; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0029733 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029733
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR1-like
Genome locationchr8:41667769..41668140
RNA-Seq ExpressionLag0029733
SyntenyLag0029733
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008456553.1 PREDICTED: cyclin-dependent protein kinase inhibitor SMR1-like [Cucumis melo]1.4e-4986.89Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPNPSNSDNIPSSAASDHDAS-SRGGCRTPTSAEHKIPKILSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEEVDN
        MSMDLEFPKNLPKIRLPLQVRSPP PS SDNI  S  SDHD+   R  CRTPTSAEHKIPKILSCPGAP+KPKRPPVPCKRKLTMELKFFEIVNQEEVDN
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPNPSNSDNIPSSAASDHDAS-SRGGCRTPTSAEHKIPKILSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEEVDN

Query:  FFRSAYDLEAASTAPPKRSCCR
        FFRSAYDLE++STAPPKR+CCR
Subjt:  FFRSAYDLEAASTAPPKRSCCR

XP_022923009.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita moschata]4.2e-5187.2Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPNPSNSDNIPSSAASDHDAS--SRGGCRTPTSAEHKIPKILSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEEVD
        MSMDLEFP+NLPKIRLPLQVRSPP PSNS NIPSS  SDHD +     GCRTPTSAEHKIPKI+SCPGAPRKPKRPPVPCKRKLTMELKFFE VNQEEVD
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPNPSNSDNIPSSAASDHDAS--SRGGCRTPTSAEHKIPKILSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEEVD

Query:  NFFRSAYDLEAASTAPPKRSCCRSA
        NFFRSAYDLEA+STAP KRSCCRSA
Subjt:  NFFRSAYDLEAASTAPPKRSCCRSA

XP_022990487.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita maxima]1.9e-5187.2Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPNPSNSDNIPSSAASDHDAS--SRGGCRTPTSAEHKIPKILSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEEVD
        MSMDLEFP+NLPKIRLPLQVRSPP PSNS NIPSS  SDHD +     GCRTPTSAEHKIPKI+SCPGAPRKPKRPPVPCKRKLTMELKFFE VNQEEVD
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPNPSNSDNIPSSAASDHDAS--SRGGCRTPTSAEHKIPKILSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEEVD

Query:  NFFRSAYDLEAASTAPPKRSCCRSA
        NFFRSAYDLEA+S APPKRSCCRSA
Subjt:  NFFRSAYDLEAASTAPPKRSCCRSA

XP_023521119.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita pepo subsp. pepo]5.0e-5288Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPNPSNSDNIPSSAASDHDAS--SRGGCRTPTSAEHKIPKILSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEEVD
        MSMDLEFP+NLPKIRLPLQVRSPP PSNS NIPSS  SDHD +     GCRTPTSAEHKIPKI+SCPGAPRKPKRPPVPCKRKLTMELKFFE VNQEEVD
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPNPSNSDNIPSSAASDHDAS--SRGGCRTPTSAEHKIPKILSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEEVD

Query:  NFFRSAYDLEAASTAPPKRSCCRSA
        NFFRSAYDLEA+STAPPKRSCCRSA
Subjt:  NFFRSAYDLEAASTAPPKRSCCRSA

XP_038884240.1 cyclin-dependent protein kinase inhibitor SMR1-like [Benincasa hispida]8.5e-5287.7Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPNPSNSDNIPSSAASDHDASSRGGCRTPTSAEHKIPKILSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEEVDNF
        MSMDLEFPKNLPKIRLPLQVRSPP PS SDNIPSSA+       R  CRTPTSAEHKIPKILSCPGAP+KPKRPPVPCKRKLTMELKFFEIVNQEEVDNF
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPNPSNSDNIPSSAASDHDASSRGGCRTPTSAEHKIPKILSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEEVDNF

Query:  FRSAYDLEAASTAPPKRSCCRS
        FRSAYDLEA+STAPPKR+CCRS
Subjt:  FRSAYDLEAASTAPPKRSCCRS

TrEMBL top hitse value%identityAlignment
A0A0A0LSQ6 Uncharacterized protein1.1e-4986.89Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPNPSNSDNIPSSAASDHDAS-SRGGCRTPTSAEHKIPKILSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEEVDN
        MSMDLEFPKNLPKIRLPLQVRSPP PS SDNI  S  SDHD+   R  CRTPTSAEHKIPKILSCPGAP+KPKRPPVPCKRKLTMELKFFEIVNQEEVDN
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPNPSNSDNIPSSAASDHDAS-SRGGCRTPTSAEHKIPKILSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEEVDN

Query:  FFRSAYDLEAASTAPPKRSCCR
        FFRSAYDLE++ TAPPKRSCCR
Subjt:  FFRSAYDLEAASTAPPKRSCCR

A0A1S3C3L4 cyclin-dependent protein kinase inhibitor SMR1-like6.6e-5086.89Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPNPSNSDNIPSSAASDHDAS-SRGGCRTPTSAEHKIPKILSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEEVDN
        MSMDLEFPKNLPKIRLPLQVRSPP PS SDNI  S  SDHD+   R  CRTPTSAEHKIPKILSCPGAP+KPKRPPVPCKRKLTMELKFFEIVNQEEVDN
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPNPSNSDNIPSSAASDHDAS-SRGGCRTPTSAEHKIPKILSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEEVDN

Query:  FFRSAYDLEAASTAPPKRSCCR
        FFRSAYDLE++STAPPKR+CCR
Subjt:  FFRSAYDLEAASTAPPKRSCCR

A0A5A7UMQ0 Cyclin-dependent protein kinase inhibitor SMR1-like6.6e-5086.89Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPNPSNSDNIPSSAASDHDAS-SRGGCRTPTSAEHKIPKILSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEEVDN
        MSMDLEFPKNLPKIRLPLQVRSPP PS SDNI  S  SDHD+   R  CRTPTSAEHKIPKILSCPGAP+KPKRPPVPCKRKLTMELKFFEIVNQEEVDN
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPNPSNSDNIPSSAASDHDAS-SRGGCRTPTSAEHKIPKILSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEEVDN

Query:  FFRSAYDLEAASTAPPKRSCCR
        FFRSAYDLE++STAPPKR+CCR
Subjt:  FFRSAYDLEAASTAPPKRSCCR

A0A6J1E540 cyclin-dependent protein kinase inhibitor SMR1-like2.0e-5187.2Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPNPSNSDNIPSSAASDHDAS--SRGGCRTPTSAEHKIPKILSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEEVD
        MSMDLEFP+NLPKIRLPLQVRSPP PSNS NIPSS  SDHD +     GCRTPTSAEHKIPKI+SCPGAPRKPKRPPVPCKRKLTMELKFFE VNQEEVD
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPNPSNSDNIPSSAASDHDAS--SRGGCRTPTSAEHKIPKILSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEEVD

Query:  NFFRSAYDLEAASTAPPKRSCCRSA
        NFFRSAYDLEA+STAP KRSCCRSA
Subjt:  NFFRSAYDLEAASTAPPKRSCCRSA

A0A6J1JIW3 cyclin-dependent protein kinase inhibitor SMR1-like9.2e-5287.2Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPNPSNSDNIPSSAASDHDAS--SRGGCRTPTSAEHKIPKILSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEEVD
        MSMDLEFP+NLPKIRLPLQVRSPP PSNS NIPSS  SDHD +     GCRTPTSAEHKIPKI+SCPGAPRKPKRPPVPCKRKLTMELKFFE VNQEEVD
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPNPSNSDNIPSSAASDHDAS--SRGGCRTPTSAEHKIPKILSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEEVD

Query:  NFFRSAYDLEAASTAPPKRSCCRSA
        NFFRSAYDLEA+S APPKRSCCRSA
Subjt:  NFFRSAYDLEAASTAPPKRSCCRSA

SwissProt top hitse value%identityAlignment
Q9AV28 Cyclin-dependent protein kinase inhibitor SMR19.0e-0440.68Show/hide
Query:  SSRGGCRTPTSAEHKIPKILSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFF
        SS G CRTPT  E  +    +CP APRKP+ P  PC+++L  E++   +   EE++  F
Subjt:  SSRGGCRTPTSAEHKIPKILSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFF

Q9LPP4 Cyclin-dependent protein kinase inhibitor SMR12.7e-0838.35Show/hide
Query:  MDLEFPKNLPKIRL--PLQVRSPPNPSNSDNIPSSAASDHDASSRGGCRTPTSAEHKIPKIL-SCPGAPRKPKRPPV-----------PCKRKL---TME
        MDLE  ++L K     P+++RS  + +  D        D +   R  C TPTS EHKIP ++ S P  PRKP+ PP             CKRKL   T E
Subjt:  MDLEFPKNLPKIRL--PLQVRSPPNPSNSDNIPSSAASDHDASSRGGCRTPTSAEHKIPKIL-SCPGAPRKPKRPPV-----------PCKRKL---TME

Query:  LKFFEIVNQEEVDNFFRSAYDLEAASTAPPKRS
        +    I+N+EE+D FF S Y+ E ++TA  +RS
Subjt:  LKFFEIVNQEEVDNFFRSAYDLEAASTAPPKRS

Q9LZ60 Cyclin-dependent protein kinase inhibitor SMR39.0e-0440.96Show/hide
Query:  QVRSPPNPSNSDNIPSSAASDHDASSRGGCRTPTSAEHKIP--KILSCPGAPRKPK-RPPVPCKRKLTMELKFFEIVNQEEVD
        ++R P  P    +IP S   D   +   GC+TPTS++HKIP  K   CP APRKPK       KRKLT       +VN+  +D
Subjt:  QVRSPPNPSNSDNIPSSAASDHDASSRGGCRTPTSAEHKIP--KILSCPGAPRKPK-RPPVPCKRKLTMELKFFEIVNQEEVD

Q9LZ78 Cyclin-dependent protein kinase inhibitor SIM4.2e-0935Show/hide
Query:  MDLEFPKNLPKIRLPLQVRSPPNPSNSDNIPSSAASDHDASSRGGCRTPTSAEHKIPKILSC--PGAPRKPKRPPVP-------CKRKLTMELKFFE-IV
        MDL+  ++LP +  P  ++   N +  D+              GGC TPTS++HKIP   +   P  P+KP+ P  P       CKRKL   L  +E IV
Subjt:  MDLEFPKNLPKIRLPLQVRSPPNPSNSDNIPSSAASDHDASSRGGCRTPTSAEHKIPKILSC--PGAPRKPKRPPVP-------CKRKLTMELKFFE-IV

Query:  NQEEVDNFFRSAYDLEAAST
        N++E++ FF S Y+   AS+
Subjt:  NQEEVDNFFRSAYDLEAAST

Arabidopsis top hitse value%identityAlignment
AT1G08180.1 unknown protein1.1e-0438.16Show/hide
Query:  SSAASDHDASSR-----GGCRTPTSAEHKIPKILSCPGAPRK-PKRPPVPCKRKLTMELKFFEI--VNQEEVDNFF
        S    DH  SS+         TPTS++HKIP++ +CP  PRK P+   +  K +L+ +L+FFE   V  +EV+  F
Subjt:  SSAASDHDASSR-----GGCRTPTSAEHKIPKILSCPGAPRK-PKRPPVPCKRKLTMELKFFEI--VNQEEVDNFF

AT3G10525.1 LOSS OF GIANT CELLS FROM ORGANS1.9e-0938.35Show/hide
Query:  MDLEFPKNLPKIRL--PLQVRSPPNPSNSDNIPSSAASDHDASSRGGCRTPTSAEHKIPKIL-SCPGAPRKPKRPPV-----------PCKRKL---TME
        MDLE  ++L K     P+++RS  + +  D        D +   R  C TPTS EHKIP ++ S P  PRKP+ PP             CKRKL   T E
Subjt:  MDLEFPKNLPKIRL--PLQVRSPPNPSNSDNIPSSAASDHDASSRGGCRTPTSAEHKIPKIL-SCPGAPRKPKRPPV-----------PCKRKL---TME

Query:  LKFFEIVNQEEVDNFFRSAYDLEAASTAPPKRS
        +    I+N+EE+D FF S Y+ E ++TA  +RS
Subjt:  LKFFEIVNQEEVDNFFRSAYDLEAASTAPPKRS

AT5G02420.1 unknown protein6.4e-0540.96Show/hide
Query:  QVRSPPNPSNSDNIPSSAASDHDASSRGGCRTPTSAEHKIP--KILSCPGAPRKPK-RPPVPCKRKLTMELKFFEIVNQEEVD
        ++R P  P    +IP S   D   +   GC+TPTS++HKIP  K   CP APRKPK       KRKLT       +VN+  +D
Subjt:  QVRSPPNPSNSDNIPSSAASDHDASSRGGCRTPTSAEHKIP--KILSCPGAPRKPK-RPPVPCKRKLTMELKFFEIVNQEEVD

AT5G04470.1 cyclin-dependent protein kinase inhibitors3.0e-1035Show/hide
Query:  MDLEFPKNLPKIRLPLQVRSPPNPSNSDNIPSSAASDHDASSRGGCRTPTSAEHKIPKILSC--PGAPRKPKRPPVP-------CKRKLTMELKFFE-IV
        MDL+  ++LP +  P  ++   N +  D+              GGC TPTS++HKIP   +   P  P+KP+ P  P       CKRKL   L  +E IV
Subjt:  MDLEFPKNLPKIRLPLQVRSPPNPSNSDNIPSSAASDHDASSRGGCRTPTSAEHKIPKILSC--PGAPRKPKRPPVP-------CKRKLTMELKFFE-IV

Query:  NQEEVDNFFRSAYDLEAAST
        N++E++ FF S Y+   AS+
Subjt:  NQEEVDNFFRSAYDLEAAST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATGGACCTTGAATTCCCCAAAAATCTCCCCAAAATCCGCCTTCCTTTACAGGTCCGATCGCCCCCCAACCCTTCCAATTCCGACAACATCCCTTCCTCCGCCGC
CTCCGATCACGACGCCTCCTCCCGCGGCGGCTGCCGGACCCCCACCTCCGCCGAGCATAAGATTCCCAAGATCCTCAGCTGCCCTGGAGCCCCGAGGAAGCCCAAGCGCC
CGCCCGTCCCTTGCAAGAGGAAGTTGACCATGGAGCTCAAATTCTTCGAGATCGTCAATCAAGAAGAGGTCGATAATTTCTTCCGATCCGCTTACGATCTCGAAGCTGCC
TCCACGGCGCCGCCCAAGCGGAGCTGCTGCCGGTCGGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCATGGACCTTGAATTCCCCAAAAATCTCCCCAAAATCCGCCTTCCTTTACAGGTCCGATCGCCCCCCAACCCTTCCAATTCCGACAACATCCCTTCCTCCGCCGC
CTCCGATCACGACGCCTCCTCCCGCGGCGGCTGCCGGACCCCCACCTCCGCCGAGCATAAGATTCCCAAGATCCTCAGCTGCCCTGGAGCCCCGAGGAAGCCCAAGCGCC
CGCCCGTCCCTTGCAAGAGGAAGTTGACCATGGAGCTCAAATTCTTCGAGATCGTCAATCAAGAAGAGGTCGATAATTTCTTCCGATCCGCTTACGATCTCGAAGCTGCC
TCCACGGCGCCGCCCAAGCGGAGCTGCTGCCGGTCGGCCTGA
Protein sequenceShow/hide protein sequence
MSMDLEFPKNLPKIRLPLQVRSPPNPSNSDNIPSSAASDHDASSRGGCRTPTSAEHKIPKILSCPGAPRKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLEAA
STAPPKRSCCRSA