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Lag0029477 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029477
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein SIS2
Genome locationchr8:39371210..39373416
RNA-Seq ExpressionLag0029477
SyntenyLag0029477
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601944.1 hypothetical protein SDJN03_07177, partial [Cucurbita argyrosperma subsp. sororia]6.6e-6191.03Show/hide
Query:  MSIPIPNTSIPMARLLISTRTFPFPPLPIAPARAFFRPCRLSPAVRFSGDPSASRALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF
        M+ PIP TS  MARLLISTR FPFPPLP+ PARA FRP +LSPAVRFSGDPSA+RALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF
Subjt:  MSIPIPNTSIPMARLLISTRTFPFPPLPIAPARAFFRPCRLSPAVRFSGDPSASRALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF

Query:  LEELALNQAILEEDEENKDGSSEISFEEKPALPRTRNRPKREAEV
        LEELALNQAI+EEDEENKDGSSEISFEEKPALPRTRNRPKREAEV
Subjt:  LEELALNQAILEEDEENKDGSSEISFEEKPALPRTRNRPKREAEV

KAG7032638.1 hypothetical protein SDJN02_06688 [Cucurbita argyrosperma subsp. argyrosperma]5.0e-6191.03Show/hide
Query:  MSIPIPNTSIPMARLLISTRTFPFPPLPIAPARAFFRPCRLSPAVRFSGDPSASRALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF
        M+ PIP TS  MARLLISTR FPFPPLP+ PARAFFRP +LSPAVRFSGDPSA+RALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF
Subjt:  MSIPIPNTSIPMARLLISTRTFPFPPLPIAPARAFFRPCRLSPAVRFSGDPSASRALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF

Query:  LEELALNQAILEEDEENKDGSSEISFEEKPALPRTRNRPKREAEV
        LEELALNQAI+EEDEENKDGSSEISFE KPALPRTRNRPKREAEV
Subjt:  LEELALNQAILEEDEENKDGSSEISFEEKPALPRTRNRPKREAEV

XP_022961614.1 uncharacterized protein LOC111462310 [Cucurbita moschata]8.6e-6190.97Show/hide
Query:  MSIPIPNTSIPMARLLISTRTFPFPPLPIAPARAFFRPCRLSPAVRFSGDPSASRALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF
        M+ PIP TS  MARLLISTR FPFPPLP+ PARAFFRP +LSPAVRFSGDPSA+RALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF
Subjt:  MSIPIPNTSIPMARLLISTRTFPFPPLPIAPARAFFRPCRLSPAVRFSGDPSASRALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF

Query:  LEELALNQAILEEDEENKDGSSEISFEEKPALPRTRNRPKREAE
        LEELALNQAI+EEDEENKDGSSEI FEEKPALPRTRNRPKREAE
Subjt:  LEELALNQAILEEDEENKDGSSEISFEEKPALPRTRNRPKREAE

XP_022990673.1 uncharacterized protein LOC111487491 [Cucurbita maxima]7.5e-5788.81Show/hide
Query:  MSIPIPNTSIPMARLLISTRTFPFPPLPIAPARAFFRPCRLSPAVRFSGDPSASRALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF
        M+ PIP TS  MARLLISTR FPF   P+ PARAFFRP +LSPAVRFSGDPSA+R LRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF
Subjt:  MSIPIPNTSIPMARLLISTRTFPFPPLPIAPARAFFRPCRLSPAVRFSGDPSASRALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF

Query:  LEELALNQAILEEDEENKDGSSEISFEEKPALPRTRNRPKREA
        LEELALNQAI+EEDEENKDGSSEISFEEKPALPRTRNRPKREA
Subjt:  LEELALNQAILEEDEENKDGSSEISFEEKPALPRTRNRPKREA

XP_023525740.1 uncharacterized protein LOC111789252 [Cucurbita pepo subsp. pepo]2.1e-5994.78Show/hide
Query:  MARLLISTRTFPFPPLPIAPARAFFRPCRLSPAVRFSGDPSASRALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIL
        MARLLISTR FPFPPLP+ PARAFFRP +LSPAVRFSGDPSA+RALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAI+
Subjt:  MARLLISTRTFPFPPLPIAPARAFFRPCRLSPAVRFSGDPSASRALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIL

