| GenBank top hits | e value | %identity | Alignment |
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| CAN78588.1 hypothetical protein VITISV_043911 [Vitis vinifera] | 3.1e-64 | 45.51 | Show/hide |
Query: KLGE--RLRKDTSGKSSEASSSSNPYKPLTETKYQNKRDRGLCFRCEVKFFPGHRCKKKELQVMIIHDREDEEAENGDEVAMQAVEMADNKNDEKPTEEE
K+GE + R G+ + + P K LTE++ Q +R++GL F+CE KF PGHRC KKEL+V+++H+ E+E+ DN+ D++ TEE
Subjt: KLGE--RLRKDTSGKSSEASSSSNPYKPLTETKYQNKRDRGLCFRCEVKFFPGHRCKKKELQVMIIHDREDEEAENGDEVAMQAVEMADNKNDEKPTEEE
Query: A--------ELALNSMVGLGSPKTLKVKGLIGSREVVVLIDSSATHNFIASPLVKELQLPTGQTEGYGVVLGTEGSSIKGTEICREVVLTLGPVTIVQDF
A EL+LNS+VGL +P T+K+KG IGS+EV++L+DS ATHNF++ LV++L LP T YGV++GT G S+KG ICR V +++ +T+V+DF
Subjt: A--------ELALNSMVGLGSPKTLKVKGLIGSREVVVLIDSSATHNFIASPLVKELQLPTGQTEGYGVVLGTEGSSIKGTEICREVVLTLGPVTIVQDF
Query: LPLPLGSADMILSVQWLSTLGDVMTNHQSLLMTFMLGKSSVVLQGDPSLVRSQGDITDSLSNGWEEVPECIRSVLVRHSSVFQPLPGLPPEHDGDHRIEL
LPL LG+ D+IL + WL TLGDV N + L M +GK+ +VL+GDPSL R++ T LS G +EVP+ ++ VL +H +F+P+ GLPP D DH I+L
Subjt: LPLPLGSADMILSVQWLSTLGDVMTNHQSLLMTFMLGKSSVVLQGDPSLVRSQGDITDSLSNGWEEVPECIRSVLVRHSSVFQPLPGLPPEHDGDHRIEL
Query: L
+
Subjt: L
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| RVW54082.1 Retrovirus-related Pol polyprotein from transposon 297 [Vitis vinifera] | 2.9e-62 | 43.59 | Show/hide |
Query: GKSSEASSSSNPYKPLTETKYQNKRDRGLCFRCEVKFFPGHRCKKKELQVMIIHDREDEEAENGDEVAMQAVEMADNKNDEKPTEEEA--------ELAL
G+ + + P K LTE++ Q +R++GLCF+CE KF PGHRC KKEL+V+++H E+E+ DN+ D++ TEE A EL+L
Subjt: GKSSEASSSSNPYKPLTETKYQNKRDRGLCFRCEVKFFPGHRCKKKELQVMIIHDREDEEAENGDEVAMQAVEMADNKNDEKPTEEEA--------ELAL
Query: NSMVGLGSPKTLKVKGLIGSREVVVLIDSSATHNFIASPLVKELQLPTGQTEGYGVVLGTEGSSIKGTEICREVVLTLGPVTIVQDFLPLPLGSADMILS
NS+VGL +P T+K+KG IGS+EV++L+DS ATHNF++ LV++L LP T YGV++GT G S+KG ICR V +++ +T+V+DFLPL LG+ D+IL
Subjt: NSMVGLGSPKTLKVKGLIGSREVVVLIDSSATHNFIASPLVKELQLPTGQTEGYGVVLGTEGSSIKGTEICREVVLTLGPVTIVQDFLPLPLGSADMILS
Query: VQWLSTLGDVMTNHQSLLMTFMLGKSSVVLQGDPSLVRS-----------------------QGDITDSLSNGWEEVPECIRSVLVRHSSVFQPLPGLPP
+ WL TLGDV N + L M +GK+ +VL+GDPSL R+ Q T LS G +EVP+ ++ VL +H +F+P+ GLPP
Subjt: VQWLSTLGDVMTNHQSLLMTFMLGKSSVVLQGDPSLVRS-----------------------QGDITDSLSNGWEEVPECIRSVLVRHSSVFQPLPGLPP
