; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0029661 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029661
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr8:40959184..40960860
RNA-Seq ExpressionLag0029661
SyntenyLag0029661
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152370.1 uncharacterized protein LOC111020115 [Momordica charantia]3.5e-2536.56Show/hide
Query:  ISGLQDEKLLNSVGEDQPRTYAEFVSRAQKYINAEELKRSKRAKREAQRVTTIDKGRR-KDERGKRPREEDENRGRLRYSSGWSRPEQREGRDRPELRGR
        ++GL DE L   +GE+ P T+ E + +A+K I+ +EL R K  + E +    IDKGR  KD+     + +D+          + R +    R RP     
Subjt:  ISGLQDEKLLNSVGEDQPRTYAEFVSRAQKYINAEELKRSKRAKREAQRVTTIDKGRR-KDERGKRPREEDENRGRLRYSSGWSRPEQREGRDRPELRGR

Query:  FEKYTPRSVPPNQVLAAIHHTD---LLKHSDRLKEDPDRRDKSKYCYFHRDHGHTTRNCIHLRDKIESLIKEGYLKEFVKGEESN----KPRSTRGDRNE
        +E+YTP ++P +++L  I  ++   LLK  ++L+ DP++R+K KYC FHRDHGH+T NC  L+ +IE LI++ Y K+FV    SN    K    R     
Subjt:  FEKYTPRSVPPNQVLAAIHHTD---LLKHSDRLKEDPDRRDKSKYCYFHRDHGHTTRNCIHLRDKIESLIKEGYLKEFVKGEESN----KPRSTRGDRNE

Query:  GDNDPPLEIKTILGGPAGGESNGKGRQ
           D P  I TI GGP+GG+S  K ++
Subjt:  GDNDPPLEIKTILGGPAGGESNGKGRQ

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]2.3e-2940.43Show/hide
Query:  EAKVKVGRGYDDGVTLTAVISGLQDEKLLNSVGEDQPRTYAEFVSRAQKYINAEELKRSKRAKREAQRVTTIDKGRRKDERGKRPREEDENRGRLRYSSG
        E K++V  G  D V+L A +SG++DE L  S G+  P T++E +SRAQ+Y++A E   SKR             G+R D   KR R  D+ +G     S 
Subjt:  EAKVKVGRGYDDGVTLTAVISGLQDEKLLNSVGEDQPRTYAEFVSRAQKYINAEELKRSKRAKREAQRVTTIDKGRRKDERGKRPREEDENRGRLRYSSG

Query:  WSRPEQREGRDRPELRGRFEKYTPRSVPPNQVLAAIHHTDLLKHSDRLKEDPDRRDKSKYCYFHRDHGHTTRNCIHLRDKIESLIKEGYLKEFVKGEESN
        W + ++   +D P    +FEKYTP +VP  QVL  I    LLK  +R+K    +R K +YC FHRDHGH T++C  L++++E LI+ GYLKE+V+     
Subjt:  WSRPEQREGRDRPELRGRFEKYTPRSVPPNQVLAAIHHTDLLKHSDRLKEDPDRRDKSKYCYFHRDHGHTTRNCIHLRDKIESLIKEGYLKEFVKGEESN

Query:  KPRSTRGDRNEGDNDPPLEIKTILGGPAGGESNGK
        +P++T+    E D  P  EI+TI+GGP   ES  K
Subjt:  KPRSTRGDRNEGDNDPPLEIKTILGGPAGGESNGK

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]2.4e-2639.63Show/hide
Query:  ISGLQDEKLLNSVGEDQPRTYAEFVSRAQKYINAEELKRSKRAKREAQRVTTIDKGRRKDERGKRPREEDENRGRLRYSSGWSRPEQREGRDRPELRGRF
        +SG++DE L  S G+  P T+AE +SRAQKY++AEE    K                 K+  GKR  ++ E  G    SS W + ++  G  + +L  +F
Subjt:  ISGLQDEKLLNSVGEDQPRTYAEFVSRAQKYINAEELKRSKRAKREAQRVTTIDKGRRKDERGKRPREEDENRGRLRYSSGWSRPEQREGRDRPELRGRF

