCAGGTGATCTCAGAGATTATAGAGACCTGTCGTGCTCACGAATTTACAGATGTCATTTTAGTTCATGAACATCGTGGTGTGCCAGA
TGGTTTAATTATCAGCCACCTTCCTTTTGGTCCAACTGCATATTTTGGATTGTTGAATGTGGTTACCAGACATGAAATTAAGGACAAAAAAGCTATGGGAACGATGCCTG
AGGCCTACCCGCACATAATTTTGAATAATTTTACCACGAAGTTGGGTGAAAGGACGGCCAACATCTTAAAGCATCTATTTCCTGTGCCGAAGCCAGATACCAAACGTGTG
GTTACTTTTGCTAATCAGTCTGACTATATTTCATTCAGGCATCATATTTATGAGAAGCATGGAGGTGCTAAATCAATTGAGCTGAAGGAGATTGGTCCTCGGTTTGAATT
GCGACTGTATCAGATAAAGTTAGGAACTGTTGATCAGACGGAAGCACAGAATGAATGGGTGATTAGACCATACATGAAAACAACCAAGAAACGCAAGTTCCTTGGTGATT
GA

mRNA sequence

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Protein sequence

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MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTTVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQFAKELKIVFPN
AQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRV
VTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

Lag0029462 (gene) of Sponge gourd (AG-4) v1 genome