Query:  EEDEENKDGSSEISFEEKPALPRTRNRPKREAEV
        EEDEENKDGSSEISFEEKPALPRTRNRPKREAEV
Subjt:  EEDEENKDGSSEISFEEKPALPRTRNRPKREAEV

TrEMBL top hitse value%identityAlignment
A0A1S3CQ37 uncharacterized protein LOC1035034027.6e-4779.85Show/hide
Query:  MARLLISTRTFPFPPLPIAPARAFFRPCRLSPAVRFSGDPSASRALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIL
        MAR LISTR FPF  LP+AP RAFFRP   SP VRFS  PS SR LRVV TRAGASTSSYIFAFSIP SLIL+T LTALKIGDNLDKKFLEELALNQAI+
Subjt:  MARLLISTRTFPFPPLPIAPARAFFRPCRLSPAVRFSGDPSASRALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIL

Query:  EEDEENKDGSSEISFEEKPALPRTRNRPKREAEV
        EEDE+ +   +EISFEEKP LPRTRNRPKREAEV
Subjt:  EEDEENKDGSSEISFEEKPALPRTRNRPKREAEV

A0A6J1FJ66 uncharacterized protein LOC1114447538.7e-5185.93Show/hide
Query:  MARLLISTRT-FPFPPLPIAPARAFFRPCRLSPAVRFSGDPSASRALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAI
        MARLLISTR  FP   LP+APARAFFRP +LSPAVRF GD SA + LR+VTTRAGASTSSYIFAFSIPFSL+LVTALTALKIGDNLDKKFLEELALNQAI
Subjt:  MARLLISTRT-FPFPPLPIAPARAFFRPCRLSPAVRFSGDPSASRALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAI

Query:  LEEDEENKDGSSEISFEEKPALPRTRNRPKREAEV
        +EEDEENKD  S ISFEEKPALPRTRNRPKREAEV
Subjt:  LEEDEENKDGSSEISFEEKPALPRTRNRPKREAEV

A0A6J1HEK5 uncharacterized protein LOC1114623104.1e-6190.97Show/hide
Query:  MSIPIPNTSIPMARLLISTRTFPFPPLPIAPARAFFRPCRLSPAVRFSGDPSASRALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF
        M+ PIP TS  MARLLISTR FPFPPLP+ PARAFFRP +LSPAVRFSGDPSA+RALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF
Subjt:  MSIPIPNTSIPMARLLISTRTFPFPPLPIAPARAFFRPCRLSPAVRFSGDPSASRALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF

Query:  LEELALNQAILEEDEENKDGSSEISFEEKPALPRTRNRPKREAE
        LEELALNQAI+EEDEENKDGSSEI FEEKPALPRTRNRPKREAE
Subjt:  LEELALNQAILEEDEENKDGSSEISFEEKPALPRTRNRPKREAE

A0A6J1JTZ0 uncharacterized protein LOC1114874913.6e-5788.81Show/hide
Query:  MSIPIPNTSIPMARLLISTRTFPFPPLPIAPARAFFRPCRLSPAVRFSGDPSASRALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF
        M+ PIP TS  MARLLISTR FPF   P+ PARAFFRP +LSPAVRFSGDPSA+R LRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF
Subjt:  MSIPIPNTSIPMARLLISTRTFPFPPLPIAPARAFFRPCRLSPAVRFSGDPSASRALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF

Query:  LEELALNQAILEEDEENKDGSSEISFEEKPALPRTRNRPKREA
        LEELALNQAI+EEDEENKDGSSEISFEEKPALPRTRNRPKREA
Subjt:  LEELALNQAILEEDEENKDGSSEISFEEKPALPRTRNRPKREA

A0A6J1K146 uncharacterized protein LOC1114896903.6e-4984.44Show/hide
Query:  MARLLISTRT-FPFPPLPIAPARAFFRPCRLSPAVRFSGDPSASRALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAI
        MARLLISTR  FP   LP+ PARA FRP +LSPAVRF GD SA + LR+VTTRAGASTSSYIFAFSI FSLILVTALTALKIGDNLDKKFLEELALNQAI
Subjt:  MARLLISTRT-FPFPPLPIAPARAFFRPCRLSPAVRFSGDPSASRALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAI

Query:  LEEDEENKDGSSEISFEEKPALPRTRNRPKREAEV
        +EEDEENKD  S ISFEEKPALPRTRNRPKREAEV
Subjt:  LEEDEENKDGSSEISFEEKPALPRTRNRPKREAEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G31560.1 high chlorophyll fluorescence 1536.2e-1744.29Show/hide
Query:  MARLLISTRTFPFPPLPIAPARAFFRPCRLSPAVRF----SGDPSASRALR--VVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELA
        MARL +S    P  P  I+   +  +P    PA  F    +G    +R +R   V TRAG STSSY+ AF+IP +LI  T  T++KI D LD+ FLE++A
Subjt:  MARLLISTRTFPFPPLPIAPARAFFRPCRLSPAVRF----SGDPSASRALR--VVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELA

Query:  LNQAILEEDEENKDGSSEISFE---EKPALPRTRNRPKRE
        LNQAI +  E+ ++G  +IS +   ++P L RTRNRPKRE
Subjt:  LNQAILEEDEENKDGSSEISFE---EKPALPRTRNRPKRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATTCCAATTCCCAACACTTCCATACCTATGGCGAGGCTCCTTATCTCGACCCGAACCTTCCCTTTTCCTCCTCTTCCCATCGCTCCGGCACGGGCGTTCTTCAG
ACCCTGCAGATTGTCGCCGGCGGTCAGATTCTCCGGCGACCCATCGGCCTCCAGAGCCCTACGAGTCGTGACGACTCGTGCCGGCGCCAGTACCAGTAGTTACATCTTCG
CCTTCTCTATCCCTTTCTCTCTTATTCTCGTCACTGCCCTCACTGCTCTTAAAATCGGCGATAACCTCGACAAGAAGTTTCTTGAGGAGCTTGCTCTTAACCAAGCCATC
CTGGAGGAAGATGAGGAGAACAAAGATGGTAGTTCAGAAATATCTTTTGAAGAAAAACCAGCTCTTCCACGAACTCGAAACCGCCCTAAAAGGGAAGCTGAGGTTTTGTT
CTTTACTGCACTCCTAAAGTATTCTACTATCAAGTTGAAGATCAATCTAGCCATGGAAAGGTTTGAAGTGTTTCTTCATTATCTACCTGTAGTGTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCATTCCAATTCCCAACACTTCCATACCTATGGCGAGGCTCCTTATCTCGACCCGAACCTTCCCTTTTCCTCCTCTTCCCATCGCTCCGGCACGGGCGTTCTTCAG
ACCCTGCAGATTGTCGCCGGCGGTCAGATTCTCCGGCGACCCATCGGCCTCCAGAGCCCTACGAGTCGTGACGACTCGTGCCGGCGCCAGTACCAGTAGTTACATCTTCG
CCTTCTCTATCCCTTTCTCTCTTATTCTCGTCACTGCCCTCACTGCTCTTAAAATCGGCGATAACCTCGACAAGAAGTTTCTTGAGGAGCTTGCTCTTAACCAAGCCATC
CTGGAGGAAGATGAGGAGAACAAAGATGGTAGTTCAGAAATATCTTTTGAAGAAAAACCAGCTCTTCCACGAACTCGAAACCGCCCTAAAAGGGAAGCTGAGGTTTTGTT
CTTTACTGCACTCCTAAAGTATTCTACTATCAAGTTGAAGATCAATCTAGCCATGGAAAGGTTTGAAGTGTTTCTTCATTATCTACCTGTAGTGTCATGA
Protein sequenceShow/hide protein sequence
MSIPIPNTSIPMARLLISTRTFPFPPLPIAPARAFFRPCRLSPAVRFSGDPSASRALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAI
LEEDEENKDGSSEISFEEKPALPRTRNRPKREAEVLFFTALLKYSTIKLKINLAMERFEVFLHYLPVVS