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Lag0029505 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029505
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionubiquitin carboxyl-terminal hydrolase 12-like
Genome locationchr8:39587192..39588508
RNA-Seq ExpressionLag0029505
SyntenyLag0029505
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002083 - MATH/TRAF domain
IPR008974 - TRAF-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648447.1 hypothetical protein Csa_008888 [Cucumis sativus]4.4e-4243.55Show/hide
Query:  MLKIAVASSKNQRFESHTFKARAV---INVYPNGDETRNGSNYISLYLVMVEDNILSTTSEINVVFTFLVYDYLKDKW---ENGKTRRFGAMKTEWGFEN
        +LK  +A S  QRFES  F A      + +YPNGD+ R+ S++ISLYLVMV DNILSTTSE+N VFTFLVYD L+ K+   ++GK RRF A KTEWG E 
Subjt:  MLKIAVASSKNQRFESHTFKARAV---INVYPNGDETRNGSNYISLYLVMVEDNILSTTSEINVVFTFLVYDYLKDKW---ENGKTRRFGAMKTEWGFEN

Query:  LLSPDTFNDASKGFLVDDCCVFGVDIFVMN-----------------------------------------LESYRWKLWLYPKGCSQAMSGFLSLYLVL
        LL  +TF DAS GFLVDDCCVFGVDIFVMN                                         +E+  WK+ L+P G  QA  GF S+YL+L
Subjt:  LLSPDTFNDASKGFLVDDCCVFGVDIFVMN-----------------------------------------LESYRWKLWLYPKGCSQAMSGFLSLYLVL

Query:  DGMKGLPQSSRV-----------------------CWFGFDGVKGAAG
          +K  PQ ++V                       CWFGF G++   G
Subjt:  DGMKGLPQSSRV-----------------------CWFGFDGVKGAAG

TYJ98189.1 MATH domain and coiled-coil domain-containing protein [Cucumis melo var. makuwa]1.5e-3746.48Show/hide
Query:  MLKIAVASSKNQRFESHTFKARA---VINVYPNGDETRNGSNYISLYLVMVEDNILSTTSEINVVFTFLVYDYLKDKW---ENGKTRRFGAMKTEWGFEN
        +LK AVASS  QRFES  F A      + +YPNGD+ R+ S++ISLYLV VE+NILSTTSE+NVVFTFLVYD L+ K+   ++ K R+F A K EWG E 
Subjt:  MLKIAVASSKNQRFESHTFKARA---VINVYPNGDETRNGSNYISLYLVMVEDNILSTTSEINVVFTFLVYDYLKDKW---ENGKTRRFGAMKTEWGFEN

Query:  LLSPDTFNDASKGFLVDDCCVFGVDIFVMN------------------------------------------LESYRWKLWLYPKGCSQAMSGFLSLYLV
        LL  +TF+DAS GFLVDDCCVFGVDIFVMN                                          +E+  WK+ L+P G  QA  GF S+YL+
Subjt:  LLSPDTFNDASKGFLVDDCCVFGVDIFVMN------------------------------------------LESYRWKLWLYPKGCSQAMSGFLSLYLV

Query:  LDGMKGLPQSSRV
        L  +   P+ ++V
Subjt:  LDGMKGLPQSSRV

XP_022146379.1 ubiquitin carboxyl-terminal hydrolase 12-like [Momordica charantia]8.4e-4961.63Show/hide
Query:  MLKIAVASSKNQRFESHTFKA---RAVINVYPNGDETRNGS-NYISLYLVMVEDNILSTTSEINVVFTFLVYDYLKDKW---ENGKTRRFGAMKTEWGFE
        +LK A+  S   R+ES  F A   +  + +YP GD  RNGS ++ISLYLV  ED+I   TSE+NVVFTFLVYD LKDK+   ++G  RRF A+KTEWGFE
Subjt:  MLKIAVASSKNQRFESHTFKA---RAVINVYPNGDETRNGS-NYISLYLVMVEDNILSTTSEINVVFTFLVYDYLKDKW---ENGKTRRFGAMKTEWGFE

Query:  NLLSPDTFNDASKGFLVDDCCVFGVDIFVMNLESYRWKLWLYPKGCSQAMSGFLSLYLVLDGMKGLPQSSRV
         L+S DTFND+S GFLVDDCC FGVD+ VM LE YRWKLWLYPKGCS A +GFLSLYL+LD  K + Q S+V
Subjt:  NLLSPDTFNDASKGFLVDDCCVFGVDIFVMNLESYRWKLWLYPKGCSQAMSGFLSLYLVLDGMKGLPQSSRV

