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Lag0029758 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029758
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H protein
Genome locationchr8:41830829..41831203
RNA-Seq ExpressionLag0029758
SyntenyLag0029758
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4321705.1 unnamed protein product [Prunus armeniaca]2.6e-0836.36Show/hide
Query:  LTEKSSK---EELDLAIILIWAIWNARNRASSNNTRIEADHILAAVNLAWNEI-ENPNQKKGIEK----ARNQASHATWEKPPPNRWKLNADASWYASSE
        LT KSS+   E     +  +W IW ARN A     + +      AV+L  N++ E    K  ++     A N ++   W KPPP   K+N DA+W A + 
Subjt:  LTEKSSK---EELDLAIILIWAIWNARNRASSNNTRIEADHILAAVNLAWNEI-ENPNQKKGIEK----ARNQASHATWEKPPPNRWKLNADASWYASSE

Query:  RGGLGWTVRDSNGSLLCIGMQ
        RGG+GW +RD    LLC G Q
Subjt:  RGGLGWTVRDSNGSLLCIGMQ

XP_022143317.1 uncharacterized protein LOC111013216 [Momordica charantia]1.8e-0930.23Show/hide
Query:  DYWHWLTEKSSKEELDLAIILIWAIWNARNRASSNNTRIEADHILAAVNLAWN----------EIENPNQKKG-IEKARNQAS--HATWEKPPPNRWKLN
        D W+WL    S EE+  ++++ W IW +RNR+      I+   +  ++ L  N          +     Q  G + + R   +     W  PP N WKLN
Subjt:  DYWHWLTEKSSKEELDLAIILIWAIWNARNRASSNNTRIEADHILAAVNLAWN----------EIENPNQKKG-IEKARNQAS--HATWEKPPPNRWKLN

Query:  ADASWYASSERGGLGWTVRDSNGSLLCIG
         DASW    E GG+GW + D  G ++  G
Subjt:  ADASWYASSERGGLGWTVRDSNGSLLCIG

XP_022154990.1 uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]6.2e-1030.89Show/hide
Query:  DYWHWLTEKSSKEELDLAIILIWAIWNARNRASSNNTRIEADHILAA-----VNLAWNEIENPNQKKGIEKAR--NQASHATWEKPPPNRWKLNADASWY
        +YW WL +K+ +EE   ++I+   IW  RN++       E   I  A     +N A  +     + K     R     + A W+ P  N WKLN DA+W 
Subjt:  DYWHWLTEKSSKEELDLAIILIWAIWNARNRASSNNTRIEADHILAA-----VNLAWNEIENPNQKKGIEKAR--NQASHATWEKPPPNRWKLNADASWY

Query:  ASSERGGLGWTVRDSNGSLLCIG
        A +   G+GW +RD  G ++  G
Subjt:  ASSERGGLGWTVRDSNGSLLCIG

XP_022154991.1 uncharacterized protein LOC111022134 isoform X2 [Momordica charantia]6.2e-1030.89Show/hide
Query:  DYWHWLTEKSSKEELDLAIILIWAIWNARNRASSNNTRIEADHILAA-----VNLAWNEIENPNQKKGIEKAR--NQASHATWEKPPPNRWKLNADASWY
        +YW WL +K+ +EE   ++I+   IW  RN++       E   I  A     +N A  +     + K     R     + A W+ P  N WKLN DA+W 
Subjt:  DYWHWLTEKSSKEELDLAIILIWAIWNARNRASSNNTRIEADHILAA-----VNLAWNEIENPNQKKGIEKAR--NQASHATWEKPPPNRWKLNADASWY

Query:  ASSERGGLGWTVRDSNGSLLCIG
        A +   G+GW +RD  G ++  G
Subjt:  ASSERGGLGWTVRDSNGSLLCIG

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]1.2e-0829.31Show/hide
Query:  LTEKSSKEELDLAIILIWAIWNARNRASSNNTRIEADHILAAVNLAWNEIENPNQKKGIEKARNQASHATWEKPPPNRWKLNADASWYASSERGGLGWTV
        + +K+S E+LD+ +I  W IWN RN             ++  +     E    ++       +   +   WE PP + W LNADASW  S+ RGG+GW +
Subjt:  LTEKSSKEELDLAIILIWAIWNARNRASSNNTRIEADHILAAVNLAWNEIENPNQKKGIEKARNQASHATWEKPPPNRWKLNADASWYASSERGGLGWTV