Query: EHDGDHRIELLP
D DH I+L+P
Subjt: EHDGDHRIELLP
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| RVW86019.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Vitis vinifera] | 2.1e-60 | 44.78 | Show/hide |
Query: LTETKYQNKRDRGLCFRCEVKFFPGHRCKKKELQVMIIHDREDEEAENGDEVAMQAVEMADNKNDEKPTEEEA--------ELALNSMVGLGSPKTLKVK
LTE++ Q R++GLCF+CE KF PGHRC KKELQV+++H+ E+E+ DN+ D + TEE A EL+LNS+VGL + T+K+K
Subjt: LTETKYQNKRDRGLCFRCEVKFFPGHRCKKKELQVMIIHDREDEEAENGDEVAMQAVEMADNKNDEKPTEEEA--------ELALNSMVGLGSPKTLKVK
Query: GLIGSREVVVLIDSSATHNFIASPLVKELQLPTGQTEGYGVVLGTEGSSIKGTEICREVVLTLGPVTIVQDFLPLPLGSADMILSVQWLSTLGDVMTNHQ
G IGS+EV++L+DS ATHNF++ LV++L LP T YGV++GT G S+KG ICR V + + +T+V+DFLPL LG+ D+IL + WL TLGDV N +
Subjt: GLIGSREVVVLIDSSATHNFIASPLVKELQLPTGQTEGYGVVLGTEGSSIKGTEICREVVLTLGPVTIVQDFLPLPLGSADMILSVQWLSTLGDVMTNHQ
Query: SLLMTFMLGKSSVVLQGDPSLVRS-----------------------QGDITDSLSNGWEEVPECIRSVLVRHSSVFQPLPGLPPEHDGDHRIELLP
L M +GK+ +VL+GDPSL R+ Q T LS G +EVP+ ++ VL +H +F+P+ GLPP D DH I+L+P
Subjt: SLLMTFMLGKSSVVLQGDPSLVRS-----------------------QGDITDSLSNGWEEVPECIRSVLVRHSSVFQPLPGLPPEHDGDHRIELLP
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| RVX15868.1 Retrovirus-related Pol polyprotein from transposon 297 [Vitis vinifera] | 4.0e-59 | 41.85 | Show/hide |
Query: KLGE--RLRKDTSGKSSEASSSSNPYKPLTETKYQNKRDRGLCFRCEVKFFPGHRCKKKELQVMIIHDREDEEAENGDEVAMQAVEMADNKNDEKPTEEE
K+GE + R G+ + + P K LTE++ Q +R++GLCF+CE KF PGHRC KK+L+V+++H+ ED++ DN+ D + TEE
Subjt: KLGE--RLRKDTSGKSSEASSSSNPYKPLTETKYQNKRDRGLCFRCEVKFFPGHRCKKKELQVMIIHDREDEEAENGDEVAMQAVEMADNKNDEKPTEEE
Query: A--------ELALNSMVGLGSPKTLKVKGLIGSREVVVLIDSSATHNFIASPLVKELQLPTGQTEGYGVVLGTEGSSIKGTEICREVVLTLGPVTIVQDF
A EL+LNS+VGL +P T+K+KG I S+EV++L+DS ATHNF++ LV++L LP T YGV++GT S+KG ICR V +++ +T+V+DF
Subjt: A--------ELALNSMVGLGSPKTLKVKGLIGSREVVVLIDSSATHNFIASPLVKELQLPTGQTEGYGVVLGTEGSSIKGTEICREVVLTLGPVTIVQDF
Query: LPLPLGSADMILSVQWLSTLGDVMTNHQSLLMTFMLGKSSVVLQGDPSLVRS-----------------------QGDITDSLSNGWEEVPECIRSVLVR
LPL LG+ D+IL + WL TLGDV N + L M +GK+ +VL+GDPSL R+ Q T LS +EVP+ ++ VL +
Subjt: LPLPLGSADMILSVQWLSTLGDVMTNHQSLLMTFMLGKSSVVLQGDPSLVRS-----------------------QGDITDSLSNGWEEVPECIRSVLVR
Query: HSSVFQPLPGLPPEHDGDHRIELLP
