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Lag0029512 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029512
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTRAF-like family protein
Genome locationchr8:39643266..39644944
RNA-Seq ExpressionLag0029512
SyntenyLag0029512
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002083 - MATH/TRAF domain
IPR008974 - TRAF-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146380.1 probable inactive serine/threonine-protein kinase fnkC [Momordica charantia]7.6e-1952.83Show/hide
Query:  ACVVRSTRDEEPLHYTLQIQSFSFLKAALASIRRKLELIKFGGSSKIAVASSKNHRFESHTFKARGYKWKLAIYPNGDETRNGSNYISLYLMGKRDETIQ
        A V+RSTRDE+PLHYTLQIQSFS LKAAL                    ASS   R+ES  F A GYKWKLA+YPNGD  RNG+++ISLYL+   D+   
Subjt:  ACVVRSTRDEEPLHYTLQIQSFSFLKAALASIRRKLELIKFGGSSKIAVASSKNHRFESHTFKARGYKWKLAIYPNGDETRNGSNYISLYLMGKRDETIQ

Query:  CNEDGV
        C+   V
Subjt:  CNEDGV

XP_022146382.1 uncharacterized protein LOC111015610 [Momordica charantia]1.1e-1748.25Show/hide
Query:  KRMTNDNSPSPTQNPDSACVVRSTRDEEPLHYTLQIQSFSFLKAALASIRRKLELIKFGGSSKIAVASSKNHRFESHTFKARGYKWKLAIYPNGDETRNG
        KRM  ++  SP+   DS  V+RS RDE+PLHYTLQIQ FS LK AL                    A+S   R+ES  F   G+KWKLA+YP+GD  RNG
Subjt:  KRMTNDNSPSPTQNPDSACVVRSTRDEEPLHYTLQIQSFSFLKAALASIRRKLELIKFGGSSKIAVASSKNHRFESHTFKARGYKWKLAIYPNGDETRNG

Query:  SNYISLYLMGKRDE
        SN+ISLYL+   D+
Subjt:  SNYISLYLMGKRDE

XP_022146383.1 uncharacterized protein LOC111015611 [Momordica charantia]1.5e-1949.18Show/hide
Query:  RMTNDNSP--SPTQNPDSACVVRSTRDEEPLHYTLQIQSFSFLKAALASIRRKLELIKFGGSSKIAVASSKNHRFESHTFKARGYKWKLAIYPNGDETRN
        +M N N+   SPT + +S  V+RS RDE+PLHYTL+I+SFS LK AL                    ASSK  RF S  F A GYKWKLA+YPNGD+ RN
Subjt:  RMTNDNSP--SPTQNPDSACVVRSTRDEEPLHYTLQIQSFSFLKAALASIRRKLELIKFGGSSKIAVASSKNHRFESHTFKARGYKWKLAIYPNGDETRN

Query:  GSNYISLYLMGKRDETIQCNED
        GS YISLYL+   DE +    +
Subjt:  GSNYISLYLMGKRDETIQCNED

XP_038874970.1 uncharacterized protein LOC120067490 [Benincasa hispida]2.9e-1848.72Show/hide
Query:  MEKKRMTNDNSPSPTQNPDSACVVRSTRDEEPLHYTLQIQSFSFLKAALASIRRKLELIKFGGSSKIAVASSKNHRFESHTFKARGYKWKLAIYPNGDET
        + K +    N  S   N +S+ V+R++RDE+PLHYTL+IQSFS LKAA+A                   ASS  +R+ES  FKA GYKWKLA+YPNGD  
Subjt:  MEKKRMTNDNSPSPTQNPDSACVVRSTRDEEPLHYTLQIQSFSFLKAALASIRRKLELIKFGGSSKIAVASSKNHRFESHTFKARGYKWKLAIYPNGDET

Query:  RNGSNYISLYLMGKRDE
        RN +N+ISLYL+   DE
Subjt:  RNGSNYISLYLMGKRDE

XP_038875772.1 uncharacterized protein LOC120068142 [Benincasa hispida]7.8e-1650Show/hide
Query:  KRMTNDNSPSPTQNPD-SACVVRSTRDEEPLHYTLQIQSFSFLKAALASIRRKLELIKFGGSSKIAVASSKNHRFESHTFKARGYKWKLAIYPNGDETRN
        +R  N+N+ SP  + D S+ VV STR E+P+HYTL+IQSFS LK  L                    ASS+  RFES  F A  Y+WKLA+YPNGDE RN
Subjt:  KRMTNDNSPSPTQNPD-SACVVRSTRDEEPLHYTLQIQSFSFLKAALASIRRKLELIKFGGSSKIAVASSKNHRFESHTFKARGYKWKLAIYPNGDETRN

