CuGenDBv2

Gene ID	Lag0029715
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Unknown protein
Genome location	chr8:41426168..41427489
RNA-Seq Expression	Lag0029715
Synteny	Lag0029715
Gene Ontology terms	GO:0009507 - chloroplast (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6578783.1 hypothetical protein SDJN03_23231, partial [Cucurbita argyrosperma subsp. sororia]

6.2e-53

80.3

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Query:  MSESPKVIGMNDDETPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDEGRKVGDDSQKPEFVRFPKAELAVSSVEAEVDVSGKTSNPAVIWQVYALGG
        MSE+PKVIGM +DE+PK PFTWFSFLPKFD RLPLPIN GKKPPA  +DE  K  D +QKPEFVRFPKA LAV SVE E DVSGKTSNPAVIWQVYALGG
Subjt:  MSESPKVIGMNDDETPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDEGRKVGDDSQKPEFVRFPKAELAVSSVEAEVDVSGKTSNPAVIWQVYALGG

Query:  FFILSWAWARWKERRPQRRPDDED--EDSRDT
        F ILSWAWARWKERRP+RR DD+D  EDSRDT
Subjt:  FFILSWAWARWKERRPQRRPDDED--EDSRDT

XP_022993210.1 uncharacterized protein LOC111489298 [Cucurbita maxima]

1.3e-53

80.3

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Query:  MSESPKVIGMNDDETPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDEGRKVGDDSQKPEFVRFPKAELAVSSVEAEVDVSGKTSNPAVIWQVYALGG
        MSESPKVIG+ ++E+PK PFTWFSFLPKFD RLPLPIN GKKPPA  +DEG K  +D+QKPEFVRFPKA LAV SVE E DVSGKTSNPAVIWQVYALGG
Subjt:  MSESPKVIGMNDDETPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDEGRKVGDDSQKPEFVRFPKAELAVSSVEAEVDVSGKTSNPAVIWQVYALGG

Query:  FFILSWAWARWKERRPQRRPDDED--EDSRDT
        F ILSWAWARWKERRP+RR DD+D  EDSRDT
Subjt:  FFILSWAWARWKERRPQRRPDDED--EDSRDT

XP_023550786.1 uncharacterized protein LOC111808822 isoform X1 [Cucurbita pepo subsp. pepo]

1.1e-54

81.82

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Query:  MSESPKVIGMNDDETPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDEGRKVGDDSQKPEFVRFPKAELAVSSVEAEVDVSGKTSNPAVIWQVYALGG
        MSE+PKVIGM +DE+PK PFTWFSFLPKFD RLPLPIN GKKPPA  +DEG K  DD+QKPEFVRFPKA LAV SVE E DVSGKTSNPAVIWQVYALGG
Subjt:  MSESPKVIGMNDDETPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDEGRKVGDDSQKPEFVRFPKAELAVSSVEAEVDVSGKTSNPAVIWQVYALGG

Query:  FFILSWAWARWKERRPQRRPDDED--EDSRDT
        F ILSWAWARWKERRP+RR DD+D  EDSRDT
Subjt:  FFILSWAWARWKERRPQRRPDDED--EDSRDT

XP_023550789.1 uncharacterized protein LOC111808822 isoform X3 [Cucurbita pepo subsp. pepo]

1.1e-54

81.82

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Query:  MSESPKVIGMNDDETPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDEGRKVGDDSQKPEFVRFPKAELAVSSVEAEVDVSGKTSNPAVIWQVYALGG
        MSE+PKVIGM +DE+PK PFTWFSFLPKFD RLPLPIN GKKPPA  +DEG K  DD+QKPEFVRFPKA LAV SVE E DVSGKTSNPAVIWQVYALGG
Subjt:  MSESPKVIGMNDDETPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDEGRKVGDDSQKPEFVRFPKAELAVSSVEAEVDVSGKTSNPAVIWQVYALGG

Query:  FFILSWAWARWKERRPQRRPDDED--EDSRDT
        F ILSWAWARWKERRP+RR DD+D  EDSRDT
Subjt:  FFILSWAWARWKERRPQRRPDDED--EDSRDT