Query:  EKYTPRSVPPNQVLAAIHHTDLLKHSDRLKEDPDRRDKSKYCYFHRDHGHTTRNCIHLRDKIESLIKEGYLKEFVKGEESNKPRSTRGDRNEGDN-DPPL
        EKYTP +VP  QVL  I    LLK  + +K  P++R K +YC FHRDHGH T +C  L++++E LI++GYLKE+V   ++   R       E DN  P  
Subjt:  EKYTPRSVPPNQVLAAIHHTDLLKHSDRLKEDPDRRDKSKYCYFHRDHGHTTRNCIHLRDKIESLIKEGYLKEFVKGEESNKPRSTRGDRNEGDN-DPPL

Query:  EIKTILGGPAGGESNGK
        EI+TI+GG    ES+ K
Subjt:  EIKTILGGPAGGESNGK

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]1.6e-2538.84Show/hide
Query:  DGVTLTAVISGLQDEKLLNSVGEDQPRTYAEFVSRAQKYINAEELKRSKRAKREAQRVTTIDKGRRKDERGKRPREEDENRGRLRYSSGWSRPEQREGRD
        D V+L A +SG++DE L  S G+  P T++E +SRAQ+Y++A E   SKR             G+R D+  KR R  D+ +G     S W + ++   +D
Subjt:  DGVTLTAVISGLQDEKLLNSVGEDQPRTYAEFVSRAQKYINAEELKRSKRAKREAQRVTTIDKGRRKDERGKRPREEDENRGRLRYSSGWSRPEQREGRD

Query:  RPELRGRFEKYTPRSVPPNQVLAAIHHTDLLKHSDRLKEDPDRRDKSKYCYFHRDHGHTTRNCIHLRDKIESLIKEGYLKEFVKGEESNKPRSTRGDRNE
         P    +FEKYTP +VP  QVL  I    LLK  +R+K    +R K +YC FHRDH H T++   L++++E LI+ GYL+E+V+     +P++T+    E
Subjt:  RPELRGRFEKYTPRSVPPNQVLAAIHHTDLLKHSDRLKEDPDRRDKSKYCYFHRDHGHTTRNCIHLRDKIESLIKEGYLKEFVKGEESNKPRSTRGDRNE

Query:  GDNDPPLEIKTILGGPAGGESNGK
         +  P  EI+TI+GGP   ES  K
Subjt:  GDNDPPLEIKTILGGPAGGESNGK

XP_024041095.1 uncharacterized protein LOC112098853 [Citrus clementina]1.3e-2734.36Show/hide
Query:  GYDDGVTLTAVISGLQDEKLLNSVGEDQPRTYAEFVSRAQKYINAEELKRSKRAKREAQRVTTIDKGRRK--DERGKRPREEDENRGRLRYSSGWSRPEQ
        GYDDG+ L+ ++ GL+  KL  SV +  P +Y+E ++RA+KY NAEE     R K   Q      KG++K  D+R +R    D++  R ++  G    E+
Subjt:  GYDDGVTLTAVISGLQDEKLLNSVGEDQPRTYAEFVSRAQKYINAEELKRSKRAKREAQRVTTIDKGRRK--DERGKRPREEDENRGRLRYSSGWSRPEQ

Query:  REGRD-RPELRGRFEKYTPRSVPPNQVLAAIHHTDLLKHSDRLKEDPDRRDKSKYCYFHRDHGHTTRNCIHLRDKIESLIKEGYLKEFVKGEE----SNK
         E RD RP L  +F  +T  + P  Q+L  + +  L +    +K +P RR+ +KYC+FH+DHGH T  C  L+++IESL+++G L+E+V+  E    S +
Subjt:  REGRD-RPELRGRFEKYTPRSVPPNQVLAAIHHTDLLKHSDRLKEDPDRRDKSKYCYFHRDHGHTTRNCIHLRDKIESLIKEGYLKEFVKGEE----SNK