H +F P+ GLPP D DH I+L+P
Subjt: HSSVFQPLPGLPPEHDGDHRIELLP
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| RVX19673.1 Retrovirus-related Pol polyprotein from transposon opus [Vitis vinifera] | 2.7e-60 | 44.19 | Show/hide |
Query: PYKPLTETKYQNKRDRGLCFRCEVKFFPGHRCKKKELQVMIIHDREDEEAENGDEVAMQAVEMADNKNDEKPTEEEA--------ELALNSMVGLGSPKT
P K LTE++ Q +R +GLCF+CE KF P HRC KKEL+V+++H+ E+E+ DN+ D + T+E A +L+LNS+VGL +P T
Subjt: PYKPLTETKYQNKRDRGLCFRCEVKFFPGHRCKKKELQVMIIHDREDEEAENGDEVAMQAVEMADNKNDEKPTEEEA--------ELALNSMVGLGSPKT
Query: LKVKGLIGSREVVVLIDSSATHNFIASPLVKELQLPTGQTEGYGVVLGTEGSSIKGTEICREVVLTLGPVTIVQDFLPLPLGSADMILSVQWLSTLGDVM
+K+KG+IGS+EV++L+DS ATHNF++ LV++L LP T Y V++GT G S+KG ICR V +++ +T+V+DFLPL LG+ D+IL + WL TLGDV
Subjt: LKVKGLIGSREVVVLIDSSATHNFIASPLVKELQLPTGQTEGYGVVLGTEGSSIKGTEICREVVLTLGPVTIVQDFLPLPLGSADMILSVQWLSTLGDVM
Query: TNHQSLLMTFMLGKSSVVLQGDPSLVR---------------SQG--------DITDSLSNGWEEVPECIRSVLVRHSSVFQPLPGLPPEHDGDHRIELL
N + L M +GK+ +VL+GDPSL R SQG T LS G +EVP+ ++ VL +H +F+P+ GLPP D DH I+L+
Subjt: TNHQSLLMTFMLGKSSVVLQGDPSLVR---------------SQG--------DITDSLSNGWEEVPECIRSVLVRHSSVFQPLPGLPPEHDGDHRIELL
Query: P
P
Subjt: P
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A438F372 Retrovirus-related Pol polyprotein from transposon 297 | 1.4e-62 | 43.59 | Show/hide |
Query: GKSSEASSSSNPYKPLTETKYQNKRDRGLCFRCEVKFFPGHRCKKKELQVMIIHDREDEEAENGDEVAMQAVEMADNKNDEKPTEEEA--------ELAL
G+ + + P K LTE++ Q +R++GLCF+CE KF PGHRC KKEL+V+++H E+E+ DN+ D++ TEE A EL+L
Subjt: GKSSEASSSSNPYKPLTETKYQNKRDRGLCFRCEVKFFPGHRCKKKELQVMIIHDREDEEAENGDEVAMQAVEMADNKNDEKPTEEEA--------ELAL
Query: NSMVGLGSPKTLKVKGLIGSREVVVLIDSSATHNFIASPLVKELQLPTGQTEGYGVVLGTEGSSIKGTEICREVVLTLGPVTIVQDFLPLPLGSADMILS
NS+VGL +P T+K+KG IGS+EV++L+DS ATHNF++ LV++L LP T YGV++GT G S+KG ICR V +++ +T+V+DFLPL LG+ D+IL
Subjt: NSMVGLGSPKTLKVKGLIGSREVVVLIDSSATHNFIASPLVKELQLPTGQTEGYGVVLGTEGSSIKGTEICREVVLTLGPVTIVQDFLPLPLGSADMILS
Query: VQWLSTLGDVMTNHQSLLMTFMLGKSSVVLQGDPSLVRS-----------------------QGDITDSLSNGWEEVPECIRSVLVRHSSVFQPLPGLPP
+ WL TLGDV N + L M +GK+ +VL+GDPSL R+ Q T LS G +EVP+ ++ VL +H +F+P+ GLPP
Subjt: VQWLSTLGDVMTNHQSLLMTFMLGKSSVVLQGDPSLVRS-----------------------QGDITDSLSNGWEEVPECIRSVLVRHSSVFQPLPGLPP
Query: EHDGDHRIELLP
