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Lag0029510 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029510
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUBA domain-containing protein
Genome locationchr8:39627703..39630599
RNA-Seq ExpressionLag0029510
SyntenyLag0029510
Gene Ontology termsGO:0016192 - vesicle-mediated transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
InterPro domainsIPR010908 - Longin domain
IPR011012 - Longin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033311.1 chromatin assembly factor 1 subunit A [Cucumis melo var. makuwa]1.2e-3993.4Show/hide
Query:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAERRWRLGLPPEDPSTAKPAAPVVEEKKISLPVRPASMAEQMRECLQSLK
        ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAERR RLGLPPEDPSTAKP APVVEEKK+SLPVRPAS AEQMRECL+SLK
Subjt:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAERRWRLGLPPEDPSTAKPAAPVVEEKKISLPVRPASMAEQMRECLQSLK

Query:  SNHKSM
        SNHK +
Subjt:  SNHKSM

TYK21595.1 chromatin assembly factor 1 subunit A [Cucumis melo var. makuwa]1.2e-3993.4Show/hide
Query:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAERRWRLGLPPEDPSTAKPAAPVVEEKKISLPVRPASMAEQMRECLQSLK
        ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAERR RLGLPPEDPSTAKP APVVEEKK+SLPVRPAS AEQMRECL+SLK
Subjt:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAERRWRLGLPPEDPSTAKPAAPVVEEKKISLPVRPASMAEQMRECLQSLK

Query:  SNHKSM
        SNHK +
Subjt:  SNHKSM

XP_004138965.1 chromatin assembly factor 1 subunit A-B [Cucumis sativus]1.2e-3995.19Show/hide
Query:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAERRWRLGLPPEDPSTAKPAAPVVEEKKISLPVRPASMAEQMRECLQSLK
        ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAERR RLGLPPEDPSTAKP APVVEEKK+SLPVRPAS AEQMRECL+SLK
Subjt:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAERRWRLGLPPEDPSTAKPAAPVVEEKKISLPVRPASMAEQMRECLQSLK

Query:  SNHK
        SNHK
Subjt:  SNHK

XP_008457228.1 PREDICTED: chromatin assembly factor 1 subunit A [Cucumis melo]1.6e-3995.19Show/hide
Query:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAERRWRLGLPPEDPSTAKPAAPVVEEKKISLPVRPASMAEQMRECLQSLK
        ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAERR RLGLPPEDPSTAKP APVVEEKK+SLPVRPAS AEQMRECL+SLK
Subjt:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAERRWRLGLPPEDPSTAKPAAPVVEEKKISLPVRPASMAEQMRECLQSLK

Query:  SNHK
        SNHK
Subjt:  SNHK

XP_038874495.1 chromatin assembly factor 1 subunit A-B [Benincasa hispida]6.2e-3993.27Show/hide
Query:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAERRWRLGLPPEDPSTAKPAAPVVEEKKISLPVRPASMAEQMRECLQSLK
        ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAR+KIRQKLE+DKAERR RLGLPPEDPSTAKP APVVEEKK+SLPVRPAS AEQMRECL+SLK
Subjt:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAERRWRLGLPPEDPSTAKPAAPVVEEKKISLPVRPASMAEQMRECLQSLK

Query:  SNHK
        SNHK
Subjt:  SNHK

TrEMBL top hitse value%identityAlignment
A0A0A0LL71 UBA domain-containing protein6.0e-4095.19Show/hide
Query:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAERRWRLGLPPEDPSTAKPAAPVVEEKKISLPVRPASMAEQMRECLQSLK
        ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAERR RLGLPPEDPSTAKP APVVEEKK+SLPVRPAS AEQMRECL+SLK
Subjt:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAERRWRLGLPPEDPSTAKPAAPVVEEKKISLPVRPASMAEQMRECLQSLK

Query:  SNHK
        SNHK
Subjt:  SNHK

A0A1S3C4L3 chromatin assembly factor 1 subunit A7.9e-4095.19Show/hide
Query:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAERRWRLGLPPEDPSTAKPAAPVVEEKKISLPVRPASMAEQMRECLQSLK
        ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAERR RLGLPPEDPSTAKP APVVEEKK+SLPVRPAS AEQMRECL+SLK
Subjt:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAERRWRLGLPPEDPSTAKPAAPVVEEKKISLPVRPASMAEQMRECLQSLK

Query:  SNHK
        SNHK
Subjt:  SNHK

A0A5A7SV28 Chromatin assembly factor 1 subunit A6.0e-4093.4Show/hide
Query:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAERRWRLGLPPEDPSTAKPAAPVVEEKKISLPVRPASMAEQMRECLQSLK
        ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAERR RLGLPPEDPSTAKP APVVEEKK+SLPVRPAS AEQMRECL+SLK
Subjt:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAERRWRLGLPPEDPSTAKPAAPVVEEKKISLPVRPASMAEQMRECLQSLK