Query:  PRST---RGDRNEGDNDPPLEIKTILGGPAGGESN-------GKGRQQPEGQGLSLKSK
        P S+   +G + E  ++   ++  I GGPA G+S         + R +P G  ++L ++
Subjt:  PRST---RGDRNEGDNDPPLEIKTILGGPAGGESN-------GKGRQQPEGQGLSLKSK

TrEMBL top hitse value%identityAlignment
A0A2N9F118 Ribonuclease H9.9e-2638.98Show/hide
Query:  GYDDGVTLTAVISGLQDEKLLNSVGEDQPRTYAEFVSRAQKYINAEE--LKRSKRAKREAQRVTTIDKGRRKDERGKRPREEDENRGRLRYSSGWSRPEQ
        G DD V LTA ISGLQ    L SV +D P T  E +  AQ+Y+N EE  L R +   +           +RK +   RP E  E R + + +    R E+
Subjt:  GYDDGVTLTAVISGLQDEKLLNSVGEDQPRTYAEFVSRAQKYINAEE--LKRSKRAKREAQRVTTIDKGRRKDERGKRPREEDENRGRLRYSSGWSRPEQ

Query:  REGRDRPELRGRFEKYTPRSVPPNQVLAAIHHTDLLKHSDRLKEDPDRRDKSKYCYFHRDHGHTTRNCIHLRDKIESLIKEGYLKEFV-KGEESNKPRST
        R GR   E   RF ++TP + P + +   I +   LK   +L  DPD+R + KYC FHRDHGH T NC  L+ +IE LIK+G L+ F+ KG+   +P+  
Subjt:  REGRDRPELRGRFEKYTPRSVPPNQVLAAIHHTDLLKHSDRLKEDPDRRDKSKYCYFHRDHGHTTRNCIHLRDKIESLIKEGYLKEFV-KGEESNKPRST

Query:  RGDRNEGDND--PPL-EIKTILGGPAGGESNGKGRQ
        R  R  G+    PPL EI  I GG A G ++   R+
Subjt:  RGDRNEGDND--PPL-EIKTILGGPAGGESNGKGRQ

A0A2N9G5U1 Ribonuclease H9.9e-2638.98Show/hide
Query:  GYDDGVTLTAVISGLQDEKLLNSVGEDQPRTYAEFVSRAQKYINAEE--LKRSKRAKREAQRVTTIDKGRRKDERGKRPREEDENRGRLRYSSGWSRPEQ
        G DD V LTA ISGLQ    L SV +D P T  E +  AQ+Y+N EE  L R +   +           +RK +   RP E  E R + + +    R E+
Subjt:  GYDDGVTLTAVISGLQDEKLLNSVGEDQPRTYAEFVSRAQKYINAEE--LKRSKRAKREAQRVTTIDKGRRKDERGKRPREEDENRGRLRYSSGWSRPEQ

Query:  REGRDRPELRGRFEKYTPRSVPPNQVLAAIHHTDLLKHSDRLKEDPDRRDKSKYCYFHRDHGHTTRNCIHLRDKIESLIKEGYLKEFV-KGEESNKPRST
        R GR   E   RF ++TP + P + +   I +   LK   +L  DPD+R + KYC FHRDHGH T NC  L+ +IE LIK+G L+ F+ KG+   +P+  
Subjt:  REGRDRPELRGRFEKYTPRSVPPNQVLAAIHHTDLLKHSDRLKEDPDRRDKSKYCYFHRDHGHTTRNCIHLRDKIESLIKEGYLKEFV-KGEESNKPRST

Query:  RGDRNEGDND--PPL-EIKTILGGPAGGESNGKGRQ
        R  R  G+    PPL EI  I GG A G ++   R+
Subjt:  RGDRNEGDND--PPL-EIKTILGGPAGGESNGKGRQ