XP_022146383.1 uncharacterized protein LOC111015611 [Momordica charantia]4.0e-5154.11Show/hide
Query:  MLKIAVASSKNQRFESHTFKA---RAVINVYPNGDETRNGSNYISLYLVMVEDNILSTTSEINVVFTFLVYDYLKDKW---ENGKTRRFGAMKTEWGFEN
        +LK A+A+   +R+ES  F     +  + +YPNGD+ RNGS YISLYLV  ED I+S TSE+NVV TFLVYD L+D +    +GK RRF AMKTEWGF  
Subjt:  MLKIAVASSKNQRFESHTFKA---RAVINVYPNGDETRNGSNYISLYLVMVEDNILSTTSEINVVFTFLVYDYLKDKW---ENGKTRRFGAMKTEWGFEN

Query:  LLSPDTFNDASKGFLVDDCCVFGVDIFVMNLESYRWKLWLYPKGCSQAMSGFLSLYLVLDGMKG-LPQSSRV----------------------CWFGFD
        L+S +TFND+S GFLVDDCC FGVDIFVM LESYRWK+ L+PKGCSQ  +GFLSLYL+ D  K  LPQ  RV                      CWF F 
Subjt:  LLSPDTFNDASKGFLVDDCCVFGVDIFVMNLESYRWKLWLYPKGCSQAMSGFLSLYLVLDGMKG-LPQSSRV----------------------CWFGFD

Query:  GVKGAAG
        G++   G
Subjt:  GVKGAAG

XP_038875772.1 uncharacterized protein LOC120068142 [Benincasa hispida]2.8e-5249.8Show/hide
Query:  MLKIAVASSKNQRFESHTFKARAV---INVYPNGDETRNGSNYISLYLVMVEDNILSTTSEINVVFTFLVYDYLKDKW---ENGKTRRFGAMKTEWGFEN
        +LK  +ASS+ QRFES  F A      + +YPNGDE RN SN+ISLYLV+V +NILSTTSE+NVVFTFLVYD L+ K+   ++GK RRF AMKTEWG E 
Subjt:  MLKIAVASSKNQRFESHTFKARAV---INVYPNGDETRNGSNYISLYLVMVEDNILSTTSEINVVFTFLVYDYLKDKW---ENGKTRRFGAMKTEWGFEN

Query:  LLSPDTFNDASKGFLVDDCCVFGVDIFVMN-----------------------------------------LESYRWKLWLYPKGCSQAMSGFLSLYLVL
        LL  DTFNDAS GFLVDDCCVFGVDIFVM+                                         +ESYRWK+ LYP GCS+A SGFLS+YL+ 
Subjt:  LLSPDTFNDASKGFLVDDCCVFGVDIFVMN-----------------------------------------LESYRWKLWLYPKGCSQAMSGFLSLYLVL

Query:  DGMKGLPQSSRV----------------------CWFGFDGVKGAAG
        D    LPQ S+V                      CWFGFDGV+   G
Subjt:  DGMKGLPQSSRV----------------------CWFGFDGVKGAAG

TrEMBL top hitse value%identityAlignment
A0A0A0KND8 Uncharacterized protein9.0e-4147.64Show/hide
Query:  MLKIAVASSKNQRFESHTFKARAV---INVYPNGDETRNGSNYISLYLVMVEDNILSTTSEINVVFTFLVYDYLKDKW---ENGKTRRFGAMKTEWGFEN
        +LK  +A S  QRFES  F A      + +YPNGD+ R+ S++ISLYLVMV DNILSTTSE+N VFTFLVYD L+ K+   ++GK RRF A KTEWG E 
Subjt:  MLKIAVASSKNQRFESHTFKARAV---INVYPNGDETRNGSNYISLYLVMVEDNILSTTSEINVVFTFLVYDYLKDKW---ENGKTRRFGAMKTEWGFEN

Query:  LLSPDTFNDASKGFLVDDCCVFGVDIFVMN-----------------------------------------LESYRWKLWLYPKGCSQAMSGFLSLYLVL
        LL  +TF DAS GFLVDDCCVFGVDIFVMN                                         +E+  WK+ L+P G  QA  GF S+YL+L
Subjt:  LLSPDTFNDASKGFLVDDCCVFGVDIFVMN-----------------------------------------LESYRWKLWLYPKGCSQAMSGFLSLYLVL

