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Lag0029501 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029501
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr8:39558087..39558392
RNA-Seq ExpressionLag0029501
SyntenyLag0029501
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037436.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.9e-0935.71Show/hide
Query:  GPLYQALPRLFALSSRKNMIVSDAWDHTTSSWKLYPRRPLFDREAFAQAECASSFPVPALSRGADHMLWNPDSKGRFSVASTRQ
        G L    PRL+ LS  +N  + + WD  T+ W L+PRRPL DRE            +  L+ G ++M+W P+ KG ++ AS ++
Subjt:  GPLYQALPRLFALSSRKNMIVSDAWDHTTSSWKLYPRRPLFDREAFAQAECASSFPVPALSRGADHMLWNPDSKGRFSVASTRQ

KAA0045138.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.9e-0942.17Show/hide
Query:  GPLYQALPRLFALSSRKNMIVSDAWDHTTSSWKLYPRRPLFDREAFAQAECASSFPVPALSRGADHMLWNPDSKGRFSVASTR
        G L  A PRLFAL+  K + V DAW+   + W +  RR L DRE    A+     P P  +RG+  + WNPDS   FS+AS +
Subjt:  GPLYQALPRLFALSSRKNMIVSDAWDHTTSSWKLYPRRPLFDREAFAQAECASSFPVPALSRGADHMLWNPDSKGRFSVASTR

KAA0058105.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]4.3e-0938.95Show/hide
Query:  GPLYQALPRLFALSSRKNMIVSDAWDHTTSSWKLYPRRPLFDREAFAQAECASSFPVPALSRGADHMLWNPDSKGRFSVASTRQFYWNMSSPDRP
        G L  A PRLFALS  K   + D W+   + W++  RR L DRE     +   + P+P  +RG     W PDSK  FS+AS +        PDRP
Subjt:  GPLYQALPRLFALSSRKNMIVSDAWDHTTSSWKLYPRRPLFDREAFAQAECASSFPVPALSRGADHMLWNPDSKGRFSVASTRQFYWNMSSPDRP

KAA0058554.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.2e-0838.37Show/hide
Query:  TNHGPLYQALPRLFALSSRKNMIVSDAWDHTTSSWKLYPRRPLFDREAFAQAECASSFPVPALSRGADHMLWNPDSKGRFSVASTR
        +  G L  A PRLFALS  K   + D W+   + W++  RR L DRE     +   + P+P  +RG     W PDSK  FS+AS +
Subjt:  TNHGPLYQALPRLFALSSRKNMIVSDAWDHTTSSWKLYPRRPLFDREAFAQAECASSFPVPALSRGADHMLWNPDSKGRFSVASTR

TYK00226.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.9e-0935.71Show/hide
Query:  GPLYQALPRLFALSSRKNMIVSDAWDHTTSSWKLYPRRPLFDREAFAQAECASSFPVPALSRGADHMLWNPDSKGRFSVASTRQ
        G L    PRL+ LS  +N  + + WD  T+ W L+PRRPL DRE            +  L+ G ++M+W P+ KG ++ AS ++
Subjt:  GPLYQALPRLFALSSRKNMIVSDAWDHTTSSWKLYPRRPLFDREAFAQAECASSFPVPALSRGADHMLWNPDSKGRFSVASTRQ

TrEMBL top hitse value%identityAlignment
A0A5A7T5L3 LINE-1 retrotransposable element ORF2 protein9.3e-1035.71Show/hide
Query:  GPLYQALPRLFALSSRKNMIVSDAWDHTTSSWKLYPRRPLFDREAFAQAECASSFPVPALSRGADHMLWNPDSKGRFSVASTRQ
        G L    PRL+ LS  +N  + + WD  T+ W L+PRRPL DRE            +  L+ G ++M+W P+ KG ++ AS ++
Subjt:  GPLYQALPRLFALSSRKNMIVSDAWDHTTSSWKLYPRRPLFDREAFAQAECASSFPVPALSRGADHMLWNPDSKGRFSVASTRQ

