CuGenDBv2

Gene ID	Lag0029828
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	DNA replication ATP-dependent helicase/nuclease DNA2
Genome location	chr8:42456083..42457809
RNA-Seq Expression	Lag0029828
Synteny	Lag0029828
Gene Ontology terms	GO:0071932 - replication fork reversal (biological process) GO:0005737 - cytoplasm (cellular component) GO:0003723 - RNA binding (molecular function) GO:0017108 - 5'-flap endonuclease activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7018906.1 DNA replication ATP-dependent helicase/nuclease DNA2, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.9e-06

43.61

Show/hide

Query:  EEETTNDEITLKISPV----KTVSKQLSETIRVLANSSRLSSLRMRIRQCSPNKGLQKVLNQMTTFRKAESRLYSLPHTEQRSKLH-EPSESRILQQHQS
        +E TTNDEIT KISPV    + VSKQL ETIRVLANSSRL+SL  RIRQCS NK                +    L + EQ S L+ +PSE  +   H++
Subjt:  EEETTNDEITLKISPV----KTVSKQLSETIRVLANSSRLSSLRMRIRQCSPNKGLQKVLNQMTTFRKAESRLYSLPHTEQRSKLH-EPSESRILQQHQS

Query:  PMKRMYRQQGNEADAVREKIAGRSGKGVDHLQN
         +KR+  +   E + V   I   SG  V + Q+
Subjt:  PMKRMYRQQGNEADAVREKIAGRSGKGVDHLQN

XP_022924798.1 DNA replication ATP-dependent helicase/nuclease DNA2 isoform X1 [Cucurbita moschata]

2.9e-06

43.61

Show/hide

Query:  EEETTNDEITLKISPV----KTVSKQLSETIRVLANSSRLSSLRMRIRQCSPNKGLQKVLNQMTTFRKAESRLYSLPHTEQRSKLH-EPSESRILQQHQS
        +E TTNDEIT KISPV    + VSKQL ETIRVLANSSRL+SL  RIRQCS NK                +    L + EQ S L+ +PSE  +   H++
Subjt:  EEETTNDEITLKISPV----KTVSKQLSETIRVLANSSRLSSLRMRIRQCSPNKGLQKVLNQMTTFRKAESRLYSLPHTEQRSKLH-EPSESRILQQHQS

Query:  PMKRMYRQQGNEADAVREKIAGRSGKGVDHLQN
         +KR+  +   E + V   I   SG  V + Q+
Subjt:  PMKRMYRQQGNEADAVREKIAGRSGKGVDHLQN

XP_022924804.1 DNA replication ATP-dependent helicase/nuclease DNA2 isoform X3 [Cucurbita moschata]

2.9e-06

43.61

Show/hide

Query:  EEETTNDEITLKISPV----KTVSKQLSETIRVLANSSRLSSLRMRIRQCSPNKGLQKVLNQMTTFRKAESRLYSLPHTEQRSKLH-EPSESRILQQHQS
        +E TTNDEIT KISPV    + VSKQL ETIRVLANSSRL+SL  RIRQCS NK                +    L + EQ S L+ +PSE  +   H++
Subjt:  EEETTNDEITLKISPV----KTVSKQLSETIRVLANSSRLSSLRMRIRQCSPNKGLQKVLNQMTTFRKAESRLYSLPHTEQRSKLH-EPSESRILQQHQS

Query:  PMKRMYRQQGNEADAVREKIAGRSGKGVDHLQN
         +KR+  +   E + V   I   SG  V + Q+
Subjt:  PMKRMYRQQGNEADAVREKIAGRSGKGVDHLQN

XP_022924805.1 DNA replication ATP-dependent helicase/nuclease DNA2 isoform X4 [Cucurbita moschata]

2.9e-06

43.61

Show/hide

Query:  EEETTNDEITLKISPV----KTVSKQLSETIRVLANSSRLSSLRMRIRQCSPNKGLQKVLNQMTTFRKAESRLYSLPHTEQRSKLH-EPSESRILQQHQS
        +E TTNDEIT KISPV    + VSKQL ETIRVLANSSRL+SL  RIRQCS NK                +    L + EQ S L+ +PSE  +   H++
Subjt:  EEETTNDEITLKISPV----KTVSKQLSETIRVLANSSRLSSLRMRIRQCSPNKGLQKVLNQMTTFRKAESRLYSLPHTEQRSKLH-EPSESRILQQHQS

