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Lag0029692 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029692
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr8:41238391..41238929
RNA-Seq ExpressionLag0029692
SyntenyLag0029692
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4355279.1 hypothetical protein G4B88_004937 [Cannabis sativa]1.1e-0554Show/hide
Query:  ERYFSVNRLTESEKLEAAVLCLEGVALKWHYYEDKLGSFSNWGDFCRLLL
        ERYF + RLT  E+LEAAVLCLEG AL+W  +E++     NWG+   L+L
Subjt:  ERYFSVNRLTESEKLEAAVLCLEGVALKWHYYEDKLGSFSNWGDFCRLLL
KAF4380195.1 hypothetical protein G4B88_005652 [Cannabis sativa]1.5e-0554Show/hide
Query:  ERYFSVNRLTESEKLEAAVLCLEGVALKWHYYEDKLGSFSNWGDFCRLLL
        ERYF + RLT  E+LEAAVLCLEG AL+W  +E++     +WG+   LLL
Subjt:  ERYFSVNRLTESEKLEAAVLCLEGVALKWHYYEDKLGSFSNWGDFCRLLL
XP_028553339.1 uncharacterized protein LOC114580325 [Dendrobium catenatum]6.7e-0656.86Show/hide
Query:  VERYFSVNRLTESEKLEAAVLCLEGVALKWHYYEDKLGSFSNWGDFCRLLL
        VERYF VNRLT+ EKL AA LCLEG AL W+ + D+     NW +F   LL
Subjt:  VERYFSVNRLTESEKLEAAVLCLEGVALKWHYYEDKLGSFSNWGDFCRLLL
XP_030505320.1 uncharacterized protein LOC115720307 [Cannabis sativa]1.5e-0554Show/hide
Query:  ERYFSVNRLTESEKLEAAVLCLEGVALKWHYYEDKLGSFSNWGDFCRLLL
        ERYF + RLT  E+LEAAVLCLEG AL+W  +E++     +WG+   LLL
Subjt:  ERYFSVNRLTESEKLEAAVLCLEGVALKWHYYEDKLGSFSNWGDFCRLLL
XP_038904464.1 uncharacterized protein LOC120090832 [Benincasa hispida]2.7e-0755.77Show/hide
Query:  VERYFSVNRLTESEKLEAAVLCLEGVALKWHYYEDKLGSFSNWGDFCRLLLL
        VERYF VNRL+E +K+EAA+LCLEG AL+WH +E++    + W  F   LLL
Subjt:  VERYFSVNRLTESEKLEAAVLCLEGVALKWHYYEDKLGSFSNWGDFCRLLLL
TrEMBL top hitse value%identityAlignment
A0A1U8ARD0 uncharacterized protein LOC1046067719.5e-0654Show/hide
Query:  ERYFSVNRLTESEKLEAAVLCLEGVALKWHYYEDKLGSFSNWGDFCRLLL
        ERYF +N L  +E L AAV+CLEG AL W+Y+ED    F +W +F  LLL
Subjt:  ERYFSVNRLTESEKLEAAVLCLEGVALKWHYYEDKLGSFSNWGDFCRLLL
A0A5D3BD43 Aminoacyl-tRNA ligase7.3e-0654Show/hide
Query:  VERYFSVNRLTESEKLEAAVLCLEGVALKWHYYEDKLGSFSNWGDFCRLL
        VERYF VNRLTE +KL+ AVLC EG AL W  ++    S  +W +F +LL
Subjt:  VERYFSVNRLTESEKLEAAVLCLEGVALKWHYYEDKLGSFSNWGDFCRLL
A0A7J6EC33 Retrotrans_gag domain-containing protein5.6e-0654Show/hide