Query:  GSNYISLYLM
         SN+ISLYL+
Subjt:  GSNYISLYLM

TrEMBL top hitse value%identityAlignment
A0A5D3BGH9 MATH domain and coiled-coil domain-containing protein3.2e-1549.04Show/hide
Query:  VVRSTRDEEPLHYTLQIQSFSFLKAALASIRRKLELIKFGGSSKIAVASSKNHRFESHTFKARGYKWKLAIYPNGDETRNGSNYISLYLMGKRDETIQCN
        ++RS+R   PLHYTLQIQSFS LKAAL                    A+S   R+ES  F    Y WKLA+YPNGDE RNGSN+ISLYL+   DE    +
Subjt:  VVRSTRDEEPLHYTLQIQSFSFLKAALASIRRKLELIKFGGSSKIAVASSKNHRFESHTFKARGYKWKLAIYPNGDETRNGSNYISLYLMGKRDETIQCN

Query:  EDGV
        E  V
Subjt:  EDGV

A0A6J1CX47 probable inactive serine/threonine-protein kinase fnkC3.7e-1952.83Show/hide
Query:  ACVVRSTRDEEPLHYTLQIQSFSFLKAALASIRRKLELIKFGGSSKIAVASSKNHRFESHTFKARGYKWKLAIYPNGDETRNGSNYISLYLMGKRDETIQ
        A V+RSTRDE+PLHYTLQIQSFS LKAAL                    ASS   R+ES  F A GYKWKLA+YPNGD  RNG+++ISLYL+   D+   
Subjt:  ACVVRSTRDEEPLHYTLQIQSFSFLKAALASIRRKLELIKFGGSSKIAVASSKNHRFESHTFKARGYKWKLAIYPNGDETRNGSNYISLYLMGKRDETIQ

Query:  CNEDGV
        C+   V
Subjt:  CNEDGV

A0A6J1CYF6 uncharacterized protein LOC1110156117.4e-2049.18Show/hide
Query:  RMTNDNSP--SPTQNPDSACVVRSTRDEEPLHYTLQIQSFSFLKAALASIRRKLELIKFGGSSKIAVASSKNHRFESHTFKARGYKWKLAIYPNGDETRN
        +M N N+   SPT + +S  V+RS RDE+PLHYTL+I+SFS LK AL                    ASSK  RF S  F A GYKWKLA+YPNGD+ RN
Subjt:  RMTNDNSP--SPTQNPDSACVVRSTRDEEPLHYTLQIQSFSFLKAALASIRRKLELIKFGGSSKIAVASSKNHRFESHTFKARGYKWKLAIYPNGDETRN

Query:  GSNYISLYLMGKRDETIQCNED
        GS YISLYL+   DE +    +
Subjt:  GSNYISLYLMGKRDETIQCNED

A0A6J1CZ69 ubiquitin carboxyl-terminal hydrolase 13-like1.4e-1548.65Show/hide
Query:  MTNDNSPSPTQNPDSACVVRSTRDEEPLHYTLQIQSFSFLKAALASIRRKLELIKFGGSSKIAVASSKNHRFESHTFKARGYKWKLAIYPNGDETRNGSN
        M  +N+ SP+     + V+  TRDE+PLHYTLQIQSFS LK AL                    A+S   R+ES  F A GYKWKLA+YPNGD  RNGS+
Subjt:  MTNDNSPSPTQNPDSACVVRSTRDEEPLHYTLQIQSFSFLKAALASIRRKLELIKFGGSSKIAVASSKNHRFESHTFKARGYKWKLAIYPNGDETRNGSN

Query:  YISLYLMGKRD
        +ISLYL+   D
Subjt:  YISLYLMGKRD

A0A6J1CZF7 uncharacterized protein LOC1110156105.3e-1848.25Show/hide
Query:  KRMTNDNSPSPTQNPDSACVVRSTRDEEPLHYTLQIQSFSFLKAALASIRRKLELIKFGGSSKIAVASSKNHRFESHTFKARGYKWKLAIYPNGDETRNG
        KRM  ++  SP+   DS  V+RS RDE+PLHYTLQIQ FS LK AL                    A+S   R+ES  F   G+KWKLA+YP+GD  RNG
Subjt:  KRMTNDNSPSPTQNPDSACVVRSTRDEEPLHYTLQIQSFSFLKAALASIRRKLELIKFGGSSKIAVASSKNHRFESHTFKARGYKWKLAIYPNGDETRNG

Query:  SNYISLYLMGKRDE
        SN+ISLYL+   D+
Subjt:  SNYISLYLMGKRDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G04170.1 TRAF-like family protein5.4e-0731.52Show/hide
Query:  RDEEPLHYTLQIQSFSFLKAALASIRRKLELIKFGGSSKIAVASSKNHRFESHTFKARGYKWKLAIYPNGDETRNGSNYISLYLMGKRDETI
        RDE P +  L I SFS +K                          +   +ES  F+A GYKW+L +Y NG++   G+N+ISLY+  +  E++
Subjt:  RDEEPLHYTLQIQSFSFLKAALASIRRKLELIKFGGSSKIAVASSKNHRFESHTFKARGYKWKLAIYPNGDETRNGSNYISLYLMGKRDETI

AT2G04170.2 TRAF-like family protein5.4e-0731.52Show/hide
Query:  RDEEPLHYTLQIQSFSFLKAALASIRRKLELIKFGGSSKIAVASSKNHRFESHTFKARGYKWKLAIYPNGDETRNGSNYISLYLMGKRDETI
        RDE P +  L I SFS +K                          +   +ES  F+A GYKW+L +Y NG++   G+N+ISLY+  +  E++
Subjt:  RDEEPLHYTLQIQSFSFLKAALASIRRKLELIKFGGSSKIAVASSKNHRFESHTFKARGYKWKLAIYPNGDETRNGSNYISLYLMGKRDETI

AT2G04170.3 TRAF-like family protein5.4e-0731.52Show/hide
Query:  RDEEPLHYTLQIQSFSFLKAALASIRRKLELIKFGGSSKIAVASSKNHRFESHTFKARGYKWKLAIYPNGDETRNGSNYISLYLMGKRDETI
        RDE P +  L I SFS +K                          +   +ES  F+A GYKW+L +Y NG++   G+N+ISLY+  +  E++
Subjt:  RDEEPLHYTLQIQSFSFLKAALASIRRKLELIKFGGSSKIAVASSKNHRFESHTFKARGYKWKLAIYPNGDETRNGSNYISLYLMGKRDETI

AT2G04170.4 TRAF-like family protein5.4e-0731.52Show/hide
Query:  RDEEPLHYTLQIQSFSFLKAALASIRRKLELIKFGGSSKIAVASSKNHRFESHTFKARGYKWKLAIYPNGDETRNGSNYISLYLMGKRDETI
        RDE P +  L I SFS +K                          +   +ES  F+A GYKW+L +Y NG++   G+N+ISLY+  +  E++
Subjt:  RDEEPLHYTLQIQSFSFLKAALASIRRKLELIKFGGSSKIAVASSKNHRFESHTFKARGYKWKLAIYPNGDETRNGSNYISLYLMGKRDETI

AT3G17380.1 TRAF-like family protein8.9e-1033.71Show/hide
Query:  VVRSTRDEEPLHYTLQIQSFSFLKAALASIRRKLELIKFGGSSKIAVASSKNHRFESHTFKARGYKWKLAIYPNGDETRNGSNYISLYL
        +++S  D  P HY ++I+SFS L                   +K A+      R+E+ +F+A GYKWKL +YPNG++++N  +++S+YL
Subjt:  VVRSTRDEEPLHYTLQIQSFSFLKAALASIRRKLELIKFGGSSKIAVASSKNHRFESHTFKARGYKWKLAIYPNGDETRNGSNYISLYL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAGAAAAGGATGACGAATGACAACTCTCCTTCTCCCACACAAAACCCAGATTCTGCTTGTGTTGTAAGGTCCACCAGAGATGAAGAACCCCTCCATTATACTTT
ACAAATCCAATCCTTTTCCTTTCTGAAGGCTGCACTTGCTAGTATAAGAAGAAAGCTTGAATTGATTAAATTTGGTGGGTCGTCTAAGATCGCAGTTGCCAGTTCCAAGA
ATCACAGATTTGAATCCCACACCTTCAAAGCCCGCGGTTATAAATGGAAACTAGCAATTTACCCCAATGGAGATGAGACGAGAAATGGATCAAACTATATTTCCCTCTAT
TTGATGGGAAAACGAGACGAGACGATTCAGTGCAATGAAGACGGAGTGGGGATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAGAAAAGGATGACGAATGACAACTCTCCTTCTCCCACACAAAACCCAGATTCTGCTTGTGTTGTAAGGTCCACCAGAGATGAAGAACCCCTCCATTATACTTT
ACAAATCCAATCCTTTTCCTTTCTGAAGGCTGCACTTGCTAGTATAAGAAGAAAGCTTGAATTGATTAAATTTGGTGGGTCGTCTAAGATCGCAGTTGCCAGTTCCAAGA
ATCACAGATTTGAATCCCACACCTTCAAAGCCCGCGGTTATAAATGGAAACTAGCAATTTACCCCAATGGAGATGAGACGAGAAATGGATCAAACTATATTTCCCTCTAT
TTGATGGGAAAACGAGACGAGACGATTCAGTGCAATGAAGACGGAGTGGGGATTTGA
Protein sequenceShow/hide protein sequence
MEKKRMTNDNSPSPTQNPDSACVVRSTRDEEPLHYTLQIQSFSFLKAALASIRRKLELIKFGGSSKIAVASSKNHRFESHTFKARGYKWKLAIYPNGDETRNGSNYISLY
LMGKRDETIQCNEDGVGI