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Lag0029493 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029493
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTRAF-like family protein
Genome locationchr8:39511597..39512520
RNA-Seq ExpressionLag0029493
SyntenyLag0029493
Gene Ontology termsGO:0005515 - protein binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR002083 - MATH/TRAF domain
IPR008974 - TRAF-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050214.1 MATH domain and coiled-coil domain-containing protein [Cucumis melo var. makuwa]4.7e-4067.44Show/hide
Query:  YFWKLALYPNGDDKRNGSHHISLYLVMAEDDVLWTTTSTSEVNVMFTFLVYDHLKDKYLIVHDGKVRRFHAIKKEWGFEKLVSLDTFNDALNGLLVDDCC
        Y WKLA+YPNGD++RNGS+HISLYLV AED+      +TSEVNV FTFLVYD LKD+Y+   DGKVRRFHA+KKEWGFEKLVSLDTFND  NGLLVDDCC
Subjt:  YFWKLALYPNGDDKRNGSHHISLYLVMAEDDVLWTTTSTSEVNVMFTFLVYDHLKDKYLIVHDGKVRRFHAIKKEWGFEKLVSLDTFNDALNGLLVDDCC

Query:  VFGVDVIVDK-KDAQHSQMTSQSQPTSST
         FGVD+IV K  D +   ++   QP + T
Subjt:  VFGVDVIVDK-KDAQHSQMTSQSQPTSST

XP_022146379.1 ubiquitin carboxyl-terminal hydrolase 12-like [Momordica charantia]3.9e-3976.58Show/hide
Query:  YFWKLALYPNGDDKRNGSH-HISLYLVMAEDDVLWTTTSTSEVNVMFTFLVYDHLKDKYLIVHDGKVRRFHAIKKEWGFEKLVSLDTFNDALNGLLVDDC
        Y WKLA+YP GD KRNGSH HISLYLV AEDD+      TSEVNV+FTFLVYD LKDKYL V DG VRRFHAIK EWGFEKL+SLDTFND+ NG LVDDC
Subjt:  YFWKLALYPNGDDKRNGSH-HISLYLVMAEDDVLWTTTSTSEVNVMFTFLVYDHLKDKYLIVHDGKVRRFHAIKKEWGFEKLVSLDTFNDALNGLLVDDC

Query:  CVFGVDVIVDK
        C FGVDV+V K
Subjt:  CVFGVDVIVDK

XP_022146382.1 uncharacterized protein LOC111015610 [Momordica charantia]8.2e-3763.2Show/hide
Query:  WKLALYPNGDDKRNGSHHISLYLVMAEDDVLWTTTSTSEVNVMFTFLVYDHLKDKYLIVHDGKVRRFHAIKKEWGFEKLVSLDTFNDALNGLLVDDCCVF
        WKLA+YP+GD KRNGS+HISLYLV AEDD+      T ++ V+FT LVYD+L+D YL V DGKVRRFHA+KKEWGFEKLVSL+TFND+ NG LVDDCC F
Subjt:  WKLALYPNGDDKRNGSHHISLYLVMAEDDVLWTTTSTSEVNVMFTFLVYDHLKDKYLIVHDGKVRRFHAIKKEWGFEKLVSLDTFNDALNGLLVDDCCVF

Query:  GVDVIVDKKDAQHSQMTSQSQPTSS
        GVD+ V K D +   ++   QP ++
Subjt:  GVDVIVDKKDAQHSQMTSQSQPTSS

XP_022146383.1 uncharacterized protein LOC111015611 [Momordica charantia]1.8e-3669.37Show/hide
Query:  WKLALYPNGDDKRNGSHHISLYLVMAEDDVLWTTTSTSEVNVMFTFLVYDHLKDKYLIVHDGKVRRFHAIKKEWGFEKLVSLDTFNDALNGLLVDDCCVF
        WKLALYPNGD  RNGS +ISLYLV AED+++   ++TSEVNV+ TFLVYD+L+D YL V DGKVRRFHA+K EWGF KLVSL+TFND+ NG LVDDCC F
Subjt:  WKLALYPNGDDKRNGSHHISLYLVMAEDDVLWTTTSTSEVNVMFTFLVYDHLKDKYLIVHDGKVRRFHAIKKEWGFEKLVSLDTFNDALNGLLVDDCCVF