Query:  SNHKSM
        SNHK +
Subjt:  SNHKSM

A0A5D3DDJ0 Chromatin assembly factor 1 subunit A6.0e-4093.4Show/hide
Query:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAERRWRLGLPPEDPSTAKPAAPVVEEKKISLPVRPASMAEQMRECLQSLK
        ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAERR RLGLPPEDPSTAKP APVVEEKK+SLPVRPAS AEQMRECL+SLK
Subjt:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAERRWRLGLPPEDPSTAKPAAPVVEEKKISLPVRPASMAEQMRECLQSLK

Query:  SNHKSM
        SNHK +
Subjt:  SNHKSM

A0A6J1CBW3 UBX domain-containing protein 13.9e-3993.27Show/hide
Query:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAERRWRLGLPPEDPSTAKPAAPVVEEKKISLPVRPASMAEQMRECLQSLK
        ERIRIGKELLEAKRIEEENERKRI+ALRKAEKEEEKRAR+KIRQKLEEDKAERR RLGLPPEDPSTAKP+APVVEEKKISLPVRPAS AEQMRECL+ LK
Subjt:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAERRWRLGLPPEDPSTAKPAAPVVEEKKISLPVRPASMAEQMRECLQSLK

Query:  SNHK
        SNHK
Subjt:  SNHK

SwissProt top hitse value%identityAlignment
O48850 Vesicle-associated membrane protein 7253.3e-1942.48Show/hide
Query:  MAQKSLIYAFVALGTVILAEYTEYSGNFNSIAFQCLQKLPTANNKFTYNCDGHTFNYLIDNGYIHKFLAEFHERIRIGKELLEAKRIEEENERKRILALR
        M Q++LIY+FVA GTVIL EYTE+ GNF ++A QCLQKLP++NNKFTYNCDGHTFNYL++NG+ +  +A      +I    LE  R++E+  ++      
Subjt:  MAQKSLIYAFVALGTVILAEYTEYSGNFNSIAFQCLQKLPTANNKFTYNCDGHTFNYLIDNGYIHKFLAEFHERIRIGKELLEAKRIEEENERKRILALR

Query:  KAEKEEEKRAREKIRQKLEEDKAERRWRLGLPPEDPSTAKPAAPVVEEKKISL
        KA   +      +   KL+E     ++ +  P E    AK  A V E K + +
Subjt:  KAEKEEEKRAREKIRQKLEEDKAERRWRLGLPPEDPSTAKPAAPVVEEKKISL

P47192 Vesicle-associated membrane protein 7228.7e-2043.79Show/hide
Query:  MAQKSLIYAFVALGTVILAEYTEYSGNFNSIAFQCLQKLPTANNKFTYNCDGHTFNYLIDNGYIHKFLAEFHERIRIGKELLEAKRIEEENERKRILALR
        MAQ+SLIY+FVA GTVIL E+T++ GNF SIA QCLQKLP++NNKFTYNCDGHTFNYL++NG+ +  +A      +I    LE  R++E+  ++      
Subjt:  MAQKSLIYAFVALGTVILAEYTEYSGNFNSIAFQCLQKLPTANNKFTYNCDGHTFNYLIDNGYIHKFLAEFHERIRIGKELLEAKRIEEENERKRILALR

Query:  KAEKEEEKRAREKIRQKLEEDKAERRWRLGLPPEDPSTAKPAAPVVEEKKISL
        KA   +     ++   KL+E     ++ +  P E    AK  A V E K + +
Subjt:  KAEKEEEKRAREKIRQKLEEDKAERRWRLGLPPEDPSTAKPAAPVVEEKKISL

Q9M376 Vesicle-associated membrane protein 7272.3e-2049.04Show/hide
Query:  MAQKSLIYAFVALGTVILAEYTEYSGNFNSIAFQCLQKLPTANNKFTYNCDGHTFNYLIDNGYIHKFLAEFHERIRIGKELLEAKRIEEENERKRILALR
        M+QK LIY+FVA GTV+LAE+T YSGNF++IA QCLQKLPT ++K+TY+CDGHTFN+L+DNG++  FL    E        +  +R++E+ +++   +++
Subjt:  MAQKSLIYAFVALGTVILAEYTEYSGNFNSIAFQCLQKLPTANNKFTYNCDGHTFNYLIDNGYIHKFLAEFHERIRIGKELLEAKRIEEENERKRILALR