Query:  PMKRMYRQQGNEADAVREKIAGRSGKGVDHLQN
         +KR+  +   E + V   I   SG  V + Q+
Subjt:  PMKRMYRQQGNEADAVREKIAGRSGKGVDHLQN

XP_022980183.1 DNA replication ATP-dependent helicase/nuclease DNA2 isoform X1 [Cucurbita maxima]

2.9e-06

43.61

Show/hide

Query:  EEETTNDEITLKISPV----KTVSKQLSETIRVLANSSRLSSLRMRIRQCSPNKGLQKVLNQMTTFRKAESRLYSLPHTEQRSKLH-EPSESRILQQHQS
        +E TTNDEIT KISPV    + VSKQL ETIRVLANSSRL+SL  RIRQCS NK                +    L + EQ S L+ +PSE  +   H++
Subjt:  EEETTNDEITLKISPV----KTVSKQLSETIRVLANSSRLSSLRMRIRQCSPNKGLQKVLNQMTTFRKAESRLYSLPHTEQRSKLH-EPSESRILQQHQS

Query:  PMKRMYRQQGNEADAVREKIAGRSGKGVDHLQN
         +KR+  +   E + V   I   SG  V + Q+
Subjt:  PMKRMYRQQGNEADAVREKIAGRSGKGVDHLQN

TrEMBL top hits

e value

%identity

Alignment

A0A6J1EDH9 DNA replication ATP-dependent helicase/nuclease DNA2 isoform X1

1.4e-06

43.61

Show/hide

Query:  EEETTNDEITLKISPV----KTVSKQLSETIRVLANSSRLSSLRMRIRQCSPNKGLQKVLNQMTTFRKAESRLYSLPHTEQRSKLH-EPSESRILQQHQS
        +E TTNDEIT KISPV    + VSKQL ETIRVLANSSRL+SL  RIRQCS NK                +    L + EQ S L+ +PSE  +   H++
Subjt:  EEETTNDEITLKISPV----KTVSKQLSETIRVLANSSRLSSLRMRIRQCSPNKGLQKVLNQMTTFRKAESRLYSLPHTEQRSKLH-EPSESRILQQHQS

Query:  PMKRMYRQQGNEADAVREKIAGRSGKGVDHLQN
         +KR+  +   E + V   I   SG  V + Q+
Subjt:  PMKRMYRQQGNEADAVREKIAGRSGKGVDHLQN

A0A6J1IQQ2 DNA replication ATP-dependent helicase/nuclease DNA2 isoform X2

1.4e-06

43.61

Show/hide

Query:  EEETTNDEITLKISPV----KTVSKQLSETIRVLANSSRLSSLRMRIRQCSPNKGLQKVLNQMTTFRKAESRLYSLPHTEQRSKLH-EPSESRILQQHQS
        +E TTNDEIT KISPV    + VSKQL ETIRVLANSSRL+SL  RIRQCS NK                +    L + EQ S L+ +PSE  +   H++
Subjt:  EEETTNDEITLKISPV----KTVSKQLSETIRVLANSSRLSSLRMRIRQCSPNKGLQKVLNQMTTFRKAESRLYSLPHTEQRSKLH-EPSESRILQQHQS

Query:  PMKRMYRQQGNEADAVREKIAGRSGKGVDHLQN
         +KR+  +   E + V   I   SG  V + Q+
Subjt:  PMKRMYRQQGNEADAVREKIAGRSGKGVDHLQN

A0A6J1ISY1 DNA replication ATP-dependent helicase/nuclease DNA2 isoform X1

1.4e-06

43.61

Show/hide

Query:  EEETTNDEITLKISPV----KTVSKQLSETIRVLANSSRLSSLRMRIRQCSPNKGLQKVLNQMTTFRKAESRLYSLPHTEQRSKLH-EPSESRILQQHQS
        +E TTNDEIT KISPV    + VSKQL ETIRVLANSSRL+SL  RIRQCS NK                +    L + EQ S L+ +PSE  +   H++
Subjt:  EEETTNDEITLKISPV----KTVSKQLSETIRVLANSSRLSSLRMRIRQCSPNKGLQKVLNQMTTFRKAESRLYSLPHTEQRSKLH-EPSESRILQQHQS

Query:  PMKRMYRQQGNEADAVREKIAGRSGKGVDHLQN
         +KR+  +   E + V   I   SG  V + Q+
Subjt:  PMKRMYRQQGNEADAVREKIAGRSGKGVDHLQN

A0A6J1IYJ9 DNA replication ATP-dependent helicase/nuclease DNA2 isoform X3

1.4e-06

43.61

Show/hide

Query:  EEETTNDEITLKISPV----KTVSKQLSETIRVLANSSRLSSLRMRIRQCSPNKGLQKVLNQMTTFRKAESRLYSLPHTEQRSKLH-EPSESRILQQHQS
        +E TTNDEIT KISPV    + VSKQL ETIRVLANSSRL+SL  RIRQCS NK                +    L + EQ S L+ +PSE  +   H++
Subjt:  EEETTNDEITLKISPV----KTVSKQLSETIRVLANSSRLSSLRMRIRQCSPNKGLQKVLNQMTTFRKAESRLYSLPHTEQRSKLH-EPSESRILQQHQS

Query:  PMKRMYRQQGNEADAVREKIAGRSGKGVDHLQN
         +KR+  +   E + V   I   SG  V + Q+
Subjt:  PMKRMYRQQGNEADAVREKIAGRSGKGVDHLQN

A0A6J1IYL5 DNA replication ATP-dependent helicase/nuclease DNA2 isoform X4

1.4e-06

43.61

Show/hide

Query:  EEETTNDEITLKISPV----KTVSKQLSETIRVLANSSRLSSLRMRIRQCSPNKGLQKVLNQMTTFRKAESRLYSLPHTEQRSKLH-EPSESRILQQHQS
        +E TTNDEIT KISPV    + VSKQL ETIRVLANSSRL+SL  RIRQCS NK                +    L + EQ S L+ +PSE  +   H++
Subjt:  EEETTNDEITLKISPV----KTVSKQLSETIRVLANSSRLSSLRMRIRQCSPNKGLQKVLNQMTTFRKAESRLYSLPHTEQRSKLH-EPSESRILQQHQS

Query:  PMKRMYRQQGNEADAVREKIAGRSGKGVDHLQN
         +KR+  +   E + V   I   SG  V + Q+
Subjt:  PMKRMYRQQGNEADAVREKIAGRSGKGVDHLQN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGAAGAGGAGACTACAAATGATGAGATCACATTGAAGATATCTCCAGTAAAGACTGTTTCAAAGCAATTGTCGGAAACCATAAGAGTTTTGGCGAACTCCTCAAGGCT
CAGCTCTTTGAGAATGAGAATCCGACAGTGCTCACCAAATAAGGGATTACAAAAGGTTCTAAATCAGATGACAACTTTTCGAAAGGCTGAGTCGCGATTATACTCGCTGC
CGCACACAGAGCAAAGAAGCAAGTTACATGAACCTTCGGAATCCCGTATTTTGCAGCAACATCAGTCGCCCATGAAAAGAATGTATCGACAACAAGGCAATGAGGCCGAT
GCTGTTCGAGAAAAAATTGCAGGGAGATCAGGAAAGGGAGTCGATCATCTTCAAAATAGCCAAATCAAGACTCTCACAACCCTCCAGCAATCCAACGACTGCAGAAGGGA
AATGGATGATCTGAAGCTCGAGTTCACGCCCTGGTGGCCTCTACCTTCATTTACGCATTGGACCATACGTTGGTGTAGAGTGGAATTTCGGGTATATCCTTATGAGGAGG
AACTCGAAGAAATCTTGGAGAACTTCAATGGTGGATGA

mRNA sequence

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Protein sequence

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MEEETTNDEITLKISPVKTVSKQLSETIRVLANSSRLSSLRMRIRQCSPNKGLQKVLNQMTTFRKAESRLYSLPHTEQRSKLHEPSESRILQQHQSPMKRMYRQQGNEAD
AVREKIAGRSGKGVDHLQNSQIKTLTTLQQSNDCRREMDDLKLEFTPWWPLPSFTHWTIRWCRVEFRVYPYEEELEEILENFNGG

Lag0029828 (gene) of Sponge gourd (AG-4) v1 genome