A0A6J1DWY0 uncharacterized protein LOC1110252931.1e-2940.43Show/hide
Query:  EAKVKVGRGYDDGVTLTAVISGLQDEKLLNSVGEDQPRTYAEFVSRAQKYINAEELKRSKRAKREAQRVTTIDKGRRKDERGKRPREEDENRGRLRYSSG
        E K++V  G  D V+L A +SG++DE L  S G+  P T++E +SRAQ+Y++A E   SKR             G+R D   KR R  D+ +G     S 
Subjt:  EAKVKVGRGYDDGVTLTAVISGLQDEKLLNSVGEDQPRTYAEFVSRAQKYINAEELKRSKRAKREAQRVTTIDKGRRKDERGKRPREEDENRGRLRYSSG

Query:  WSRPEQREGRDRPELRGRFEKYTPRSVPPNQVLAAIHHTDLLKHSDRLKEDPDRRDKSKYCYFHRDHGHTTRNCIHLRDKIESLIKEGYLKEFVKGEESN
        W + ++   +D P    +FEKYTP +VP  QVL  I    LLK  +R+K    +R K +YC FHRDHGH T++C  L++++E LI+ GYLKE+V+     
Subjt:  WSRPEQREGRDRPELRGRFEKYTPRSVPPNQVLAAIHHTDLLKHSDRLKEDPDRRDKSKYCYFHRDHGHTTRNCIHLRDKIESLIKEGYLKEFVKGEESN

Query:  KPRSTRGDRNEGDNDPPLEIKTILGGPAGGESNGK
        +P++T+    E D  P  EI+TI+GGP   ES  K
Subjt:  KPRSTRGDRNEGDNDPPLEIKTILGGPAGGESNGK

A0A6J1DYL6 uncharacterized protein LOC1110257857.6e-2638.84Show/hide
Query:  DGVTLTAVISGLQDEKLLNSVGEDQPRTYAEFVSRAQKYINAEELKRSKRAKREAQRVTTIDKGRRKDERGKRPREEDENRGRLRYSSGWSRPEQREGRD
        D V+L A +SG++DE L  S G+  P T++E +SRAQ+Y++A E   SKR             G+R D+  KR R  D+ +G     S W + ++   +D
Subjt:  DGVTLTAVISGLQDEKLLNSVGEDQPRTYAEFVSRAQKYINAEELKRSKRAKREAQRVTTIDKGRRKDERGKRPREEDENRGRLRYSSGWSRPEQREGRD

Query:  RPELRGRFEKYTPRSVPPNQVLAAIHHTDLLKHSDRLKEDPDRRDKSKYCYFHRDHGHTTRNCIHLRDKIESLIKEGYLKEFVKGEESNKPRSTRGDRNE
         P    +FEKYTP +VP  QVL  I    LLK  +R+K    +R K +YC FHRDH H T++   L++++E LI+ GYL+E+V+     +P++T+    E
Subjt:  RPELRGRFEKYTPRSVPPNQVLAAIHHTDLLKHSDRLKEDPDRRDKSKYCYFHRDHGHTTRNCIHLRDKIESLIKEGYLKEFVKGEESNKPRSTRGDRNE

Query:  GDNDPPLEIKTILGGPAGGESNGK
         +  P  EI+TI+GGP   ES  K
Subjt:  GDNDPPLEIKTILGGPAGGESNGK

A0A6J1DZ52 uncharacterized protein LOC1110256121.2e-2639.63Show/hide
Query:  ISGLQDEKLLNSVGEDQPRTYAEFVSRAQKYINAEELKRSKRAKREAQRVTTIDKGRRKDERGKRPREEDENRGRLRYSSGWSRPEQREGRDRPELRGRF
        +SG++DE L  S G+  P T+AE +SRAQKY++AEE    K                 K+  GKR  ++ E  G    SS W + ++  G  + +L  +F
Subjt:  ISGLQDEKLLNSVGEDQPRTYAEFVSRAQKYINAEELKRSKRAKREAQRVTTIDKGRRKDERGKRPREEDENRGRLRYSSGWSRPEQREGRDRPELRGRF