Query:  KAEK
          E+
Subjt:  KAEK

Q9MAS5 Putative vesicle-associated membrane protein 7261.9e-1943.79Show/hide
Query:  MAQKSLIYAFVALGTVILAEYTEYSGNFNSIAFQCLQKLPTANNKFTYNCDGHTFNYLIDNGYIHKFLAEFHERIRIGKELLEAKRIEEENERKRILALR
        M Q+SLIY+FVA GTVILAEYTE+ GNF S+A QCLQKLP++NNKFTYNCDGHTFNYL DNG+ +  +       +I    LE  R++E+  ++      
Subjt:  MAQKSLIYAFVALGTVILAEYTEYSGNFNSIAFQCLQKLPTANNKFTYNCDGHTFNYLIDNGYIHKFLAEFHERIRIGKELLEAKRIEEENERKRILALR

Query:  KAEKEEEKRAREKIRQKLEEDKAERRWRLGLPPEDPSTAKPAAPVVEEKKISL
        KA   +     ++   KL+E     ++    P E    +K  A V E K + +
Subjt:  KAEKEEEKRAREKIRQKLEEDKAERRWRLGLPPEDPSTAKPAAPVVEEKKISL

Q9ZTW3 Vesicle-associated membrane protein 7212.5e-1943.14Show/hide
Query:  MAQKSLIYAFVALGTVILAEYTEYSGNFNSIAFQCLQKLPTANNKFTYNCDGHTFNYLIDNGYIHKFLAEFHERIRIGKELLEAKRIEEENERKRILALR
        MAQ+SLIY+FVA GTVIL E+T++ GNF SIA QCLQKLP++NNKFTYNCDGHTFNYL+++G+ +  +A      +I    LE  R++E+  ++      
Subjt:  MAQKSLIYAFVALGTVILAEYTEYSGNFNSIAFQCLQKLPTANNKFTYNCDGHTFNYLIDNGYIHKFLAEFHERIRIGKELLEAKRIEEENERKRILALR

Query:  KAEKEEEKRAREKIRQKLEEDKAERRWRLGLPPEDPSTAKPAAPVVEEKKISL
        KA   +     ++   KL+E     ++ +  P E    AK  A V E K + +
Subjt:  KAEKEEEKRAREKIRQKLEEDKAERRWRLGLPPEDPSTAKPAAPVVEEKKISL

Arabidopsis top hitse value%identityAlignment
AT1G04850.1 ubiquitin-associated (UBA)/TS-N domain-containing protein2.3e-3680.19Show/hide
Query:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAERRWRLGLPPEDPST--AKPAAPVVEEKKISLPVRPASMAEQMRECLQS
        ERIRIGKELLEAKR+EE NERKR++ LRKAEKEEEKRAREKIRQKLEEDKAERR +LGLPPEDP+T  AKP+ PVVEEKK++LP+RPA+  EQMRECL+S
Subjt:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAERRWRLGLPPEDPST--AKPAAPVVEEKKISLPVRPASMAEQMRECLQS

Query:  LKSNHK
        LK  HK
Subjt:  LKSNHK

AT2G33120.1 synaptobrevin-related protein 16.2e-2143.79Show/hide
Query:  MAQKSLIYAFVALGTVILAEYTEYSGNFNSIAFQCLQKLPTANNKFTYNCDGHTFNYLIDNGYIHKFLAEFHERIRIGKELLEAKRIEEENERKRILALR
        MAQ+SLIY+FVA GTVIL E+T++ GNF SIA QCLQKLP++NNKFTYNCDGHTFNYL++NG+ +  +A      +I    LE  R++E+  ++      
Subjt:  MAQKSLIYAFVALGTVILAEYTEYSGNFNSIAFQCLQKLPTANNKFTYNCDGHTFNYLIDNGYIHKFLAEFHERIRIGKELLEAKRIEEENERKRILALR

Query:  KAEKEEEKRAREKIRQKLEEDKAERRWRLGLPPEDPSTAKPAAPVVEEKKISL
        KA   +     ++   KL+E     ++ +  P E    AK  A V E K + +
Subjt:  KAEKEEEKRAREKIRQKLEEDKAERRWRLGLPPEDPSTAKPAAPVVEEKKISL

AT3G54300.1 vesicle-associated membrane protein 7271.6e-2149.04Show/hide
Query:  MAQKSLIYAFVALGTVILAEYTEYSGNFNSIAFQCLQKLPTANNKFTYNCDGHTFNYLIDNGYIHKFLAEFHERIRIGKELLEAKRIEEENERKRILALR
        M+QK LIY+FVA GTV+LAE+T YSGNF++IA QCLQKLPT ++K+TY+CDGHTFN+L+DNG++  FL    E        +  +R++E+ +++   +++
Subjt:  MAQKSLIYAFVALGTVILAEYTEYSGNFNSIAFQCLQKLPTANNKFTYNCDGHTFNYLIDNGYIHKFLAEFHERIRIGKELLEAKRIEEENERKRILALR