Query:  DGMKGLPQSSRV
          +K  PQ ++V
Subjt:  DGMKGLPQSSRV

A0A5A7U9P8 MATH domain and coiled-coil domain-containing protein7.2e-3846.48Show/hide
Query:  MLKIAVASSKNQRFESHTFKARA---VINVYPNGDETRNGSNYISLYLVMVEDNILSTTSEINVVFTFLVYDYLKDKW---ENGKTRRFGAMKTEWGFEN
        +LK AVASS  QRFES  F A      + +YPNGD+ R+ S++ISLYLV VE+NILSTTSE+NVVFTFLVYD L+ K+   ++ K R+F A K EWG E 
Subjt:  MLKIAVASSKNQRFESHTFKARA---VINVYPNGDETRNGSNYISLYLVMVEDNILSTTSEINVVFTFLVYDYLKDKW---ENGKTRRFGAMKTEWGFEN

Query:  LLSPDTFNDASKGFLVDDCCVFGVDIFVMN------------------------------------------LESYRWKLWLYPKGCSQAMSGFLSLYLV
        LL  +TF+DAS GFLVDDCCVFGVDIFVMN                                          +E+  WK+ L+P G  QA  GF S+YL+
Subjt:  LLSPDTFNDASKGFLVDDCCVFGVDIFVMN------------------------------------------LESYRWKLWLYPKGCSQAMSGFLSLYLV

Query:  LDGMKGLPQSSRV
        L  +   P+ ++V
Subjt:  LDGMKGLPQSSRV

A0A5D3BGM0 MATH domain and coiled-coil domain-containing protein7.2e-3846.48Show/hide
Query:  MLKIAVASSKNQRFESHTFKARA---VINVYPNGDETRNGSNYISLYLVMVEDNILSTTSEINVVFTFLVYDYLKDKW---ENGKTRRFGAMKTEWGFEN
        +LK AVASS  QRFES  F A      + +YPNGD+ R+ S++ISLYLV VE+NILSTTSE+NVVFTFLVYD L+ K+   ++ K R+F A K EWG E 
Subjt:  MLKIAVASSKNQRFESHTFKARA---VINVYPNGDETRNGSNYISLYLVMVEDNILSTTSEINVVFTFLVYDYLKDKW---ENGKTRRFGAMKTEWGFEN

Query:  LLSPDTFNDASKGFLVDDCCVFGVDIFVMN------------------------------------------LESYRWKLWLYPKGCSQAMSGFLSLYLV
        LL  +TF+DAS GFLVDDCCVFGVDIFVMN                                          +E+  WK+ L+P G  QA  GF S+YL+
Subjt:  LLSPDTFNDASKGFLVDDCCVFGVDIFVMN------------------------------------------LESYRWKLWLYPKGCSQAMSGFLSLYLV

Query:  LDGMKGLPQSSRV
        L  +   P+ ++V
Subjt:  LDGMKGLPQSSRV

A0A6J1CXZ0 ubiquitin carboxyl-terminal hydrolase 12-like4.0e-4961.63Show/hide
Query:  MLKIAVASSKNQRFESHTFKA---RAVINVYPNGDETRNGS-NYISLYLVMVEDNILSTTSEINVVFTFLVYDYLKDKW---ENGKTRRFGAMKTEWGFE
        +LK A+  S   R+ES  F A   +  + +YP GD  RNGS ++ISLYLV  ED+I   TSE+NVVFTFLVYD LKDK+   ++G  RRF A+KTEWGFE
Subjt:  MLKIAVASSKNQRFESHTFKA---RAVINVYPNGDETRNGS-NYISLYLVMVEDNILSTTSEINVVFTFLVYDYLKDKW---ENGKTRRFGAMKTEWGFE

Query:  NLLSPDTFNDASKGFLVDDCCVFGVDIFVMNLESYRWKLWLYPKGCSQAMSGFLSLYLVLDGMKGLPQSSRV
         L+S DTFND+S GFLVDDCC FGVD+ VM LE YRWKLWLYPKGCS A +GFLSLYL+LD  K + Q S+V
Subjt:  NLLSPDTFNDASKGFLVDDCCVFGVDIFVMNLESYRWKLWLYPKGCSQAMSGFLSLYLVLDGMKGLPQSSRV

A0A6J1CYF6 uncharacterized protein LOC1110156111.9e-5154.11Show/hide
Query:  MLKIAVASSKNQRFESHTFKA---RAVINVYPNGDETRNGSNYISLYLVMVEDNILSTTSEINVVFTFLVYDYLKDKW---ENGKTRRFGAMKTEWGFEN
        +LK A+A+   +R+ES  F     +  + +YPNGD+ RNGS YISLYLV  ED I+S TSE+NVV TFLVYD L+D +    +GK RRF AMKTEWGF  
Subjt:  MLKIAVASSKNQRFESHTFKA---RAVINVYPNGDETRNGSNYISLYLVMVEDNILSTTSEINVVFTFLVYDYLKDKW---ENGKTRRFGAMKTEWGFEN