D DH I+L+P
Subjt: EHDGDHRIELLP
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| A0A438HNN1 Retrovirus-related Pol polyprotein from transposon 17.6 | 1.0e-60 | 44.78 | Show/hide |
Query: LTETKYQNKRDRGLCFRCEVKFFPGHRCKKKELQVMIIHDREDEEAENGDEVAMQAVEMADNKNDEKPTEEEA--------ELALNSMVGLGSPKTLKVK
LTE++ Q R++GLCF+CE KF PGHRC KKELQV+++H+ E+E+ DN+ D + TEE A EL+LNS+VGL + T+K+K
Subjt: LTETKYQNKRDRGLCFRCEVKFFPGHRCKKKELQVMIIHDREDEEAENGDEVAMQAVEMADNKNDEKPTEEEA--------ELALNSMVGLGSPKTLKVK
Query: GLIGSREVVVLIDSSATHNFIASPLVKELQLPTGQTEGYGVVLGTEGSSIKGTEICREVVLTLGPVTIVQDFLPLPLGSADMILSVQWLSTLGDVMTNHQ
G IGS+EV++L+DS ATHNF++ LV++L LP T YGV++GT G S+KG ICR V + + +T+V+DFLPL LG+ D+IL + WL TLGDV N +
Subjt: GLIGSREVVVLIDSSATHNFIASPLVKELQLPTGQTEGYGVVLGTEGSSIKGTEICREVVLTLGPVTIVQDFLPLPLGSADMILSVQWLSTLGDVMTNHQ
Query: SLLMTFMLGKSSVVLQGDPSLVRS-----------------------QGDITDSLSNGWEEVPECIRSVLVRHSSVFQPLPGLPPEHDGDHRIELLP
L M +GK+ +VL+GDPSL R+ Q T LS G +EVP+ ++ VL +H +F+P+ GLPP D DH I+L+P
Subjt: SLLMTFMLGKSSVVLQGDPSLVRS-----------------------QGDITDSLSNGWEEVPECIRSVLVRHSSVFQPLPGLPPEHDGDHRIELLP
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| A0A438K3V9 Retrovirus-related Pol polyprotein from transposon 297 | 1.9e-59 | 41.85 | Show/hide |
Query: KLGE--RLRKDTSGKSSEASSSSNPYKPLTETKYQNKRDRGLCFRCEVKFFPGHRCKKKELQVMIIHDREDEEAENGDEVAMQAVEMADNKNDEKPTEEE
K+GE + R G+ + + P K LTE++ Q +R++GLCF+CE KF PGHRC KK+L+V+++H+ ED++ DN+ D + TEE
Subjt: KLGE--RLRKDTSGKSSEASSSSNPYKPLTETKYQNKRDRGLCFRCEVKFFPGHRCKKKELQVMIIHDREDEEAENGDEVAMQAVEMADNKNDEKPTEEE
Query: A--------ELALNSMVGLGSPKTLKVKGLIGSREVVVLIDSSATHNFIASPLVKELQLPTGQTEGYGVVLGTEGSSIKGTEICREVVLTLGPVTIVQDF
A EL+LNS+VGL +P T+K+KG I S+EV++L+DS ATHNF++ LV++L LP T YGV++GT S+KG ICR V +++ +T+V+DF
Subjt: A--------ELALNSMVGLGSPKTLKVKGLIGSREVVVLIDSSATHNFIASPLVKELQLPTGQTEGYGVVLGTEGSSIKGTEICREVVLTLGPVTIVQDF
Query: LPLPLGSADMILSVQWLSTLGDVMTNHQSLLMTFMLGKSSVVLQGDPSLVRS-----------------------QGDITDSLSNGWEEVPECIRSVLVR
LPL LG+ D+IL + WL TLGDV N + L M +GK+ +VL+GDPSL R+ Q T LS +EVP+ ++ VL +
Subjt: LPLPLGSADMILSVQWLSTLGDVMTNHQSLLMTFMLGKSSVVLQGDPSLVRS-----------------------QGDITDSLSNGWEEVPECIRSVLVR
Query: HSSVFQPLPGLPPEHDGDHRIELLP
H +F P+ GLPP D DH I+L+P
Subjt: HSSVFQPLPGLPPEHDGDHRIELLP