Query:  KAEK
          E+
Subjt:  KAEK

AT3G54300.2 vesicle-associated membrane protein 7271.6e-2149.04Show/hide
Query:  MAQKSLIYAFVALGTVILAEYTEYSGNFNSIAFQCLQKLPTANNKFTYNCDGHTFNYLIDNGYIHKFLAEFHERIRIGKELLEAKRIEEENERKRILALR
        M+QK LIY+FVA GTV+LAE+T YSGNF++IA QCLQKLPT ++K+TY+CDGHTFN+L+DNG++  FL    E        +  +R++E+ +++   +++
Subjt:  MAQKSLIYAFVALGTVILAEYTEYSGNFNSIAFQCLQKLPTANNKFTYNCDGHTFNYLIDNGYIHKFLAEFHERIRIGKELLEAKRIEEENERKRILALR

Query:  KAEK
          E+
Subjt:  KAEK

AT5G48690.1 CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), PUB domain (InterPro:IPR018997), PUG domain (InterPro:IPR006567), UBA-like (InterPro:IPR009060)8.1e-2158.49Show/hide
Query:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAERRWRLGLP--PEDPSTAKPAAPVVEEKKISLPVRPASMAEQMRECLQS
        ERIR GKEL+E KRI EENERKR +ALRKAEK+EEK+AREKI  K+  DK ER+ RLGLP   E  ST+ P +P+  ++ +       S AE+MRECL+S
Subjt:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAERRWRLGLP--PEDPSTAKPAAPVVEEKKISLPVRPASMAEQMRECLQS

Query:  LKSNHK
        L+ NHK
Subjt:  LKSNHK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCAGAAGTCTCTAATCTATGCTTTTGTCGCTCTCGGAACTGTGATTCTCGCCGAGTACACCGAGTACAGTGGGAATTTCAATTCCATTGCTTTTCAGTGCCTCCA
GAAATTGCCCACTGCCAATAACAAATTCACCTACAATTGCGATGGCCACACCTTCAATTATCTCATCGACAACGGTTACATTCATAAATTCCTAGCTGAATTTCATGAGA
GAATCCGAATTGGCAAGGAGCTCCTAGAAGCAAAAAGGATCGAGGAAGAAAATGAGAGAAAAAGAATATTAGCCTTGAGGAAAGCTGAAAAAGAAGAAGAGAAAAGAGCC
AGAGAAAAAATTCGTCAAAAACTTGAAGAGGACAAGGCAGAAAGAAGATGGAGGCTTGGATTGCCACCAGAAGATCCTTCGACTGCAAAACCTGCAGCACCTGTTGTTGA
AGAGAAAAAGATCTCATTGCCCGTTAGACCTGCTTCAATGGCAGAGCAAATGAGAGAATGCTTGCAATCTTTAAAGTCCAATCACAAGAGCATGGCTTTGTTTGCATTTG
TCCACAAAATGGTTGTCCTTGCCACTCATGGTGTCCTAACACATGGCCACGTGGCAGCTGCCATATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCAGAAGTCTCTAATCTATGCTTTTGTCGCTCTCGGAACTGTGATTCTCGCCGAGTACACCGAGTACAGTGGGAATTTCAATTCCATTGCTTTTCAGTGCCTCCA
GAAATTGCCCACTGCCAATAACAAATTCACCTACAATTGCGATGGCCACACCTTCAATTATCTCATCGACAACGGTTACATTCATAAATTCCTAGCTGAATTTCATGAGA
GAATCCGAATTGGCAAGGAGCTCCTAGAAGCAAAAAGGATCGAGGAAGAAAATGAGAGAAAAAGAATATTAGCCTTGAGGAAAGCTGAAAAAGAAGAAGAGAAAAGAGCC
AGAGAAAAAATTCGTCAAAAACTTGAAGAGGACAAGGCAGAAAGAAGATGGAGGCTTGGATTGCCACCAGAAGATCCTTCGACTGCAAAACCTGCAGCACCTGTTGTTGA
AGAGAAAAAGATCTCATTGCCCGTTAGACCTGCTTCAATGGCAGAGCAAATGAGAGAATGCTTGCAATCTTTAAAGTCCAATCACAAGAGCATGGCTTTGTTTGCATTTG
TCCACAAAATGGTTGTCCTTGCCACTCATGGTGTCCTAACACATGGCCACGTGGCAGCTGCCATATGA
Protein sequenceShow/hide protein sequence
MAQKSLIYAFVALGTVILAEYTEYSGNFNSIAFQCLQKLPTANNKFTYNCDGHTFNYLIDNGYIHKFLAEFHERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRA
REKIRQKLEEDKAERRWRLGLPPEDPSTAKPAAPVVEEKKISLPVRPASMAEQMRECLQSLKSNHKSMALFAFVHKMVVLATHGVLTHGHVAAAI