A0A5A7TQI1 LINE-1 retrotransposable element ORF2 protein9.3e-1042.17Show/hide
Query:  GPLYQALPRLFALSSRKNMIVSDAWDHTTSSWKLYPRRPLFDREAFAQAECASSFPVPALSRGADHMLWNPDSKGRFSVASTR
        G L  A PRLFAL+  K + V DAW+   + W +  RR L DRE    A+     P P  +RG+  + WNPDS   FS+AS +
Subjt:  GPLYQALPRLFALSSRKNMIVSDAWDHTTSSWKLYPRRPLFDREAFAQAECASSFPVPALSRGADHMLWNPDSKGRFSVASTR

A0A5A7UTS4 LINE-1 retrotransposable element ORF2 protein6.0e-0938.37Show/hide
Query:  TNHGPLYQALPRLFALSSRKNMIVSDAWDHTTSSWKLYPRRPLFDREAFAQAECASSFPVPALSRGADHMLWNPDSKGRFSVASTR
        +  G L  A PRLFALS  K   + D W+   + W++  RR L DRE     +   + P+P  +RG     W PDSK  FS+AS +
Subjt:  TNHGPLYQALPRLFALSSRKNMIVSDAWDHTTSSWKLYPRRPLFDREAFAQAECASSFPVPALSRGADHMLWNPDSKGRFSVASTR

A0A5A7UWW1 LINE-1 retrotransposable element ORF2 protein2.1e-0938.95Show/hide
Query:  GPLYQALPRLFALSSRKNMIVSDAWDHTTSSWKLYPRRPLFDREAFAQAECASSFPVPALSRGADHMLWNPDSKGRFSVASTRQFYWNMSSPDRP
        G L  A PRLFALS  K   + D W+   + W++  RR L DRE     +   + P+P  +RG     W PDSK  FS+AS +        PDRP
Subjt:  GPLYQALPRLFALSSRKNMIVSDAWDHTTSSWKLYPRRPLFDREAFAQAECASSFPVPALSRGADHMLWNPDSKGRFSVASTRQFYWNMSSPDRP

A0A5D3BPP1 LINE-1 retrotransposable element ORF2 protein9.3e-1035.71Show/hide
Query:  GPLYQALPRLFALSSRKNMIVSDAWDHTTSSWKLYPRRPLFDREAFAQAECASSFPVPALSRGADHMLWNPDSKGRFSVASTRQ
        G L    PRL+ LS  +N  + + WD  T+ W L+PRRPL DRE            +  L+ G ++M+W P+ KG ++ AS ++
Subjt:  GPLYQALPRLFALSSRKNMIVSDAWDHTTSSWKLYPRRPLFDREAFAQAECASSFPVPALSRGADHMLWNPDSKGRFSVASTRQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGGGACCAATCATGGGCCATTATATCAAGCCCTCCCTCGCCTTTTTGCGCTGTCCAGTAGGAAAAATATGATTGTCTCGGATGCCTGGGACCACACCACTTCATC
GTGGAAGCTTTATCCTAGACGCCCTTTGTTCGACAGGGAGGCCTTTGCTCAGGCGGAATGTGCTTCCTCCTTTCCAGTTCCTGCATTATCTAGAGGGGCGGACCACATGC
TTTGGAACCCGGACTCCAAGGGACGCTTCTCCGTTGCTTCAACTAGGCAATTCTATTGGAATATGTCATCGCCAGATCGGCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTGGGACCAATCATGGGCCATTATATCAAGCCCTCCCTCGCCTTTTTGCGCTGTCCAGTAGGAAAAATATGATTGTCTCGGATGCCTGGGACCACACCACTTCATC
GTGGAAGCTTTATCCTAGACGCCCTTTGTTCGACAGGGAGGCCTTTGCTCAGGCGGAATGTGCTTCCTCCTTTCCAGTTCCTGCATTATCTAGAGGGGCGGACCACATGC
TTTGGAACCCGGACTCCAAGGGACGCTTCTCCGTTGCTTCAACTAGGCAATTCTATTGGAATATGTCATCGCCAGATCGGCCTTAG
Protein sequenceShow/hide protein sequence
MPGTNHGPLYQALPRLFALSSRKNMIVSDAWDHTTSSWKLYPRRPLFDREAFAQAECASSFPVPALSRGADHMLWNPDSKGRFSVASTRQFYWNMSSPDRP