XP_038886165.1 uncharacterized protein LOC120076415 [Benincasa hispida]

3.1e-52

80.62

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Query:  MSESPKVIGMNDDE-TPKS--PFTWFSFLPKFDFRLPLPINDGKKPPAAAVDEGRKVGDDSQKPEFVRFPKAELAVSSVEAEVDVSGKTSNPAVIWQVYA
        M+E+PK IGM +DE +PKS  PF WFSFLPKFDFRLP PIN GKKPPA  VDEGRK  DD+QKPEFVRFPKAEL V+SVEAE DVSGKTSNPAVIWQVYA
Subjt:  MSESPKVIGMNDDE-TPKS--PFTWFSFLPKFDFRLPLPINDGKKPPAAAVDEGRKVGDDSQKPEFVRFPKAELAVSSVEAEVDVSGKTSNPAVIWQVYA

Query:  LGGFFILSWAWARWKERRPQRRPDDEDED
        LGGF ILSWAWARWKERRPQRR +D++ED
Subjt:  LGGFFILSWAWARWKERRPQRRPDDEDED

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LSR5 Uncharacterized protein

8.2e-51

75.19

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Query:  MSESPKVIGMNDDE-TPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDEGRKVGDDSQKPEFVRFPKAELAVSSVEAEVDVSGKTSNPAVIWQVYALG
        M ++PK + + +DE  PKSPF WFSFLPKFDFRLP P+N GKKPP   VDE RK  +D+QKPEFVRFPKAEL V+SVEAE DVSGKTSNPAV+WQVYALG
Subjt:  MSESPKVIGMNDDE-TPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDEGRKVGDDSQKPEFVRFPKAELAVSSVEAEVDVSGKTSNPAVIWQVYALG

Query:  GFFILSWAWARWKERRPQRR--PDDEDEDSRDT
        GF ILSWAWARWKERRPQRR   DDEDEDS D+
Subjt:  GFFILSWAWARWKERRPQRR--PDDEDEDSRDT

A0A1S3C3J3 uncharacterized protein LOC103496485

1.5e-49

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Query:  MSESPKVIGMNDDE-TPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDEGRKVGDDSQKPEFVRFPKAELAVSSVEAEVDVSGKTSNPAVIWQVYALG
        M ++PK + M +DE  PKSPF WFSFLPKFDFRLP P+N GKK P   VDE RK  +D+QKPEFVRFPKAEL V+SVEAE DVSGKTSNPAV+WQVYALG
Subjt:  MSESPKVIGMNDDE-TPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDEGRKVGDDSQKPEFVRFPKAELAVSSVEAEVDVSGKTSNPAVIWQVYALG

Query:  GFFILSWAWARWKERRPQRRPDDEDE-DSRDT
        GF ILSWAWARWKERRPQRR +D+DE DS DT
Subjt:  GFFILSWAWARWKERRPQRRPDDEDE-DSRDT

A0A5D3CKR2 Uncharacterized protein

1.5e-49

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Query:  MSESPKVIGMNDDE-TPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDEGRKVGDDSQKPEFVRFPKAELAVSSVEAEVDVSGKTSNPAVIWQVYALG
        M ++PK + M +DE  PKSPF WFSFLPKFDFRLP P+N GKK P   VDE RK  +D+QKPEFVRFPKAEL V+SVEAE DVSGKTSNPAV+WQVYALG
Subjt:  MSESPKVIGMNDDE-TPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDEGRKVGDDSQKPEFVRFPKAELAVSSVEAEVDVSGKTSNPAVIWQVYALG

Query:  GFFILSWAWARWKERRPQRRPDDEDE-DSRDT
        GF ILSWAWARWKERRPQRR +D+DE DS DT
Subjt:  GFFILSWAWARWKERRPQRRPDDEDE-DSRDT