Query:  ERYFSVNRLTESEKLEAAVLCLEGVALKWHYYEDKLGSFSNWGDFCRLLL
        ERYF + RLT  E+LEAAVLCLEG AL+W  +E++     NWG+   L+L
Subjt:  ERYFSVNRLTESEKLEAAVLCLEGVALKWHYYEDKLGSFSNWGDFCRLLL
A0A7J6GB68 Retrotrans_gag domain-containing protein7.3e-0654Show/hide
Query:  ERYFSVNRLTESEKLEAAVLCLEGVALKWHYYEDKLGSFSNWGDFCRLLL
        ERYF + RLT  E+LEAAVLCLEG AL+W  +E++     +WG+   LLL
Subjt:  ERYFSVNRLTESEKLEAAVLCLEGVALKWHYYEDKLGSFSNWGDFCRLLL
A0A7J6H2W9 Retrotrans_gag domain-containing protein9.5e-0652Show/hide
Query:  ERYFSVNRLTESEKLEAAVLCLEGVALKWHYYEDKLGSFSNWGDFCRLLL
        ERYF + RLT  E+LEAA+LCLEG AL+W  +E++     +WG+   LLL
Subjt:  ERYFSVNRLTESEKLEAAVLCLEGVALKWHYYEDKLGSFSNWGDFCRLLL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67020.1 unknown protein2.5e-0647.06Show/hide
Query:  VERYFSVNRLTESEKLEAAVLCLEGVALKWHYYEDKLGSFSNWGDFCRLLL
        VER+F V R  +S+KL+   L LEGVALKW   E     F +W  F + LL
Subjt:  VERYFSVNRLTESEKLEAAVLCLEGVALKWHYYEDKLGSFSNWGDFCRLLL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGGAATTGAGCAAAGAAATGGTTGGGATGAGGCAAGAAATTTCCGGGATACGCGGATCAATCTCAACCGAAGTAGAAGCGGTTGTATCGAAGAGTGTGGGTGAGGC
TATGAAGAAAGGAATGCAGGCCATACTCGCGCAGATTGACGGATTGAAATCCACGGATCAAGCCGAGCAAAACAAAAAAACGAAGGGGAAGAACGTGGTCGGGTCTGACG
AAGTGGTCGTCGAAGTGGGAGAAGGAAGTAACACGGACCTACAATCGCACCTGAGCAAATCTCTAGCTCCGGTAGAGCGGTACTTTTCTGTCAATCGATTGACGGAATCG
GAGAAGCTGGAAGCGGCGGTGCTCTGTCTTGAAGGCGTAGCACTCAAATGGCACTATTACGAAGACAAACTAGGCTCGTTCAGTAATTGGGGAGATTTTTGTCGATTACT
GTTGTTGCCTTGTGCAAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGGAATTGAGCAAAGAAATGGTTGGGATGAGGCAAGAAATTTCCGGGATACGCGGATCAATCTCAACCGAAGTAGAAGCGGTTGTATCGAAGAGTGTGGGTGAGGC
TATGAAGAAAGGAATGCAGGCCATACTCGCGCAGATTGACGGATTGAAATCCACGGATCAAGCCGAGCAAAACAAAAAAACGAAGGGGAAGAACGTGGTCGGGTCTGACG
AAGTGGTCGTCGAAGTGGGAGAAGGAAGTAACACGGACCTACAATCGCACCTGAGCAAATCTCTAGCTCCGGTAGAGCGGTACTTTTCTGTCAATCGATTGACGGAATCG
GAGAAGCTGGAAGCGGCGGTGCTCTGTCTTGAAGGCGTAGCACTCAAATGGCACTATTACGAAGACAAACTAGGCTCGTTCAGTAATTGGGGAGATTTTTGTCGATTACT
GTTGTTGCCTTGTGCAAAGTGA
Protein sequenceShow/hide protein sequence
MLELSKEMVGMRQEISGIRGSISTEVEAVVSKSVGEAMKKGMQAILAQIDGLKSTDQAEQNKKTKGKNVVGSDEVVVEVGEGSNTDLQSHLSKSLAPVERYFSVNRLTES
EKLEAAVLCLEGVALKWHYYEDKLGSFSNWGDFCRLLLLPCAK