Query:  RDSNGSLLCIGMQYTD
        R  +G ++  G ++ +
Subjt:  RDSNGSLLCIGMQYTD

TrEMBL top hitse value%identityAlignment
A0A6J1CQG0 uncharacterized protein LOC1110132168.8e-1030.23Show/hide
Query:  DYWHWLTEKSSKEELDLAIILIWAIWNARNRASSNNTRIEADHILAAVNLAWN----------EIENPNQKKG-IEKARNQAS--HATWEKPPPNRWKLN
        D W+WL    S EE+  ++++ W IW +RNR+      I+   +  ++ L  N          +     Q  G + + R   +     W  PP N WKLN
Subjt:  DYWHWLTEKSSKEELDLAIILIWAIWNARNRASSNNTRIEADHILAAVNLAWN----------EIENPNQKKG-IEKARNQAS--HATWEKPPPNRWKLN

Query:  ADASWYASSERGGLGWTVRDSNGSLLCIG
         DASW    E GG+GW + D  G ++  G
Subjt:  ADASWYASSERGGLGWTVRDSNGSLLCIG

A0A6J1DL64 uncharacterized protein LOC111022134 isoform X13.0e-1030.89Show/hide
Query:  DYWHWLTEKSSKEELDLAIILIWAIWNARNRASSNNTRIEADHILAA-----VNLAWNEIENPNQKKGIEKAR--NQASHATWEKPPPNRWKLNADASWY
        +YW WL +K+ +EE   ++I+   IW  RN++       E   I  A     +N A  +     + K     R     + A W+ P  N WKLN DA+W 
Subjt:  DYWHWLTEKSSKEELDLAIILIWAIWNARNRASSNNTRIEADHILAA-----VNLAWNEIENPNQKKGIEKAR--NQASHATWEKPPPNRWKLNADASWY

Query:  ASSERGGLGWTVRDSNGSLLCIG
        A +   G+GW +RD  G ++  G
Subjt:  ASSERGGLGWTVRDSNGSLLCIG

A0A6J1DNV9 uncharacterized protein LOC1110224035.7e-0929.31Show/hide
Query:  LTEKSSKEELDLAIILIWAIWNARNRASSNNTRIEADHILAAVNLAWNEIENPNQKKGIEKARNQASHATWEKPPPNRWKLNADASWYASSERGGLGWTV
        + +K+S E+LD+ +I  W IWN RN             ++  +     E    ++       +   +   WE PP + W LNADASW  S+ RGG+GW +
Subjt:  LTEKSSKEELDLAIILIWAIWNARNRASSNNTRIEADHILAAVNLAWNEIENPNQKKGIEKARNQASHATWEKPPPNRWKLNADASWYASSERGGLGWTV

Query:  RDSNGSLLCIGMQYTD
        R  +G ++  G ++ +
Subjt:  RDSNGSLLCIGMQYTD

A0A6J1DQC9 uncharacterized protein LOC111022134 isoform X23.0e-1030.89Show/hide
Query:  DYWHWLTEKSSKEELDLAIILIWAIWNARNRASSNNTRIEADHILAA-----VNLAWNEIENPNQKKGIEKAR--NQASHATWEKPPPNRWKLNADASWY
        +YW WL +K+ +EE   ++I+   IW  RN++       E   I  A     +N A  +     + K     R     + A W+ P  N WKLN DA+W 
Subjt:  DYWHWLTEKSSKEELDLAIILIWAIWNARNRASSNNTRIEADHILAA-----VNLAWNEIENPNQKKGIEKAR--NQASHATWEKPPPNRWKLNADASWY

Query:  ASSERGGLGWTVRDSNGSLLCIG
        A +   G+GW +RD  G ++  G
Subjt:  ASSERGGLGWTVRDSNGSLLCIG

A0A6P5S2T0 uncharacterized protein LOC1107519131.3e-0834.19Show/hide
Query:  TEKSSKEELDLAIILIWAIWNARNRA---SSNNTRIEADHIL----AAVNLAWNEIENPNQKKGIEKARNQASHATWEKPPPNRWKLNADASWYASSERG
        + + + E +   +  +W IW  RN A   S+    IEA H+L         A  E++ P   + I  +  Q    +W  PPP+  K+N D +W+A   RG
Subjt:  TEKSSKEELDLAIILIWAIWNARNRA---SSNNTRIEADHIL----AAVNLAWNEIENPNQKKGIEKARNQASHATWEKPPPNRWKLNADASWYASSERG

Query:  GLGWTVRDSNGSLLCIG
        G+GW +RDS+G LLC G
Subjt:  GLGWTVRDSNGSLLCIG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.0e-0628Show/hide
Query:  LIWAIWNARNRASSNNTRIEADHILAAVNLAWNE----IENPNQKKGIEKARNQASHATWEKPPPNRWKLNADASWYASSERGGLGWTVRDSNGSLLCIG
        L+W +W +RN         +A  +L      + E     E   +  G +  RN +    W+ PP    K N DA+W   + R G+GW +R+ +G +L +G
Subjt:  LIWAIWNARNRASSNNTRIEADHILAAVNLAWNE----IENPNQKKGIEKARNQASHATWEKPPPNRWKLNADASWYASSERGGLGWTVRDSNGSLLCIG

AT4G29090.1 Ribonuclease H-like superfamily protein7.3e-0930.48Show/hide
Query:  LIWAIWNARNRASSNNTRIEADHIL--AAVNLAWNEIENPNQKKGIEKARNQASHATWEKPPPNRW-KLNADASWYASSERGGLGWTVRDSNGSLLCIGM
        L+W +W  RN          A  +L  A  +L    I    +  G +   N++S   W +PPP++W K N DA+W   +ER G+GW +R+  G +  +G 
Subjt:  LIWAIWNARNRASSNNTRIEADHIL--AAVNLAWNEIENPNQKKGIEKARNQASHATWEKPPPNRW-KLNADASWYASSERGGLGWTVRDSNGSLLCIGM

Query:  QYTDK
        +   K
Subjt:  QYTDK

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.6e-0627.18Show/hide
Query:  LIWAIWNARNRASSNNTRIEADHILAAVNLAWNEIEN------PNQKKGIEKARNQASHATWEKPPPNRWKLNADASWYASSERGGLGWTVRDSNGSLLC
        L+W IW + N    N+TR +       V +A N+ +        N+++   +  + + +  W  P  ++ K N DAS +  +   GLGW +R+S G+++ 
Subjt:  LIWAIWNARNRASSNNTRIEADHILAAVNLAWNEIEN------PNQKKGIEKARNQASHATWEKPPPNRWKLNADASWYASSERGGLGWTVRDSNGSLLC

Query:  IGM
         GM
Subjt:  IGM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTATTGGCATTGGTTAACAGAAAAATCAAGCAAAGAGGAATTAGACTTGGCGATTATCCTAATTTGGGCTATTTGGAATGCAAGGAATAGAGCATCATCAAACAA
CACAAGAATTGAGGCAGATCATATCCTTGCAGCAGTCAATTTAGCGTGGAATGAGATAGAAAATCCTAACCAGAAAAAGGGGATCGAAAAGGCGAGGAACCAGGCGAGTC
ATGCCACTTGGGAAAAACCTCCCCCGAACAGATGGAAGCTGAATGCGGATGCTTCCTGGTACGCGAGCTCGGAGAGAGGCGGCTTAGGGTGGACGGTGCGTGACTCGAAC
GGGTCCTTGCTCTGCATCGGCATGCAATACACAGATAAACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACTATTGGCATTGGTTAACAGAAAAATCAAGCAAAGAGGAATTAGACTTGGCGATTATCCTAATTTGGGCTATTTGGAATGCAAGGAATAGAGCATCATCAAACAA
CACAAGAATTGAGGCAGATCATATCCTTGCAGCAGTCAATTTAGCGTGGAATGAGATAGAAAATCCTAACCAGAAAAAGGGGATCGAAAAGGCGAGGAACCAGGCGAGTC
ATGCCACTTGGGAAAAACCTCCCCCGAACAGATGGAAGCTGAATGCGGATGCTTCCTGGTACGCGAGCTCGGAGAGAGGCGGCTTAGGGTGGACGGTGCGTGACTCGAAC
GGGTCCTTGCTCTGCATCGGCATGCAATACACAGATAAACATTGA
Protein sequenceShow/hide protein sequence
MDYWHWLTEKSSKEELDLAIILIWAIWNARNRASSNNTRIEADHILAAVNLAWNEIENPNQKKGIEKARNQASHATWEKPPPNRWKLNADASWYASSERGGLGWTVRDSN
GSLLCIGMQYTDKH