; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0029547 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029547
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionribonuclease P protein subunit p38
Genome locationchr8:39951920..39954259
RNA-Seq ExpressionLag0029547
SyntenyLag0029547
Gene Ontology termsGO:0043232 - intracellular non-membrane-bounded organelle (cellular component)
InterPro domainsIPR004038 - Ribosomal protein L7Ae/L30e/S12e/Gadd45
IPR029064 - 50S ribosomal protein L30e-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579150.1 hypothetical protein SDJN03_23598, partial [Cucurbita argyrosperma subsp. sororia]1.0e-7189.29Show/hide
Query:  MGKKAKSS---ASVQSKPDPYSYEGERLDELLQSIQREIKRARVLNAESLPEKIWLKKQFAVGVNEVTRVLERMKPSGDSASITNPNYKACTVKLQAILL
        MGKKAKSS   A VQSK +  SYEGERLDELLQSIQREIKRAR LNAESLPEKIWLKKQFA+GVNEVTRVLERM PS DSA I NPNYKACTV+LQAILL
Subjt:  MGKKAKSS---ASVQSKPDPYSYEGERLDELLQSIQREIKRARVLNAESLPEKIWLKKQFAVGVNEVTRVLERMKPSGDSASITNPNYKACTVKLQAILL

Query:  TADCNPLWLTNHVPSLAISRKVPLILVKGKEGSLRLGQLVNLKTAIAIGIKANGSPVNQLIGEILQRT
        TADCNP WLTNHVPSLAISRKVPLILVK KEGSLRLG+LVNLKTAIAIGIKANGSPVNQLIGEILQRT
Subjt:  TADCNPLWLTNHVPSLAISRKVPLILVKGKEGSLRLGQLVNLKTAIAIGIKANGSPVNQLIGEILQRT

XP_022938626.1 ribonuclease P protein subunit p38 [Cucurbita moschata]1.2e-7289.88Show/hide
Query:  MGKKAKSS---ASVQSKPDPYSYEGERLDELLQSIQREIKRARVLNAESLPEKIWLKKQFAVGVNEVTRVLERMKPSGDSASITNPNYKACTVKLQAILL
        MGKKAKSS   A VQSK +  SYEGERLDELLQSIQREIKRAR LNAESLPEKIWLKKQFA+GVNEVTRVLERM PSGDSA I NPNYKACTV+LQAILL
Subjt:  MGKKAKSS---ASVQSKPDPYSYEGERLDELLQSIQREIKRARVLNAESLPEKIWLKKQFAVGVNEVTRVLERMKPSGDSASITNPNYKACTVKLQAILL

Query:  TADCNPLWLTNHVPSLAISRKVPLILVKGKEGSLRLGQLVNLKTAIAIGIKANGSPVNQLIGEILQRT
        TADCNP WLTNHVPSLAISRKVPLILVK KEGSLRLG+LVNLKTAIAIGIKANGSPVNQLIGEILQRT
Subjt:  TADCNPLWLTNHVPSLAISRKVPLILVKGKEGSLRLGQLVNLKTAIAIGIKANGSPVNQLIGEILQRT

XP_022993803.1 ribonuclease P protein subunit p38 [Cucurbita maxima]2.3e-6886.9Show/hide
Query:  MGKKAKSS---ASVQSKPDPYSYEGERLDELLQSIQREIKRARVLNAESLPEKIWLKKQFAVGVNEVTRVLERMKPSGDSASITNPNYKACTVKLQAILL
        MGKKAKSS   A VQSK +  SYEGERLDELLQSIQREIKRAR LNA+SLPEKIWLKKQFA+GVNEVTRVLERM PS DSA + NPNYKACTV+LQAILL
Subjt:  MGKKAKSS---ASVQSKPDPYSYEGERLDELLQSIQREIKRARVLNAESLPEKIWLKKQFAVGVNEVTRVLERMKPSGDSASITNPNYKACTVKLQAILL

