; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0029763 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029763
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGlycine-rich RNA-binding family protein
Genome locationchr8:41869456..41870552
RNA-Seq ExpressionLag0029763
SyntenyLag0029763
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602289.1 Glycine-rich RNA-binding protein RZ1C, partial [Cucurbita argyrosperma subsp. sororia]1.1e-8971.48Show/hide
Query:  LEGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAEPGFRG----------------------EVIHLAVELVLVE
        +E +IMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDD EPGFRG                      E            
Subjt:  LEGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAEPGFRG----------------------EVIHLAVELVLVE

Query:  EVIDLWGKMNASR--------------------DRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGDRYDVNDRYPQNGY
        +     G     R                    DRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRF GGDRYDV+DRYPQNGY
Subjt:  EVIDLWGKMNASR--------------------DRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGDRYDVNDRYPQNGY

Query:  VKDRGGYDRDIGPRSGSDRYGS-GGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
        VKDRGGYDRDIGPRSGSDRYG+ GGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
Subjt:  VKDRGGYDRDIGPRSGSDRYGS-GGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY

XP_022961758.1 glycine-rich RNA-binding protein RZ1C-like [Cucurbita moschata]1.8e-8971.48Show/hide
Query:  LEGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAEPGFRG----------------------EVIHLAVELVLVE
        +E +IMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDD EPGFRG                      E            
Subjt:  LEGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAEPGFRG----------------------EVIHLAVELVLVE

Query:  EVIDLWGKMNASR--------------------DRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGDRYDVNDRYPQNGY
        +     G     R                    DRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRF GGDRYDV+DRYPQNGY
Subjt:  EVIDLWGKMNASR--------------------DRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGDRYDVNDRYPQNGY

Query:  VKDRGGYDRDIGPRSGSDRYGS-GGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
        VKDRGGYDRDIGPRSGSDRYG+ GGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
Subjt:  VKDRGGYDRDIGPRSGSDRYGS-GGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY

XP_022990423.1 glycine-rich RNA-binding protein RZ1C [Cucurbita maxima]2.4e-8971.09Show/hide
Query:  LEGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAEPGFRG----------------------EVIHLAVELVLVE
        +E +IMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDD EPGFRG                      E            
Subjt:  LEGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAEPGFRG----------------------EVIHLAVELVLVE

Query:  EVIDLWGKMNASR--------------------DRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGDRYDVNDRYPQNGY
        +     G     R                    DRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRF GGDRYDV+DRYPQNGY
Subjt:  EVIDLWGKMNASR--------------------DRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGDRYDVNDRYPQNGY

Query:  VKDRGGYDRDIGPRSGSDRYGS-GGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
        VKDRGGYDRDIGPRSGSDRYG+ GGPGRYEGR+YRDRPGPYDRPSRGGRPSSYERY
Subjt:  VKDRGGYDRDIGPRSGSDRYGS-GGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY

XP_023544240.1 glycine-rich RNA-binding protein RZ1C [Cucurbita pepo subsp. pepo]9.0e-8970.7Show/hide
Query:  LEGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAEPGFRG----------------------EVIHLAVELVLVE
        +E +IMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDD EPGFRG                      E            
Subjt:  LEGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAEPGFRG----------------------EVIHLAVELVLVE

Query:  EVIDLWGKMNASR--------------------DRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGDRYDVNDRYPQNGY
        +     G     R                    DRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYF+DRYPSAGDRF GGDRYDV+DRYPQNGY
Subjt:  EVIDLWGKMNASR--------------------DRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGDRYDVNDRYPQNGY

Query:  VKDRGGYDRDIGPRSGSDRYGS-GGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
        VK+RGGYDRDIGPRSGSDRYG+ GGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
Subjt:  VKDRGGYDRDIGPRSGSDRYGS-GGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY

XP_038885252.1 glycine-rich RNA-binding protein RZ1C isoform X1 [Benincasa hispida]1.9e-8370.08Show/hide
Query:  LEGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAEPGFR---------------------------GEVIHLAVE
        LE +IMLERDTGRPRGFGFITFADRRGMDDAIREMHG EFGERIISVNKAEPKMEGDDAEPGFR                           G   H A +
Subjt:  LEGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAEPGFR---------------------------GEVIHLAVE