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| A0A438KEN1 Retrovirus-related Pol polyprotein from transposon opus | 1.3e-60 | 44.19 | Show/hide |
Query: PYKPLTETKYQNKRDRGLCFRCEVKFFPGHRCKKKELQVMIIHDREDEEAENGDEVAMQAVEMADNKNDEKPTEEEA--------ELALNSMVGLGSPKT
P K LTE++ Q +R +GLCF+CE KF P HRC KKEL+V+++H+ E+E+ DN+ D + T+E A +L+LNS+VGL +P T
Subjt: PYKPLTETKYQNKRDRGLCFRCEVKFFPGHRCKKKELQVMIIHDREDEEAENGDEVAMQAVEMADNKNDEKPTEEEA--------ELALNSMVGLGSPKT
Query: LKVKGLIGSREVVVLIDSSATHNFIASPLVKELQLPTGQTEGYGVVLGTEGSSIKGTEICREVVLTLGPVTIVQDFLPLPLGSADMILSVQWLSTLGDVM
+K+KG+IGS+EV++L+DS ATHNF++ LV++L LP T Y V++GT G S+KG ICR V +++ +T+V+DFLPL LG+ D+IL + WL TLGDV
Subjt: LKVKGLIGSREVVVLIDSSATHNFIASPLVKELQLPTGQTEGYGVVLGTEGSSIKGTEICREVVLTLGPVTIVQDFLPLPLGSADMILSVQWLSTLGDVM
Query: TNHQSLLMTFMLGKSSVVLQGDPSLVR---------------SQG--------DITDSLSNGWEEVPECIRSVLVRHSSVFQPLPGLPPEHDGDHRIELL
N + L M +GK+ +VL+GDPSL R SQG T LS G +EVP+ ++ VL +H +F+P+ GLPP D DH I+L+
Subjt: TNHQSLLMTFMLGKSSVVLQGDPSLVR---------------SQG--------DITDSLSNGWEEVPECIRSVLVRHSSVFQPLPGLPPEHDGDHRIELL
Query: P
P
Subjt: P
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| A5B2I6 Reverse transcriptase domain-containing protein | 1.5e-64 | 45.51 | Show/hide |
Query: KLGE--RLRKDTSGKSSEASSSSNPYKPLTETKYQNKRDRGLCFRCEVKFFPGHRCKKKELQVMIIHDREDEEAENGDEVAMQAVEMADNKNDEKPTEEE
K+GE + R G+ + + P K LTE++ Q +R++GL F+CE KF PGHRC KKEL+V+++H+ E+E+ DN+ D++ TEE
Subjt: KLGE--RLRKDTSGKSSEASSSSNPYKPLTETKYQNKRDRGLCFRCEVKFFPGHRCKKKELQVMIIHDREDEEAENGDEVAMQAVEMADNKNDEKPTEEE
Query: A--------ELALNSMVGLGSPKTLKVKGLIGSREVVVLIDSSATHNFIASPLVKELQLPTGQTEGYGVVLGTEGSSIKGTEICREVVLTLGPVTIVQDF
A EL+LNS+VGL +P T+K+KG IGS+EV++L+DS ATHNF++ LV++L LP T YGV++GT G S+KG ICR V +++ +T+V+DF
Subjt: A--------ELALNSMVGLGSPKTLKVKGLIGSREVVVLIDSSATHNFIASPLVKELQLPTGQTEGYGVVLGTEGSSIKGTEICREVVLTLGPVTIVQDF
Query: LPLPLGSADMILSVQWLSTLGDVMTNHQSLLMTFMLGKSSVVLQGDPSLVRSQGDITDSLSNGWEEVPECIRSVLVRHSSVFQPLPGLPPEHDGDHRIEL
LPL LG+ D+IL + WL TLGDV N + L M +GK+ +VL+GDPSL R++ T LS G +EVP+ ++ VL +H +F+P+ GLPP D DH I+L
Subjt: LPLPLGSADMILSVQWLSTLGDVMTNHQSLLMTFMLGKSSVVLQGDPSLVRSQGDITDSLSNGWEEVPECIRSVLVRHSSVFQPLPGLPPEHDGDHRIEL
Query: L
+
Subjt: L
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