Query:  LLSPDTFNDASKGFLVDDCCVFGVDIFVMNLESYRWKLWLYPKGCSQAMSGFLSLYLVLDGMKG-LPQSSRV----------------------CWFGFD
        L+S +TFND+S GFLVDDCC FGVDIFVM LESYRWK+ L+PKGCSQ  +GFLSLYL+ D  K  LPQ  RV                      CWF F 
Subjt:  LLSPDTFNDASKGFLVDDCCVFGVDIFVMNLESYRWKLWLYPKGCSQAMSGFLSLYLVLDGMKG-LPQSSRV----------------------CWFGFD

Query:  GVKGAAG
        G++   G
Subjt:  GVKGAAG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G04190.1 TRAF-like family protein1.3e-1234.17Show/hide
Query:  KNQRFESHTFKA----RAVINVYPNGDETRNGSNYISLYLVMVEDNILSTTSEINVVFTFLVYDYLKDKW---ENGKTRRFGAMKTEWGFENLLSPDTFN
        + + +ES  F+A    +  + +Y NG++   GSN+ISLYL   E + L+    IN V    VY+  +DK+    +G  +R+     EWG+  L+   TF 
Subjt:  KNQRFESHTFKA----RAVINVYPNGDETRNGSNYISLYLVMVEDNILSTTSEINVVFTFLVYDYLKDKW---ENGKTRRFGAMKTEWGFENLLSPDTFN

Query:  DASKGFLVDDCCVFGVDIFV
        D S+G+L  D   FG +IF+
Subjt:  DASKGFLVDDCCVFGVDIFV

AT2G15710.1 TRAF-like family protein1.0e-1233.05Show/hide
Query:  RFESHTFKARAV---INVYPNGDETRNGSNYISLYLVMVEDNILSTT-SEINVVFTFLVYDYLKDKW---ENGKTRRFGAMKTEWGFENLLSPDTFNDAS
        ++ESH F +      + +YP G+E   GS +IS+Y+      + ST+  E+     F VY+  ++K+   ++ + +RF A++T WG   +LS +TFND  
Subjt:  RFESHTFKARAV---INVYPNGDETRNGSNYISLYLVMVEDNILSTT-SEINVVFTFLVYDYLKDKW---ENGKTRRFGAMKTEWGFENLLSPDTFNDAS

Query:  KGFLVD-DCCVFGVDIFV
         G+  + + C FGVD+ V
Subjt:  KGFLVD-DCCVFGVDIFV

AT3G17380.1 TRAF-like family protein3.5e-2129.95Show/hide
Query:  MLKIAVASSKNQRFESHTFKARAVINVYPNGDETRNGSNYISLYLVMVEDNILSTTSEINVVFTFLVYDYLKDKW--ENGKTRRFGAMKTEWGFENLLSP
        + K A+   + + FE+  +K + V+  YPNG++++N  +++S+YL + + + LS   E+  VF   + D  KD +    G  RRF ++K EWGF+  +  
Subjt:  MLKIAVASSKNQRFESHTFKARAVINVYPNGDETRNGSNYISLYLVMVEDNILSTTSEINVVFTFLVYDYLKDKW--ENGKTRRFGAMKTEWGFENLLSP

Query:  DTFNDASKGFLVDDCCVFGVDIFV--------------------------------MNLESY----------RWKLWLYPKGCSQAMSGFLSLYLVL
         TF+DAS G+L++D C+FG D+FV                                ++ ESY          +WK+  YP G  Q     LS+YL L
Subjt:  DTFNDASKGFLVDDCCVFGVDIFV--------------------------------MNLESY----------RWKLWLYPKGCSQAMSGFLSLYLVL

AT3G20360.1 TRAF-like family protein7.1e-1434.75Show/hide
Query:  QRFESHTFKA---RAVINVYPNGDETRNGSNYISLYLVMVEDNILSTTSEINVVFTFLVYDYLKDKW---ENGKTRRFGAMKTEWGFENLLSPDTFNDAS
        +R+ES  F+       + VYP G++  NG+ +ISLY+V+    + S + E++V   F V++  + K+   ++    RF A+K  WGF  +L   TFN+  
Subjt:  QRFESHTFKA---RAVINVYPNGDETRNGSNYISLYLVMVEDNILSTTSEINVVFTFLVYDYLKDKW---ENGKTRRFGAMKTEWGFENLLSPDTFNDAS