Query:  LVLVEEVIDLWGKMNASR--------------DRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGDRYDVNDRYPQNGYV
           V           +SR              DRDRYVDDRY    +GGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRF GGDRYDV+DRYPQNGYV
Subjt:  LVLVEEVIDLWGKMNASR--------------DRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGDRYDVNDRYPQNGYV

Query:  KDRGGYDRDIGPRSGSDRYGSGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
        KDR GYDRDIGPRSGSDRYGSGGPGR+EGRSYRDR GPYDRPSRGGRPSSY+RY
Subjt:  KDRGGYDRDIGPRSGSDRYGSGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY

TrEMBL top hitse value%identityAlignment
A0A0A0LQB5 Uncharacterized protein3.4e-7866.27Show/hide
Query:  LEGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAEPGFRG----------------------EVIHLAVELVLVE
        LE +IMLERDTGRPRGFGFITFADRRGMDDAIREMHG E GERIISVNKAEPKMEGDD E GFRG                      E            
Subjt:  LEGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAEPGFRG----------------------EVIHLAVELVLVE

Query:  EVIDLWGKMNASR--------------------DRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGDRYDVNDRYPQNGY
        +   + G     R                    DRDRYVD+RY    +GGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRF G DRYDV+DRYPQNGY
Subjt:  EVIDLWGKMNASR--------------------DRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGDRYDVNDRYPQNGY

Query:  VKDRGGYDRDIGPRSGSDRYGSGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
        VKDR  YDRDIGPRSGSDRYGSGGPGR+EGRSYRDR GPYDRPSR GRPSSY+RY
Subjt:  VKDRGGYDRDIGPRSGSDRYGSGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY

A0A6J1BW59 glycine-rich RNA-binding protein RZ1C-like isoform X23.9e-8268.4Show/hide
Query:  MLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAEPGFRG----------------------EVIHLAVELVLVEEVIDL
        MLERDTGRPRGFGFITFADRRGMDDAIREMHG E GER ISVNKAEPKMEGDD EPGFRG                      E            +   +
Subjt:  MLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAEPGFRG----------------------EVIHLAVELVLVEEVIDL

Query:  WGKMNASR--------------------DRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGDRYDVNDRYPQNGYVKDRG
         G     R                    DRDRYVDDRY    DGGRYGDRD FDRRDDKYGSRDRYFDDRYPS GDRF GGDRYDV+DRYPQNGYVKDRG
Subjt:  WGKMNASR--------------------DRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGDRYDVNDRYPQNGYVKDRG

Query:  GYDRDIGPRSGSDRYGSGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
        GY+RDIGPRSGSDRYGSGGPGRYEGRSYRDR GPYDRPSRGGRPSSYERY
Subjt:  GYDRDIGPRSGSDRYGSGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY

A0A6J1BW89 glycine-rich RNA-binding protein RZ1C-like isoform X11.2e-8368.24Show/hide
Query:  LEGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAEPGFRG----------------------EVIHLAVELVLVE
        LE +IMLERDTGRPRGFGFITFADRRGMDDAIREMHG E GER ISVNKAEPKMEGDD EPGFRG                      E            
Subjt:  LEGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAEPGFRG----------------------EVIHLAVELVLVE

Query:  EVIDLWGKMNASR--------------------DRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGDRYDVNDRYPQNGY
        +   + G     R                    DRDRYVDDRY    DGGRYGDRD FDRRDDKYGSRDRYFDDRYPS GDRF GGDRYDV+DRYPQNGY
Subjt:  EVIDLWGKMNASR--------------------DRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGDRYDVNDRYPQNGY

Query:  VKDRGGYDRDIGPRSGSDRYGSGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
        VKDRGGY+RDIGPRSGSDRYGSGGPGRYEGRSYRDR GPYDRPSRGGRPSSYERY
Subjt:  VKDRGGYDRDIGPRSGSDRYGSGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY

A0A6J1HB93 glycine-rich RNA-binding protein RZ1C-like8.7e-9071.48Show/hide
Query:  LEGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAEPGFRG----------------------EVIHLAVELVLVE
        +E +IMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDD EPGFRG                      E            
Subjt:  LEGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAEPGFRG----------------------EVIHLAVELVLVE

Query:  EVIDLWGKMNASR--------------------DRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGDRYDVNDRYPQNGY
        +     G     R                    DRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRF GGDRYDV+DRYPQNGY
Subjt:  EVIDLWGKMNASR--------------------DRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGDRYDVNDRYPQNGY

Query:  VKDRGGYDRDIGPRSGSDRYGS-GGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
        VKDRGGYDRDIGPRSGSDRYG+ GGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
Subjt:  VKDRGGYDRDIGPRSGSDRYGS-GGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY

A0A6J1JS04 glycine-rich RNA-binding protein RZ1C1.1e-8971.09Show/hide
Query:  LEGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAEPGFRG----------------------EVIHLAVELVLVE
        +E +IMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDD EPGFRG                      E            
Subjt:  LEGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAEPGFRG----------------------EVIHLAVELVLVE

Query:  EVIDLWGKMNASR--------------------DRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGDRYDVNDRYPQNGY
        +     G     R                    DRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRF GGDRYDV+DRYPQNGY
Subjt:  EVIDLWGKMNASR--------------------DRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGDRYDVNDRYPQNGY

Query:  VKDRGGYDRDIGPRSGSDRYGS-GGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
        VKDRGGYDRDIGPRSGSDRYG+ GGPGRYEGR+YRDRPGPYDRPSRGGRPSSYERY
Subjt:  VKDRGGYDRDIGPRSGSDRYGS-GGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY

SwissProt top hitse value%identityAlignment
O22703 Glycine-rich RNA-binding protein RZ1B1.3e-4246.3Show/hide
Query:  EGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAE--------------------------------PGFRGEVIH
        E +IM+ RDTGRPRGFGFITF DRRG DDAI+ MHG E G ++ISVNKAEPK+ G+D +                                P    +   
Subjt:  EGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAE--------------------------------PGFRGEVIH

Query:  LAVELVLVEEVIDL------WGKMNASRDR------DRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGDRYDVNDRYPQNG
          V L +   + D+      +G  +  R+R      DRY+D R D  RDGGRY  RDRFD   DKY  RD Y  +RY   GDRF   DRY + + + +N 
Subjt:  LAVELVLVEEVIDL------WGKMNASRDR------DRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGDRYDVNDRYPQNG

Query:  YVKDRGGYDRDIGPRSGSDRYGSGGPGRYEGRSYRDRPGPYDRPSR-GGRPSSYERY
        Y      YDRD   R  SDRYG  GP R EGR YR RPGPYDRPSR GGRPSSYER+
Subjt:  YVKDRGGYDRDIGPRSGSDRYGSGGPGRYEGRSYRDRPGPYDRPSR-GGRPSSYERY

Q03251 Glycine-rich RNA-binding protein 85.8e-0631.89Show/hide
Query:  LEGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAEPGFRGEVIHLAVELVLVEEVIDLWGKMNASRDRDRYVDDR
        ++ KI+ +R++GR RGFGF+TF D + M DAI EM+G E   R+I+VN+A+ +  G     G RG                   G     R         
Subjt:  LEGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAEPGFRGEVIHLAVELVLVEEVIDLWGKMNASRDRDRYVDDR

Query:  YDGGRDGG-RYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGDRYDVNDRYPQNGYVKDRGGYDRDIGPRSGSDRYGSGGPG
        Y GG  GG   G    ++RR   YGS            G  +GGG R             ++ GGY    G   GS  YG GG G
Subjt:  YDGGRDGG-RYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGDRYDVNDRYPQNGYVKDRGGYDRDIGPRSGSDRYGSGGPG