Query:  EKYTPRSVPPNQVLAAIHHTDLLKHSDRLKEDPDRRDKSKYCYFHRDHGHTTRNCIHLRDKIESLIKEGYLKEFVKGEESNKPRSTRGDRNEGDN-DPPL
        EKYTP +VP  QVL  I    LLK  + +K  P++R K +YC FHRDHGH T +C  L++++E LI++GYLKE+V   ++   R       E DN  P  
Subjt:  EKYTPRSVPPNQVLAAIHHTDLLKHSDRLKEDPDRRDKSKYCYFHRDHGHTTRNCIHLRDKIESLIKEGYLKEFVKGEESNKPRSTRGDRNEGDN-DPPL

Query:  EIKTILGGPAGGESNGK
        EI+TI+GG    ES+ K
Subjt:  EIKTILGGPAGGESNGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTCCTTAGAGGAAGAATGAATGAGATGGGGCAGAGTTTGGCTGAGATTTTGGGTATCCTGAAGCAACCGAATCCAAGCACGAAGTACCATAAGAGTTTCGCGCG
AGATCGCGAGAAGGGAAAAGGGGTTTACGACGAGGAAGAAGAAGAAACAGATAGTGCAACCAGCAAGCCGCGCAAGCCGAGGGATGGCAAGGAACTTGCCTTGAAGGAGC
CAGGGCCAAGCAGAAGGGTAGACGCAAAGGCGCACTGGATGTCCCAGATGAGGTCAGTACGGTGGGTGCGCACAGGAGGTCGGAGCCGAGACGAGGCCATGGTTGAGGCC
AAGATGCGAGAGAAGTTTGAGCTTGAAACAAAGATCCGGGCCGAGATTGAAGGTAAGCTGAGAGCCGAAGCCGAAGCTGCGGCCAAAGCAAAGGTCGAGGTCGAGGCCGA
GGCTAAGGTCAAGGTTGGTAGGGGGTATGATGATGGAGTAACACTAACCGCAGTTATCTCAGGGCTACAAGATGAAAAACTGTTGAATTCCGTAGGGGAGGATCAACCGC
GAACGTACGCTGAGTTTGTCTCCAGGGCGCAAAAGTATATAAATGCAGAGGAGCTGAAGAGATCCAAGCGGGCGAAAAGAGAAGCGCAGAGGGTAACCACAATCGACAAG
GGCAGAAGAAAAGATGAGAGGGGCAAGAGGCCGCGGGAAGAGGACGAAAACCGGGGCCGCCTCAGGTATTCCTCTGGTTGGAGCCGACCTGAGCAGCGGGAAGGCCGAGA
CCGACCAGAACTCAGGGGTAGATTTGAGAAGTACACTCCACGCTCTGTCCCACCCAACCAGGTTCTGGCTGCGATTCACCATACAGATTTGTTGAAACATTCGGATAGGC
TGAAAGAGGATCCCGATAGAAGGGATAAGAGCAAATATTGTTACTTCCATCGGGATCATGGTCATACAACGCGCAATTGCATACATCTTCGAGACAAGATAGAGAGCCTG
ATCAAGGAGGGGTATCTGAAGGAATTTGTGAAGGGTGAGGAGAGCAATAAGCCGAGGTCGACCAGGGGCGATCGCAATGAGGGAGATAATGACCCGCCACTGGAAATCAA
AACAATTTTGGGAGGACCAGCAGGTGGAGAATCGAACGGAAAAGGAAGGCAACAGCCCGAGGGGCAAGGTTTGAGCTTGAAGAGCAAGGGATATACTCATTACAGGTTTC
AAATAGGTTGTCGTCGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTCCTTAGAGGAAGAATGAATGAGATGGGGCAGAGTTTGGCTGAGATTTTGGGTATCCTGAAGCAACCGAATCCAAGCACGAAGTACCATAAGAGTTTCGCGCG
AGATCGCGAGAAGGGAAAAGGGGTTTACGACGAGGAAGAAGAAGAAACAGATAGTGCAACCAGCAAGCCGCGCAAGCCGAGGGATGGCAAGGAACTTGCCTTGAAGGAGC
CAGGGCCAAGCAGAAGGGTAGACGCAAAGGCGCACTGGATGTCCCAGATGAGGTCAGTACGGTGGGTGCGCACAGGAGGTCGGAGCCGAGACGAGGCCATGGTTGAGGCC
AAGATGCGAGAGAAGTTTGAGCTTGAAACAAAGATCCGGGCCGAGATTGAAGGTAAGCTGAGAGCCGAAGCCGAAGCTGCGGCCAAAGCAAAGGTCGAGGTCGAGGCCGA
GGCTAAGGTCAAGGTTGGTAGGGGGTATGATGATGGAGTAACACTAACCGCAGTTATCTCAGGGCTACAAGATGAAAAACTGTTGAATTCCGTAGGGGAGGATCAACCGC
GAACGTACGCTGAGTTTGTCTCCAGGGCGCAAAAGTATATAAATGCAGAGGAGCTGAAGAGATCCAAGCGGGCGAAAAGAGAAGCGCAGAGGGTAACCACAATCGACAAG
GGCAGAAGAAAAGATGAGAGGGGCAAGAGGCCGCGGGAAGAGGACGAAAACCGGGGCCGCCTCAGGTATTCCTCTGGTTGGAGCCGACCTGAGCAGCGGGAAGGCCGAGA
CCGACCAGAACTCAGGGGTAGATTTGAGAAGTACACTCCACGCTCTGTCCCACCCAACCAGGTTCTGGCTGCGATTCACCATACAGATTTGTTGAAACATTCGGATAGGC
TGAAAGAGGATCCCGATAGAAGGGATAAGAGCAAATATTGTTACTTCCATCGGGATCATGGTCATACAACGCGCAATTGCATACATCTTCGAGACAAGATAGAGAGCCTG
ATCAAGGAGGGGTATCTGAAGGAATTTGTGAAGGGTGAGGAGAGCAATAAGCCGAGGTCGACCAGGGGCGATCGCAATGAGGGAGATAATGACCCGCCACTGGAAATCAA
AACAATTTTGGGAGGACCAGCAGGTGGAGAATCGAACGGAAAAGGAAGGCAACAGCCCGAGGGGCAAGGTTTGAGCTTGAAGAGCAAGGGATATACTCATTACAGGTTTC
AAATAGGTTGTCGTCGGTAG
Protein sequenceShow/hide protein sequence
MEVLRGRMNEMGQSLAEILGILKQPNPSTKYHKSFARDREKGKGVYDEEEEETDSATSKPRKPRDGKELALKEPGPSRRVDAKAHWMSQMRSVRWVRTGGRSRDEAMVEA
KMREKFELETKIRAEIEGKLRAEAEAAAKAKVEVEAEAKVKVGRGYDDGVTLTAVISGLQDEKLLNSVGEDQPRTYAEFVSRAQKYINAEELKRSKRAKREAQRVTTIDK
GRRKDERGKRPREEDENRGRLRYSSGWSRPEQREGRDRPELRGRFEKYTPRSVPPNQVLAAIHHTDLLKHSDRLKEDPDRRDKSKYCYFHRDHGHTTRNCIHLRDKIESL
IKEGYLKEFVKGEESNKPRSTRGDRNEGDNDPPLEIKTILGGPAGGESNGKGRQQPEGQGLSLKSKGYTHYRFQIGCRR