Query:  TADCNPLWLTNHVPSLAISRKVPLILVKGKEGSLRLGQLVNLKTAIAIGIKANGSPVNQLIGEILQRT
        TADCNP WLTNHVPSLAISRKVPLILVK KEGSLRLG+LVNLKTAIAIGIK NGSPVNQLIGEIL RT
Subjt:  TADCNPLWLTNHVPSLAISRKVPLILVKGKEGSLRLGQLVNLKTAIAIGIKANGSPVNQLIGEILQRT

XP_023549838.1 ribonuclease P protein subunit p38 [Cucurbita pepo subsp. pepo]2.9e-7188.1Show/hide
Query:  MGKKAKSS---ASVQSKPDPYSYEGERLDELLQSIQREIKRARVLNAESLPEKIWLKKQFAVGVNEVTRVLERMKPSGDSASITNPNYKACTVKLQAILL
        MGKKAKSS   A VQSK +  SYEGERLDELLQSIQREIKRAR LNAE+LPEKIWLKKQFA+GVNEVTRVLERM PS DSA I NPNYKACTV+LQAILL
Subjt:  MGKKAKSS---ASVQSKPDPYSYEGERLDELLQSIQREIKRARVLNAESLPEKIWLKKQFAVGVNEVTRVLERMKPSGDSASITNPNYKACTVKLQAILL

Query:  TADCNPLWLTNHVPSLAISRKVPLILVKGKEGSLRLGQLVNLKTAIAIGIKANGSPVNQLIGEILQRT
        TADCNP WLTNHVPSLAISRKVPLILVK KEGSLRLG+LVNLKTAIAIGIKANGSP+NQLIGEILQRT
Subjt:  TADCNPLWLTNHVPSLAISRKVPLILVKGKEGSLRLGQLVNLKTAIAIGIKANGSPVNQLIGEILQRT

XP_038875290.1 ribonuclease P protein subunit p38 [Benincasa hispida]4.2e-7086.83Show/hide
Query:  MGKKAKSSAS---VQSKPDPYSYEGERLDELLQSIQREIKRARVLNAESLPEKIWLKKQFAVGVNEVTRVLERMKPSGDSASITNPNYKACTVKLQAILL
        MGKKAKSSA    +QSKP+  SYEGERLDE LQSIQREIK AR LNAESLPEKIWLKKQFA+GVNEVTRVLERM PSGDSA I NPNYKACTVKLQA+LL
Subjt:  MGKKAKSSAS---VQSKPDPYSYEGERLDELLQSIQREIKRARVLNAESLPEKIWLKKQFAVGVNEVTRVLERMKPSGDSASITNPNYKACTVKLQAILL

Query:  TADCNPLWLTNHVPSLAISRKVPLILVKGKEGSLRLGQLVNLKTAIAIGIKANGSPVNQLIGEILQR
        TA+CNP WLTNHVPSLA+SRKVPLILVK KEGSLRLG+LVNLKTAIAIGIKANGSPVNQLI EILQR
Subjt:  TADCNPLWLTNHVPSLAISRKVPLILVKGKEGSLRLGQLVNLKTAIAIGIKANGSPVNQLIGEILQR

TrEMBL top hitse value%identityAlignment
A0A1S3CQV2 ribonuclease P protein subunit p38 isoform X53.4e-6580.7Show/hide
Query:  MGKKAKSS----ASVQSKP-DPYSYEGERLDELLQSIQREIKRARVLNAESLPEKIWLKKQFAVGVNEVTRVLERMKPSGDSASITNPNYKACTVKLQAI
        MGK  KSS    A++QSKP +  SYEGERLDELL SIQREIK AR LNAESLPEK WLKKQFA+GVNEVTR LERM P GDSA + NPNYKAC VKLQAI
Subjt:  MGKKAKSS----ASVQSKP-DPYSYEGERLDELLQSIQREIKRARVLNAESLPEKIWLKKQFAVGVNEVTRVLERMKPSGDSASITNPNYKACTVKLQAI

Query:  LLTADCNPLWLTNHVPSLAISRKVPLILVKGKEGSLRLGQLVNLKTAIAIGIKANGSPVNQLIGEILQRTR
        LLTA+CNP WLTNHVP LA+SRKVPLILVK KEGSLRLG+LVNLKTAIAIGIK+NGSPVNQLI EILQRT+
Subjt:  LLTADCNPLWLTNHVPSLAISRKVPLILVKGKEGSLRLGQLVNLKTAIAIGIKANGSPVNQLIGEILQRTR

A0A1S3CR39 ribonuclease P protein subunit p38 isoform X66.8e-6681.18Show/hide
Query:  MGKKAKSS----ASVQSKPDPYSYEGERLDELLQSIQREIKRARVLNAESLPEKIWLKKQFAVGVNEVTRVLERMKPSGDSASITNPNYKACTVKLQAIL
        MGK  KSS    A++QSKP   SYEGERLDELL SIQREIK AR LNAESLPEK WLKKQFA+GVNEVTR LERM P GDSA + NPNYKAC VKLQAIL
Subjt:  MGKKAKSS----ASVQSKPDPYSYEGERLDELLQSIQREIKRARVLNAESLPEKIWLKKQFAVGVNEVTRVLERMKPSGDSASITNPNYKACTVKLQAIL

Query:  LTADCNPLWLTNHVPSLAISRKVPLILVKGKEGSLRLGQLVNLKTAIAIGIKANGSPVNQLIGEILQRTR
        LTA+CNP WLTNHVP LA+SRKVPLILVK KEGSLRLG+LVNLKTAIAIGIK+NGSPVNQLI EILQRT+
Subjt:  LTADCNPLWLTNHVPSLAISRKVPLILVKGKEGSLRLGQLVNLKTAIAIGIKANGSPVNQLIGEILQRTR

A0A6J1CZ90 ribonuclease P protein subunit p386.8e-6681.55Show/hide
Query:  MGKKAKSSAS---VQSKPDPYSYEGERLDELLQSIQREIKRARVLNAESLPEKIWLKKQFAVGVNEVTRVLERMKPSGDSASITNPNYKACTVKLQAILL
        MGKKAKSSA+   V+SK     YEG+RLDELLQSIQREIKRAR+LNAESLP KIWLKKQFAVGVNEVTRVLERM PSGDSA I NPNYKACTV+LQAILL
Subjt:  MGKKAKSSAS---VQSKPDPYSYEGERLDELLQSIQREIKRARVLNAESLPEKIWLKKQFAVGVNEVTRVLERMKPSGDSASITNPNYKACTVKLQAILL

Query:  TADCNPLWLTNHVPSLAISRKVPLILVKGKEGSLRLGQLVNLKTAIAIGIKANGSPVNQLIGEILQRT
          DCNP WLTNH+P+LA+SR VPL+L+K KEGSLRLG+LVNLKTAIAIGIKANGS +NQLIGEILQ T
Subjt:  TADCNPLWLTNHVPSLAISRKVPLILVKGKEGSLRLGQLVNLKTAIAIGIKANGSPVNQLIGEILQRT

A0A6J1FDN9 ribonuclease P protein subunit p385.7e-7389.88Show/hide
Query:  MGKKAKSS---ASVQSKPDPYSYEGERLDELLQSIQREIKRARVLNAESLPEKIWLKKQFAVGVNEVTRVLERMKPSGDSASITNPNYKACTVKLQAILL
        MGKKAKSS   A VQSK +  SYEGERLDELLQSIQREIKRAR LNAESLPEKIWLKKQFA+GVNEVTRVLERM PSGDSA I NPNYKACTV+LQAILL
Subjt:  MGKKAKSS---ASVQSKPDPYSYEGERLDELLQSIQREIKRARVLNAESLPEKIWLKKQFAVGVNEVTRVLERMKPSGDSASITNPNYKACTVKLQAILL

Query:  TADCNPLWLTNHVPSLAISRKVPLILVKGKEGSLRLGQLVNLKTAIAIGIKANGSPVNQLIGEILQRT
        TADCNP WLTNHVPSLAISRKVPLILVK KEGSLRLG+LVNLKTAIAIGIKANGSPVNQLIGEILQRT
Subjt:  TADCNPLWLTNHVPSLAISRKVPLILVKGKEGSLRLGQLVNLKTAIAIGIKANGSPVNQLIGEILQRT

A0A6J1K3C5 ribonuclease P protein subunit p381.1e-6886.9Show/hide
Query:  MGKKAKSS---ASVQSKPDPYSYEGERLDELLQSIQREIKRARVLNAESLPEKIWLKKQFAVGVNEVTRVLERMKPSGDSASITNPNYKACTVKLQAILL
        MGKKAKSS   A VQSK +  SYEGERLDELLQSIQREIKRAR LNA+SLPEKIWLKKQFA+GVNEVTRVLERM PS DSA + NPNYKACTV+LQAILL
Subjt:  MGKKAKSS---ASVQSKPDPYSYEGERLDELLQSIQREIKRARVLNAESLPEKIWLKKQFAVGVNEVTRVLERMKPSGDSASITNPNYKACTVKLQAILL

Query:  TADCNPLWLTNHVPSLAISRKVPLILVKGKEGSLRLGQLVNLKTAIAIGIKANGSPVNQLIGEILQRT
        TADCNP WLTNHVPSLAISRKVPLILVK KEGSLRLG+LVNLKTAIAIGIK NGSPVNQLIGEIL RT
Subjt:  TADCNPLWLTNHVPSLAISRKVPLILVKGKEGSLRLGQLVNLKTAIAIGIKANGSPVNQLIGEILQRT

SwissProt top hitse value%identityAlignment
P78345 Ribonuclease P protein subunit p381.9e-0429.46Show/hide
Query:  LKKQFAVGVNEVTRVLERMKPSGDSASITNPNYKACTVKLQAILLTADCNPLWLTNHVPSLAISRKVPLILVKGKEGSLRLGQLVNLKTAIAIGIKANGS
        ++KQ A+GVNEVTR LER                    +L  +L+     P  +T+H+  L++SR VP   V     S R+  ++ LK  +A+  K N +
Subjt:  LKKQFAVGVNEVTRVLERMKPSGDSASITNPNYKACTVKLQAILLTADCNPLWLTNHVPSLAISRKVPLILVKGKEGSLRLGQLVNLKTAIAIGIKANGS

Query:  PVNQLIGEILQR
             +  I+ R
Subjt:  PVNQLIGEILQR

Q32LC1 Ribonuclease P protein subunit p381.1e-0431.25Show/hide
Query:  LKKQFAVGVNEVTRVLERMKPSGDSASITNPNYKACTVKLQAILLTADCNPLWLTNHVPSLAISRKVPLILVKGKEGSLRLGQLVNLKTAIAIGIKANGS
        ++KQ A+G+NEVTR LER                    +L   L      P  +T+H+  L++SR VP   V     S RL  ++ LK  +A+G K N +
Subjt:  LKKQFAVGVNEVTRVLERMKPSGDSASITNPNYKACTVKLQAILLTADCNPLWLTNHVPSLAISRKVPLILVKGKEGSLRLGQLVNLKTAIAIGIKANGS

Query:  PVNQLIGEILQR
           + +  IL R
Subjt:  PVNQLIGEILQR

Q80UU2 Ribonuclease P protein subunit p389.3e-0430Show/hide
Query:  IWLKKQFAVGVNEVTRVLERMKPSGDSASITNPNYKACTVKLQAILLTADCNPLWLTNHVPSLAISRKVPLILVKGKEGSLRLGQLVNLKTAIAIGIKAN
        + ++KQ  +GVNEVTR LER                    +L  +L+     P  +T+H+  L++SR VP   V   + S R+  ++ LK  +A+G + N
Subjt:  IWLKKQFAVGVNEVTRVLERMKPSGDSASITNPNYKACTVKLQAILLTADCNPLWLTNHVPSLAISRKVPLILVKGKEGSLRLGQLVNLKTAIAIGIKAN

Arabidopsis top hitse value%identityAlignment
AT4G01790.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein7.7e-3856.16Show/hide
Query:  YEGERLDELLQSIQREIKRARVLNAESLPEKIWLKKQFAVGVNEVTRVLERMKPSGDSASITNPNYKACTVKLQAILLTADCNPLWLTNHVPSLAISRKV
        YEGERL  LL  IQR I+ +++ N  SLPEKIWLKKQ A+G+NEVTRVLERM P+  S    NP       +LQ ++L ADC P  LT H+P+LA SR V
Subjt:  YEGERLDELLQSIQREIKRARVLNAESLPEKIWLKKQFAVGVNEVTRVLERMKPSGDSASITNPNYKACTVKLQAILLTADCNPLWLTNHVPSLAISRKV

Query:  PLILVK-GKEGSLRLGQLVNLKTAIAIGIKANGSPVNQLIGEILQR
        P++ V+  K  SLRLG+LV LKTA+AIGIKA G+ +N L+ +IL R
Subjt:  PLILVK-GKEGSLRLGQLVNLKTAIAIGIKANGSPVNQLIGEILQR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAGAAGGCTAAATCTTCTGCTTCTGTTCAATCCAAGCCTGACCCATATTCCTATGAAGGGGAACGTCTCGATGAGTTGCTACAGTCGATTCAGAGGGAGATAAA
GCGAGCAAGAGTTCTGAATGCGGAATCCTTGCCGGAAAAAATTTGGCTCAAGAAACAATTCGCAGTTGGAGTTAATGAGGTTACTAGAGTCCTTGAACGGATGAAGCCAA
GTGGAGATTCTGCTAGCATAACGAACCCTAATTATAAGGCGTGTACAGTCAAGCTTCAGGCTATACTGTTAACTGCTGATTGCAACCCTCTATGGCTGACAAACCATGTG
CCAAGCTTGGCCATATCTAGGAAGGTACCATTGATACTCGTGAAAGGTAAAGAAGGATCTTTAAGGTTAGGTCAACTCGTCAACCTTAAAACAGCAATTGCAATTGGAAT
AAAGGCGAATGGGAGCCCTGTTAATCAACTTATTGGTGAAATTCTTCAACGAACAAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAGAAGGCTAAATCTTCTGCTTCTGTTCAATCCAAGCCTGACCCATATTCCTATGAAGGGGAACGTCTCGATGAGTTGCTACAGTCGATTCAGAGGGAGATAAA
GCGAGCAAGAGTTCTGAATGCGGAATCCTTGCCGGAAAAAATTTGGCTCAAGAAACAATTCGCAGTTGGAGTTAATGAGGTTACTAGAGTCCTTGAACGGATGAAGCCAA
GTGGAGATTCTGCTAGCATAACGAACCCTAATTATAAGGCGTGTACAGTCAAGCTTCAGGCTATACTGTTAACTGCTGATTGCAACCCTCTATGGCTGACAAACCATGTG
CCAAGCTTGGCCATATCTAGGAAGGTACCATTGATACTCGTGAAAGGTAAAGAAGGATCTTTAAGGTTAGGTCAACTCGTCAACCTTAAAACAGCAATTGCAATTGGAAT
AAAGGCGAATGGGAGCCCTGTTAATCAACTTATTGGTGAAATTCTTCAACGAACAAGATAG
Protein sequenceShow/hide protein sequence
MGKKAKSSASVQSKPDPYSYEGERLDELLQSIQREIKRARVLNAESLPEKIWLKKQFAVGVNEVTRVLERMKPSGDSASITNPNYKACTVKLQAILLTADCNPLWLTNHV
PSLAISRKVPLILVKGKEGSLRLGQLVNLKTAIAIGIKANGSPVNQLIGEILQRTR