Q05966 Glycine-rich RNA-binding protein 102.3e-0732.11Show/hide
Query:  LEGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAEPGFRGEVIHLAVELVLVEEVIDLWGKMNASRDRDRYVDDR
        ++ KI+ +R+TGR RGFGF+TF D + M DAI EM+G E   R I+VN+A+ +  G                                            
Subjt:  LEGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAEPGFRGEVIHLAVELVLVEEVIDLWGKMNASRDRDRYVDDR

Query:  YDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGDRYDVNDRYPQNGYVKDRGGYDRDIGPRSGSDRYGSGGPGRYEGRS
          GGR GG YG R         YG     + DR    G   GGG R          GY    GGY    G R G   YG GG G Y G S
Subjt:  YDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGDRYDVNDRYPQNGYVKDRGGYDRDIGPRSGSDRYGSGGPGRYEGRS

Q8RWN5 Glycine-rich RNA-binding protein RZ1C1.9e-4144.32Show/hide
Query:  LEGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAEP-GFR---------------------------------GE
        L+ +IMLERDTGR RGFGFITFADRR MD++IREMHG +FG+R+ISVN+AEPK+  DD E  G R                                 G 
Subjt:  LEGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAEP-GFR---------------------------------GE

Query:  VIHLAVELVLV---------------------EEVIDLWGKMNASRDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGD
        V H A +                         +  +D +   +   DR+RY+DDRYDG     RYG RDRFD R + Y  RDRY  DRY +  DRF GGD
Subjt:  VIHLAVELVLV---------------------EEVIDLWGKMNASRDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGD

Query:  RYD-VNDRYPQNGYVKDRGGYDRDIGPRSGSDRYG---SGGP---GRYEGRSYRDRPG-PYDRPSRGGRPSSY
        RY   +DRYP   Y K R  ++RDI P +GSDRYG   +GGP   G  EGR +R R G PY+RPSR G   +Y
Subjt:  RYD-VNDRYPQNGYVKDRGGYDRDIGPRSGSDRYG---SGGP---GRYEGRSYRDRPG-PYDRPSRGGRPSSY

Q9LIN3 Glycine-rich RNA-binding protein RZ1A7.5e-1433.9Show/hide
Query:  LEGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAE-PGFRGEVIHLAVELVLVEEVIDLWGKMNASRDRDRYVDD
        +E K++L++ +GR RGFGFITF +++ MD+AI  M+G +   R I+V+KA+P   G   +  G RG                         RDR R    
Subjt:  LEGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAE-PGFRGEVIHLAVELVLVEEVIDLWGKMNASRDRDRYVDD

Query:  RYDG-------------------GRD-GGRYGDR-DRFDRRDDKYGSRDRYFDDRYPSAGDRFGG-GDRY-DVNDRYPQNGYVKDRGGYDRDIGPRSGSD
        R  G                    RD GGR+  + DR+  +DD+YG++    DDRY +  DR+G   DRY   +DRY       DR G     G R G D
Subjt:  RYDG-------------------GRD-GGRYGDR-DRFDRRDDKYGSRDRYFDDRYPSAGDRFGG-GDRY-DVNDRYPQNGYVKDRGGYDRDIGPRSGSD

Query:  RYGSGGPGRYEGRSYRDRPG-------PYDRPSRGG
        R G    GR      R  PG       PYDRP  GG
Subjt:  RYGSGGPGRYEGRSYRDRPG-------PYDRPSRGG

Arabidopsis top hitse value%identityAlignment
AT1G60650.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain9.4e-4446.3Show/hide
Query:  EGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAE--------------------------------PGFRGEVIH
        E +IM+ RDTGRPRGFGFITF DRRG DDAI+ MHG E G ++ISVNKAEPK+ G+D +                                P    +   
Subjt:  EGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAE--------------------------------PGFRGEVIH

Query:  LAVELVLVEEVIDL------WGKMNASRDR------DRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGDRYDVNDRYPQNG
          V L +   + D+      +G  +  R+R      DRY+D R D  RDGGRY  RDRFD   DKY  RD Y  +RY   GDRF   DRY + + + +N 
Subjt:  LAVELVLVEEVIDL------WGKMNASRDR------DRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGDRYDVNDRYPQNG

Query:  YVKDRGGYDRDIGPRSGSDRYGSGGPGRYEGRSYRDRPGPYDRPSR-GGRPSSYERY
        Y      YDRD   R  SDRYG  GP R EGR YR RPGPYDRPSR GGRPSSYER+
Subjt:  YVKDRGGYDRDIGPRSGSDRYGSGGPGRYEGRSYRDRPGPYDRPSR-GGRPSSYERY

AT1G60650.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain9.4e-4446.3Show/hide
Query:  EGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAE--------------------------------PGFRGEVIH
        E +IM+ RDTGRPRGFGFITF DRRG DDAI+ MHG E G ++ISVNKAEPK+ G+D +                                P    +   
Subjt:  EGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAE--------------------------------PGFRGEVIH

Query:  LAVELVLVEEVIDL------WGKMNASRDR------DRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGDRYDVNDRYPQNG
          V L +   + D+      +G  +  R+R      DRY+D R D  RDGGRY  RDRFD   DKY  RD Y  +RY   GDRF   DRY + + + +N 
Subjt:  LAVELVLVEEVIDL------WGKMNASRDR------DRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGDRYDVNDRYPQNG

Query:  YVKDRGGYDRDIGPRSGSDRYGSGGPGRYEGRSYRDRPGPYDRPSR-GGRPSSYERY
        Y      YDRD   R  SDRYG  GP R EGR YR RPGPYDRPSR GGRPSSYER+
Subjt:  YVKDRGGYDRDIGPRSGSDRYGSGGPGRYEGRSYRDRPGPYDRPSR-GGRPSSYERY

AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain5.4e-1533.9Show/hide
Query:  LEGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAE-PGFRGEVIHLAVELVLVEEVIDLWGKMNASRDRDRYVDD
        +E K++L++ +GR RGFGFITF +++ MD+AI  M+G +   R I+V+KA+P   G   +  G RG                         RDR R    
Subjt:  LEGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAE-PGFRGEVIHLAVELVLVEEVIDLWGKMNASRDRDRYVDD

Query:  RYDG-------------------GRD-GGRYGDR-DRFDRRDDKYGSRDRYFDDRYPSAGDRFGG-GDRY-DVNDRYPQNGYVKDRGGYDRDIGPRSGSD
        R  G                    RD GGR+  + DR+  +DD+YG++    DDRY +  DR+G   DRY   +DRY       DR G     G R G D
Subjt:  RYDG-------------------GRD-GGRYGDR-DRFDRRDDKYGSRDRYFDDRYPSAGDRFGG-GDRY-DVNDRYPQNGYVKDRGGYDRDIGPRSGSD

Query:  RYGSGGPGRYEGRSYRDRPG-------PYDRPSRGG
        R G    GR      R  PG       PYDRP  GG
Subjt:  RYGSGGPGRYEGRSYRDRPG-------PYDRPSRGG

AT4G39260.1 cold, circadian rhythm, and RNA binding 14.1e-0731.89Show/hide
Query:  LEGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAEPGFRGEVIHLAVELVLVEEVIDLWGKMNASRDRDRYVDDR
        ++ KI+ +R++GR RGFGF+TF D + M DAI EM+G E   R+I+VN+A+ +  G     G RG                   G     R         
Subjt:  LEGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAEPGFRGEVIHLAVELVLVEEVIDLWGKMNASRDRDRYVDDR

Query:  YDGGRDGG-RYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGDRYDVNDRYPQNGYVKDRGGYDRDIGPRSGSDRYGSGGPG
        Y GG  GG   G    ++RR   YGS            G  +GGG R             ++ GGY    G   GS  YG GG G
Subjt:  YDGGRDGG-RYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGDRYDVNDRYPQNGYVKDRGGYDRDIGPRSGSDRYGSGGPG

AT5G04280.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain1.4e-4244.32Show/hide
Query:  LEGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAEP-GFR---------------------------------GE
        L+ +IMLERDTGR RGFGFITFADRR MD++IREMHG +FG+R+ISVN+AEPK+  DD E  G R                                 G 
Subjt:  LEGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAEP-GFR---------------------------------GE