Query:  GVDVIVDKKDA
        GVD+ V K ++
Subjt:  GVDVIVDKKDA

XP_038874970.1 uncharacterized protein LOC120067490 [Benincasa hispida]6.3e-3767.5Show/hide
Query:  YFWKLALYPNGDDKRNGSHHISLYLVMAEDDVLWTTTSTSEVNVMFTFLVYDHLKDKYLIVHDGKVRRFHAIKKEWGFEKLVSLDTFNDALNGLLVDDCC
        Y WKLALYPNGD KRN ++HISLYLV AED++   ++S  E+ VM  FLVYD+LKD+Y  + DGKVR FHAIKKEWGFEKLVSLDTFND  NGLLVDDCC
Subjt:  YFWKLALYPNGDDKRNGSHHISLYLVMAEDDVLWTTTSTSEVNVMFTFLVYDHLKDKYLIVHDGKVRRFHAIKKEWGFEKLVSLDTFNDALNGLLVDDCC

Query:  VFGVDVIVDKKDAQHSQMTS
         FGVDVIV K    ++++ S
Subjt:  VFGVDVIVDKKDAQHSQMTS

TrEMBL top hitse value%identityAlignment
A0A5D3BGH9 MATH domain and coiled-coil domain-containing protein2.3e-4067.44Show/hide
Query:  YFWKLALYPNGDDKRNGSHHISLYLVMAEDDVLWTTTSTSEVNVMFTFLVYDHLKDKYLIVHDGKVRRFHAIKKEWGFEKLVSLDTFNDALNGLLVDDCC
        Y WKLA+YPNGD++RNGS+HISLYLV AED+      +TSEVNV FTFLVYD LKD+Y+   DGKVRRFHA+KKEWGFEKLVSLDTFND  NGLLVDDCC
Subjt:  YFWKLALYPNGDDKRNGSHHISLYLVMAEDDVLWTTTSTSEVNVMFTFLVYDHLKDKYLIVHDGKVRRFHAIKKEWGFEKLVSLDTFNDALNGLLVDDCC

Query:  VFGVDVIVDK-KDAQHSQMTSQSQPTSST
         FGVD+IV K  D +   ++   QP + T
Subjt:  VFGVDVIVDK-KDAQHSQMTSQSQPTSST

A0A6J1CXZ0 ubiquitin carboxyl-terminal hydrolase 12-like1.9e-3976.58Show/hide
Query:  YFWKLALYPNGDDKRNGSH-HISLYLVMAEDDVLWTTTSTSEVNVMFTFLVYDHLKDKYLIVHDGKVRRFHAIKKEWGFEKLVSLDTFNDALNGLLVDDC
        Y WKLA+YP GD KRNGSH HISLYLV AEDD+      TSEVNV+FTFLVYD LKDKYL V DG VRRFHAIK EWGFEKL+SLDTFND+ NG LVDDC
Subjt:  YFWKLALYPNGDDKRNGSH-HISLYLVMAEDDVLWTTTSTSEVNVMFTFLVYDHLKDKYLIVHDGKVRRFHAIKKEWGFEKLVSLDTFNDALNGLLVDDC

Query:  CVFGVDVIVDK
        C FGVDV+V K
Subjt:  CVFGVDVIVDK

A0A6J1CYF6 uncharacterized protein LOC1110156118.9e-3769.37Show/hide
Query:  WKLALYPNGDDKRNGSHHISLYLVMAEDDVLWTTTSTSEVNVMFTFLVYDHLKDKYLIVHDGKVRRFHAIKKEWGFEKLVSLDTFNDALNGLLVDDCCVF
        WKLALYPNGD  RNGS +ISLYLV AED+++   ++TSEVNV+ TFLVYD+L+D YL V DGKVRRFHA+K EWGF KLVSL+TFND+ NG LVDDCC F
Subjt:  WKLALYPNGDDKRNGSHHISLYLVMAEDDVLWTTTSTSEVNVMFTFLVYDHLKDKYLIVHDGKVRRFHAIKKEWGFEKLVSLDTFNDALNGLLVDDCCVF

Query:  GVDVIVDKKDA
        GVD+ V K ++
Subjt:  GVDVIVDKKDA

A0A6J1CZ69 ubiquitin carboxyl-terminal hydrolase 13-like1.2e-3662.2Show/hide
Query:  YFWKLALYPNGDDKRNGSHHISLYLVMAEDDVLWTTTSTSEVNVMFTFLVYDHLKDKYLIVHDGKVRRFHAIKKEWGFEKLVSLDTFNDALNGLLVDDCC
        Y WKLA+YPNGD KRNGS HISLYLV AED +      TSEVNV+FTFLVYD+L DKYL V D KVRRFH+I+ EW FEKL+SL+TFND+ NG LV DCC
Subjt:  YFWKLALYPNGDDKRNGSHHISLYLVMAEDDVLWTTTSTSEVNVMFTFLVYDHLKDKYLIVHDGKVRRFHAIKKEWGFEKLVSLDTFNDALNGLLVDDCC

Query:  VFGVDVIVDKKDAQHSQMTSQSQPTSS
         FGVD++V K D +   ++   +P ++
Subjt:  VFGVDVIVDKKDAQHSQMTSQSQPTSS

A0A6J1CZF7 uncharacterized protein LOC1110156104.0e-3763.2Show/hide
Query:  WKLALYPNGDDKRNGSHHISLYLVMAEDDVLWTTTSTSEVNVMFTFLVYDHLKDKYLIVHDGKVRRFHAIKKEWGFEKLVSLDTFNDALNGLLVDDCCVF
        WKLA+YP+GD KRNGS+HISLYLV AEDD+      T ++ V+FT LVYD+L+D YL V DGKVRRFHA+KKEWGFEKLVSL+TFND+ NG LVDDCC F
Subjt:  WKLALYPNGDDKRNGSHHISLYLVMAEDDVLWTTTSTSEVNVMFTFLVYDHLKDKYLIVHDGKVRRFHAIKKEWGFEKLVSLDTFNDALNGLLVDDCCVF

Query:  GVDVIVDKKDAQHSQMTSQSQPTSS
        GVD+ V K D +   ++   QP ++
Subjt:  GVDVIVDKKDAQHSQMTSQSQPTSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G04170.1 TRAF-like family protein7.0e-1838.58Show/hide
Query:  YFWKLALYPNGDDKRNGSHHISLYLVMAEDDVLWTTTSTSEVNVMFTFLVYDHLKDKYLIVHDGKVRRFHAIKKEWGFEKLVSLDTFNDALNGLLVDDCC
        Y W+L LY NG+    G++HISLY+ + E + L       EVNV     VY+  + KYLIV DG V+R++  KKEWG+ KL+ L TF D   G L  D  
Subjt:  YFWKLALYPNGDDKRNGSHHISLYLVMAEDDVLWTTTSTSEVNVMFTFLVYDHLKDKYLIVHDGKVRRFHAIKKEWGFEKLVSLDTFNDALNGLLVDDCC

Query:  VFGVDVIVDKKDAQHSQMTSQSQPTSS
         FG ++          ++T  S P ++
Subjt:  VFGVDVIVDKKDAQHSQMTSQSQPTSS

AT2G04170.2 TRAF-like family protein7.0e-1838.58Show/hide
Query:  YFWKLALYPNGDDKRNGSHHISLYLVMAEDDVLWTTTSTSEVNVMFTFLVYDHLKDKYLIVHDGKVRRFHAIKKEWGFEKLVSLDTFNDALNGLLVDDCC
        Y W+L LY NG+    G++HISLY+ + E + L       EVNV     VY+  + KYLIV DG V+R++  KKEWG+ KL+ L TF D   G L  D  
Subjt:  YFWKLALYPNGDDKRNGSHHISLYLVMAEDDVLWTTTSTSEVNVMFTFLVYDHLKDKYLIVHDGKVRRFHAIKKEWGFEKLVSLDTFNDALNGLLVDDCC

Query:  VFGVDVIVDKKDAQHSQMTSQSQPTSS
         FG ++          ++T  S P ++
Subjt:  VFGVDVIVDKKDAQHSQMTSQSQPTSS

AT2G15710.1 TRAF-like family protein3.1e-1840.37Show/hide
Query:  YFWKLALYPNGDDKRNGSHHISLYLVMAEDDVLWTTTSTSEVNVMFTFLVYDHLKDKYLIVHDGKVRRFHAIKKEWGFEKLVSLDTFNDALNGLLVD-DC
        Y W+L +YP G++K  GS  IS+Y+    D+   ++TS  EV     F VY+  ++KY  + D +V+RF+A++  WG  +++SL+TFND  NG   + + 
Subjt:  YFWKLALYPNGDDKRNGSHHISLYLVMAEDDVLWTTTSTSEVNVMFTFLVYDHLKDKYLIVHDGKVRRFHAIKKEWGFEKLVSLDTFNDALNGLLVD-DC

Query:  CVFGVDVIV
        C FGVDV+V
Subjt:  CVFGVDVIV

AT3G17380.1 TRAF-like family protein6.5e-2445.95Show/hide
Query:  YFWKLALYPNGDDKRNGSHHISLYLVMAEDDVLWTTTSTSEVNVMFTFLVYDHLKDKYLIVHDGKVRRFHAIKKEWGFEKLVSLDTFNDALNGLLVDDCC
        Y WKL LYPNG+  +N   H+S+YL +A+   L   +   EV  +F   + D  KD YLI+  G  RRFH++K+EWGF+K +   TF+DA NG L++D C
Subjt:  YFWKLALYPNGDDKRNGSHHISLYLVMAEDDVLWTTTSTSEVNVMFTFLVYDHLKDKYLIVHDGKVRRFHAIKKEWGFEKLVSLDTFNDALNGLLVDDCC

Query:  VFGVDVIVDKK
        +FG DV V K+
Subjt:  VFGVDVIVDKK

AT3G20360.1 TRAF-like family protein9.7e-2045.87Show/hide
Query:  YFWKLALYPNGDDKRNGSHHISLYLVMAEDDVLWTTTSTSEVNVMFTFLVYDHLKDKYLIVHDGKVRRFHAIKKEWGFEKLVSLDTFNDALNGLLVD-DC
        Y W L +YP G+   NG+ HISLY+V+   D    T+ + EV+V   F V++  + KY  + D  V RF AIK+ WGF K++ L TFN+  NG L D D 
Subjt:  YFWKLALYPNGDDKRNGSHHISLYLVMAEDDVLWTTTSTSEVNVMFTFLVYDHLKDKYLIVHDGKVRRFHAIKKEWGFEKLVSLDTFNDALNGLLVD-DC

Query:  CVFGVDVIV
        C FGVDVI+
Subjt:  CVFGVDVIV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACAGGCAGAGACATGGAAAAGAAAAGGAAGACGAACGACAACTTCTCTCCTTATCCCACACCAAACCCACATTCTGCTTCTACTACTTCTGGAAATTAGCTCTCTATCC
CAACGGAGATGACAAAAGAAATGGTTCCCATCATATCTCCCTCTATTTGGTAATGGCTGAGGATGACGTTCTATGGACTACTACTTCTACTTCCGAGGTTAATGTCATGT
TCACATTTCTTGTTTACGATCATCTCAAAGACAAATATTTGATAGTCCACGATGGGAAAGTAAGACGTTTTCATGCAATCAAGAAAGAGTGGGGTTTTGAAAAGTTGGTT
TCACTTGACACTTTCAATGATGCTTTAAATGGATTGTTGGTTGACGATTGTTGTGTATTTGGAGTTGACGTTATTGTTGATAAAAAAGATGCCCAACACTCCCAAATGAC
ATCACAGTCACAACCAACAAGTAGCACATGTTCAGCCACGTGTACGTGTTCTCAGCAAAATCAACCACGTGTTTAG
mRNA sequenceShow/hide mRNA sequence
AACAGGCAGAGACATGGAAAAGAAAAGGAAGACGAACGACAACTTCTCTCCTTATCCCACACCAAACCCACATTCTGCTTCTACTACTTCTGGAAATTAGCTCTCTATCC
CAACGGAGATGACAAAAGAAATGGTTCCCATCATATCTCCCTCTATTTGGTAATGGCTGAGGATGACGTTCTATGGACTACTACTTCTACTTCCGAGGTTAATGTCATGT
TCACATTTCTTGTTTACGATCATCTCAAAGACAAATATTTGATAGTCCACGATGGGAAAGTAAGACGTTTTCATGCAATCAAGAAAGAGTGGGGTTTTGAAAAGTTGGTT
TCACTTGACACTTTCAATGATGCTTTAAATGGATTGTTGGTTGACGATTGTTGTGTATTTGGAGTTGACGTTATTGTTGATAAAAAAGATGCCCAACACTCCCAAATGAC
ATCACAGTCACAACCAACAAGTAGCACATGTTCAGCCACGTGTACGTGTTCTCAGCAAAATCAACCACGTGTTTAG
Protein sequenceShow/hide protein sequence
NRQRHGKEKEDERQLLSLSHTKPTFCFYYFWKLALYPNGDDKRNGSHHISLYLVMAEDDVLWTTTSTSEVNVMFTFLVYDHLKDKYLIVHDGKVRRFHAIKKEWGFEKLV
SLDTFNDALNGLLVDDCCVFGVDVIVDKKDAQHSQMTSQSQPTSSTCSATCTCSQQNQPRV