A0A6J1FFF8 uncharacterized protein LOC111444995

2.0e-52

79.55

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Query:  MSESPKVIGMNDDETPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDEGRKVGDDSQKPEFVRFPKAELAVSSVEAEVDVSGKTSNPAVIWQVYALGG
        MSE+PKVIGM +D +PK PFTWFSFLPKFD RLPLPIN GKKPPA  +DE  K  D +QKPEFVRFPKA LAV SVE E DVSGKTSNPAVIWQVYALGG
Subjt:  MSESPKVIGMNDDETPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDEGRKVGDDSQKPEFVRFPKAELAVSSVEAEVDVSGKTSNPAVIWQVYALGG

Query:  FFILSWAWARWKERRPQRRPDDED--EDSRDT
        F ILSWAWARWKERRP+RR DD+D  EDSRDT
Subjt:  FFILSWAWARWKERRPQRRPDDED--EDSRDT

A0A6J1JVP7 uncharacterized protein LOC111489298

6.1e-54

80.3

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Query:  MSESPKVIGMNDDETPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDEGRKVGDDSQKPEFVRFPKAELAVSSVEAEVDVSGKTSNPAVIWQVYALGG
        MSESPKVIG+ ++E+PK PFTWFSFLPKFD RLPLPIN GKKPPA  +DEG K  +D+QKPEFVRFPKA LAV SVE E DVSGKTSNPAVIWQVYALGG
Subjt:  MSESPKVIGMNDDETPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDEGRKVGDDSQKPEFVRFPKAELAVSSVEAEVDVSGKTSNPAVIWQVYALGG

Query:  FFILSWAWARWKERRPQRRPDDED--EDSRDT
        F ILSWAWARWKERRP+RR DD+D  EDSRDT
Subjt:  FFILSWAWARWKERRPQRRPDDED--EDSRDT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G52230.1 unknown protein

1.5e-12

33.11

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Query:  MSESPKVIGMNDDETPKSPFTWFSFLPK-FDFRLPLPINDGKKPPAAAVDEGRKVGDDSQKP-----EFVRFP-KAELAVSSVEAEVD-VSGKTSNPAVI
        M+E  +V   N  ++   P     F+   F F  P       KPP A +D         ++P     E V FP     +   ++ E +  SG+TSN  ++
Subjt:  MSESPKVIGMNDDETPKSPFTWFSFLPK-FDFRLPLPINDGKKPPAAAVDEGRKVGDDSQKP-----EFVRFP-KAELAVSSVEAEVD-VSGKTSNPAVI

Query:  WQVYALGGFFILSWAWARWKERRPQ-----------RRPDDEDEDSRD
        WQVYALGGF +L WAWARW ER  +           ++ DDED+ S D
Subjt:  WQVYALGGFFILSWAWARWKERRPQ-----------RRPDDEDEDSRD

Sequences

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CDS sequence

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ATGTCAGAGTCCCCAAAAGTTATTGGGATGAACGACGACGAGACCCCGAAATCCCCTTTCACTTGGTTCTCTTTCCTTCCCAAGTTCGACTTCCGATTGCCTCTTCCGAT
CAACGACGGCAAGAAACCGCCGGCTGCGGCGGTTGATGAAGGCCGGAAGGTTGGCGACGACTCGCAGAAGCCCGAGTTTGTCAGGTTTCCTAAAGCAGAGTTGGCCGTCT
CTTCGGTGGAGGCTGAAGTCGATGTCTCCGGCAAGACTTCCAATCCGGCGGTTATCTGGCAGGTATATGCTCTTGGAGGGTTTTTTATTTTGAGTTGGGCATGGGCAAGA
TGGAAGGAGAGAAGGCCCCAAAGACGTCCAGATGATGAGGATGAGGATTCCAGGGACACATAG

mRNA sequence

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Protein sequence

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MSESPKVIGMNDDETPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDEGRKVGDDSQKPEFVRFPKAELAVSSVEAEVDVSGKTSNPAVIWQVYALGGFFILSWAWAR
WKERRPQRRPDDEDEDSRDT

Lag0029715 (gene) of Sponge gourd (AG-4) v1 genome