Query:  KGFLVD-DCCVFGVDIFV
         G+L D D C FGVD+ +
Subjt:  KGFLVD-DCCVFGVDIFV

AT3G22080.1 TRAF-like family protein2.4e-1426.37Show/hide
Query:  KNQRFESHTFKARAVINVYPNGDETRNGSNYISLYLVMVEDNILST-TSEINVVFTFLVYDYLKDKW---ENGKTRRFGAMKTEWGFENLLSPDTFNDAS
        +++ F S  +  R +I  YP G+   +GS +IS+Y+ +   ++L+T T+E+     F V++  ++K+   ++ +++ F A +T WG   +L  DTF D  
Subjt:  KNQRFESHTFKARAVINVYPNGDETRNGSNYISLYLVMVEDNILST-TSEINVVFTFLVYDYLKDKW---ENGKTRRFGAMKTEWGFENLLSPDTFNDAS

Query:  KGFLVD-DCCVFGVDIFV----------------------------------------MNLESYRWKLWLYPKGCSQAMSGFLSLYLVLDGMKGLPQSSR
         G++ + D C FGVD+ V                                         ++   +W L LYPKG  +    +LSLYL LD  + L +S +
Subjt:  KGFLVD-DCCVFGVDIFV----------------------------------------MNLESYRWKLWLYPKGCSQAMSGFLSLYLVLDGMKGLPQSSR

Query:  V
        +
Subjt:  V


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAAGATCGCAGTTGCCAGTTCCAAGAATCAGAGATTTGAATCCCACACCTTCAAAGCCCGCGCGGTTATAAATGTTTACCCCAATGGAGATGAGACGAGAAATGG
ATCAAACTATATTTCCCTCTATTTGGTAATGGTTGAGGACAACATTTTATCAACTACTTCAGAGATCAACGTTGTGTTTACGTTTCTTGTTTATGATTATCTCAAAGACA
AATGGGAAAATGGGAAAACGAGACGATTCGGTGCAATGAAGACGGAGTGGGGATTTGAGAATTTGTTATCACCCGACACTTTCAACGATGCTTCAAAAGGGTTCTTGGTT
GACGATTGTTGTGTATTTGGAGTTGACATTTTTGTCATGAATTTGGAGAGCTATCGTTGGAAGTTATGGTTGTATCCTAAAGGATGCTCCCAAGCAATGTCTGGCTTTTT
GTCCTTGTACTTGGTGTTAGATGGTATGAAAGGGCTTCCTCAAAGTTCTCGAGTGTGTTGGTTTGGGTTTGATGGTGTAAAAGGCGCGGCGGGCGGGTTGTCCCAGTATC
ATTTCATTGAGGGATCTCCAAGAACCAACAAAAGGCTTTACTCTCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAAGATCGCAGTTGCCAGTTCCAAGAATCAGAGATTTGAATCCCACACCTTCAAAGCCCGCGCGGTTATAAATGTTTACCCCAATGGAGATGAGACGAGAAATGG
ATCAAACTATATTTCCCTCTATTTGGTAATGGTTGAGGACAACATTTTATCAACTACTTCAGAGATCAACGTTGTGTTTACGTTTCTTGTTTATGATTATCTCAAAGACA
AATGGGAAAATGGGAAAACGAGACGATTCGGTGCAATGAAGACGGAGTGGGGATTTGAGAATTTGTTATCACCCGACACTTTCAACGATGCTTCAAAAGGGTTCTTGGTT
GACGATTGTTGTGTATTTGGAGTTGACATTTTTGTCATGAATTTGGAGAGCTATCGTTGGAAGTTATGGTTGTATCCTAAAGGATGCTCCCAAGCAATGTCTGGCTTTTT
GTCCTTGTACTTGGTGTTAGATGGTATGAAAGGGCTTCCTCAAAGTTCTCGAGTGTGTTGGTTTGGGTTTGATGGTGTAAAAGGCGCGGCGGGCGGGTTGTCCCAGTATC
ATTTCATTGAGGGATCTCCAAGAACCAACAAAAGGCTTTACTCTCGATGA
Protein sequenceShow/hide protein sequence
MLKIAVASSKNQRFESHTFKARAVINVYPNGDETRNGSNYISLYLVMVEDNILSTTSEINVVFTFLVYDYLKDKWENGKTRRFGAMKTEWGFENLLSPDTFNDASKGFLV
DDCCVFGVDIFVMNLESYRWKLWLYPKGCSQAMSGFLSLYLVLDGMKGLPQSSRVCWFGFDGVKGAAGGLSQYHFIEGSPRTNKRLYSR