Query:  VIHLAVELVLV---------------------EEVIDLWGKMNASRDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGD
        V H A +                         +  +D +   +   DR+RY+DDRYDG     RYG RDRFD R + Y  RDRY  DRY +  DRF GGD
Subjt:  VIHLAVELVLV---------------------EEVIDLWGKMNASRDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGD

Query:  RYD-VNDRYPQNGYVKDRGGYDRDIGPRSGSDRYG---SGGP---GRYEGRSYRDRPG-PYDRPSRGGRPSSY
        RY   +DRYP   Y K R  ++RDI P +GSDRYG   +GGP   G  EGR +R R G PY+RPSR G   +Y
Subjt:  RYD-VNDRYPQNGYVKDRGGYDRDIGPRSGSDRYG---SGGP---GRYEGRSYRDRPG-PYDRPSRGGRPSSY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTGCTTGGAAGGGAAAATCATGTTAGAGCGAGATACAGGTCGTCCTCGTGGGTTTGGTTTTATTACCTTTGCAGACCGTCGAGGGATGGATGATGCGATCAGAGA
GATGCATGGGCATGAGTTTGGTGAGCGTATTATCTCAGTAAATAAGGCTGAACCCAAGATGGAGGGAGATGATGCAGAGCCAGGCTTCAGGGGGGAGGTTATTCATCTGG
CGGTAGAGCTAGTTTTGGTAGAGGAGGTGATAGATCTGTGGGGCAAGATGAATGCTTCAAGAGATCGTGACAGATATGTGGATGACCGTTATGATGGAGGACGAGATGGA
GGGCGATATGGTGATAGAGATCGTTTTGATCGTAGAGATGACAAGTACGGAAGTCGAGACCGGTATTTTGATGACAGGTACCCATCTGCTGGAGATCGTTTTGGAGGTGG
TGATAGGTACGATGTTAATGATCGTTATCCTCAAAATGGCTATGTGAAAGACAGAGGTGGCTATGATAGGGATATTGGTCCTAGGAGTGGCAGTGATAGGTATGGTAGCG
GAGGTCCTGGCCGTTACGAGGGAAGAAGTTATAGAGATAGGCCAGGCCCTTACGACCGTCCAAGCAGGGGAGGACGACCGTCTTCCTACGAGCGCTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTTGCTTGGAAGGGAAAATCATGTTAGAGCGAGATACAGGTCGTCCTCGTGGGTTTGGTTTTATTACCTTTGCAGACCGTCGAGGGATGGATGATGCGATCAGAGA
GATGCATGGGCATGAGTTTGGTGAGCGTATTATCTCAGTAAATAAGGCTGAACCCAAGATGGAGGGAGATGATGCAGAGCCAGGCTTCAGGGGGGAGGTTATTCATCTGG
CGGTAGAGCTAGTTTTGGTAGAGGAGGTGATAGATCTGTGGGGCAAGATGAATGCTTCAAGAGATCGTGACAGATATGTGGATGACCGTTATGATGGAGGACGAGATGGA
GGGCGATATGGTGATAGAGATCGTTTTGATCGTAGAGATGACAAGTACGGAAGTCGAGACCGGTATTTTGATGACAGGTACCCATCTGCTGGAGATCGTTTTGGAGGTGG
TGATAGGTACGATGTTAATGATCGTTATCCTCAAAATGGCTATGTGAAAGACAGAGGTGGCTATGATAGGGATATTGGTCCTAGGAGTGGCAGTGATAGGTATGGTAGCG
GAGGTCCTGGCCGTTACGAGGGAAGAAGTTATAGAGATAGGCCAGGCCCTTACGACCGTCCAAGCAGGGGAGGACGACCGTCTTCCTACGAGCGCTACTAA
Protein sequenceShow/hide protein sequence
MICLEGKIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDAEPGFRGEVIHLAVELVLVEEVIDLWGKMNASRDRDRYVDDRYDGGRDG
GRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFGGGDRYDVNDRYPQNGYVKDRGGYDRDIGPRSGSDRYGSGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY