; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0029866 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029866
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionphotosynthetic NDH subunit of lumenal location 1, chloroplastic
Genome locationchr8:42710940..42713269
RNA-Seq ExpressionLag0029866
SyntenyLag0029866
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009654 - photosystem II oxygen evolving complex (cellular component)
GO:0019898 - extrinsic component of membrane (cellular component)
GO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002683 - PsbP, C-terminal
IPR016123 - Mog1/PsbP, alpha/beta/alpha sandwich


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022953447.1 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Cucurbita moschata]7.9e-12392.8Show/hide
Query:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTIICSTERTSREESHCNRRPLLLGVGALVTSLLPASSLFAEEVPKNYRAFVDNTDGYSYYY
        MAVSTSCLSWVPT+ASNWK RLLPFNEPSTATCS+SSC+TIICSTERTSR ESHCNRRPLLLGVGAL  SL  AS LFAEEVPKNYRAFVD+TDGYSYYY
Subjt:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTIICSTERTSREESHCNRRPLLLGVGALVTSLLPASSLFAEEVPKNYRAFVDNTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKDIHEEGPLDEVVNFLVKHRFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRTAFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPT KKDIHEEG LDEVVNFLVKHR+AAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRT+FATIA+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKDIHEEGPLDEVVNFLVKHRFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRTAFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

XP_022953456.1 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 [Cucurbita moschata]7.4e-12192.37Show/hide
Query:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTIICSTERTSREESHCNRRPLLLGVGALVTSLLPASSLFAEEVPKNYRAFVDNTDGYSYYY
        MAVSTSCLSWVPT+ASNWK RLLPFNEPSTATCS+SSC+TIICSTERTSR ESHCNRRPLLLGVGAL  SL  AS LFA EVPKNYRAFVD+TDGYSYYY
Subjt:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTIICSTERTSREESHCNRRPLLLGVGALVTSLLPASSLFAEEVPKNYRAFVDNTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKDIHEEGPLDEVVNFLVKHRFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRTAFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPT KKDIHEEG LDEVVNFLVKHR+AAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRT+FATIA+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKDIHEEGPLDEVVNFLVKHRFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRTAFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

XP_022990449.1 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Cucurbita maxima]8.8e-12291.95Show/hide
Query:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTIICSTERTSREESHCNRRPLLLGVGALVTSLLPASSLFAEEVPKNYRAFVDNTDGYSYYY
        MAVSTSCLSWVPT+ASNWK RLLPFNEPSTATCS+SSC+T+ICSTERTSR ES CNRRPLLLGVGAL TSL  A  LFAEEVPKNYRAFVD+TDGYSYYY
Subjt:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTIICSTERTSREESHCNRRPLLLGVGALVTSLLPASSLFAEEVPKNYRAFVDNTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKDIHEEGPLDEVVNFLVKHRFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRTAFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPT KKDIHEEG LDEVVNFLVKHR+AAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRT+FATIA+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKDIHEEGPLDEVVNFLVKHRFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRTAFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

XP_023534746.1 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]5.1e-12291.95Show/hide
Query:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTIICSTERTSREESHCNRRPLLLGVGALVTSLLPASSLFAEEVPKNYRAFVDNTDGYSYYY
        MAVSTSCLSWVPT+ASNWK RLLPFNEPSTATCS+SSC+T+ICSTERTSR ES CNRRPLLLGVGAL TSL  A+ LFAEEVPKNYRAFVD+TDGYSYYY
Subjt:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTIICSTERTSREESHCNRRPLLLGVGALVTSLLPASSLFAEEVPKNYRAFVDNTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKDIHEEGPLDEVVNFLVKHRFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRTAFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPT KKDIHEEG LDEVVNFLVKHR+AAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRT+FATIA+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKDIHEEGPLDEVVNFLVKHRFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRTAFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

XP_038889544.1 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Benincasa hispida]7.9e-12393.64Show/hide
Query:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTIICSTERTSREESHCNRRPLLLGVGALVTSLLPASSLFAEEVPKNYRAFVDNTDGYSYYY
        MAVSTSC SWVPTTASNWKLRLLPFNEPSTAT SFSSCSTI CSTE+TSREE HCNRRPLLLGVGAL TSLL AS LFAEEVPKNYRAFVD+TDGYSYYY
Subjt:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTIICSTERTSREESHCNRRPLLLGVGALVTSLLPASSLFAEEVPKNYRAFVDNTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKDIHEEGPLDEVVNFLVKHRFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRTAFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPT KKDIHEEG LDEVVNFLVKHR+AAPNQKATIYDMKERTIDG+NYYTFEYKLSSRA+SRT+FATIAI
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKDIHEEGPLDEVVNFLVKHRFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRTAFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

TrEMBL top hitse value%identityAlignment
A0A1S3CKZ3 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X17.5e-11991.95Show/hide
Query:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTIICSTERTSREESHCNRRPLLLGVGALVTSLLPASSLFAEEVPKNYRAFVDNTDGYSYYY
        MAVSTSCLSWVPTTASNWKL+LLPFNEP+TAT SFSS STI CS ERTSR+E   NRRPLLLGVGAL TSLL AS LFA+EVPKNYRAFVD TDGYSYYY
Subjt:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTIICSTERTSREESHCNRRPLLLGVGALVTSLLPASSLFAEEVPKNYRAFVDNTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKDIHEEGPLDEVVNFLVKHRFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRTAFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPT KKDIHEEGPLDEVVNFLVKHR+AAPNQK TIYDMKERTIDGKNYYTFEYKLSSRA+SRTAFATIAI
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKDIHEEGPLDEVVNFLVKHRFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRTAFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

A0A6J1GN22 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X23.6e-12192.37Show/hide
Query:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTIICSTERTSREESHCNRRPLLLGVGALVTSLLPASSLFAEEVPKNYRAFVDNTDGYSYYY
        MAVSTSCLSWVPT+ASNWK RLLPFNEPSTATCS+SSC+TIICSTERTSR ESHCNRRPLLLGVGAL  SL  AS LFA EVPKNYRAFVD+TDGYSYYY
Subjt:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTIICSTERTSREESHCNRRPLLLGVGALVTSLLPASSLFAEEVPKNYRAFVDNTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKDIHEEGPLDEVVNFLVKHRFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRTAFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPT KKDIHEEG LDEVVNFLVKHR+AAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRT+FATIA+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKDIHEEGPLDEVVNFLVKHRFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRTAFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

A0A6J1GN93 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X13.8e-12392.8Show/hide
Query:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTIICSTERTSREESHCNRRPLLLGVGALVTSLLPASSLFAEEVPKNYRAFVDNTDGYSYYY
        MAVSTSCLSWVPT+ASNWK RLLPFNEPSTATCS+SSC+TIICSTERTSR ESHCNRRPLLLGVGAL  SL  AS LFAEEVPKNYRAFVD+TDGYSYYY
Subjt:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTIICSTERTSREESHCNRRPLLLGVGALVTSLLPASSLFAEEVPKNYRAFVDNTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKDIHEEGPLDEVVNFLVKHRFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRTAFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPT KKDIHEEG LDEVVNFLVKHR+AAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRT+FATIA+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKDIHEEGPLDEVVNFLVKHRFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRTAFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

A0A6J1JMZ7 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X24.0e-12091.53Show/hide
Query:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTIICSTERTSREESHCNRRPLLLGVGALVTSLLPASSLFAEEVPKNYRAFVDNTDGYSYYY
        MAVSTSCLSWVPT+ASNWK RLLPFNEPSTATCS+SSC+T+ICSTERTSR ES CNRRPLLLGVGAL TSL  A  LFA EVPKNYRAFVD+TDGYSYYY
Subjt:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTIICSTERTSREESHCNRRPLLLGVGALVTSLLPASSLFAEEVPKNYRAFVDNTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKDIHEEGPLDEVVNFLVKHRFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRTAFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPT KKDIHEEG LDEVVNFLVKHR+AAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRT+FATIA+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKDIHEEGPLDEVVNFLVKHRFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRTAFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

A0A6J1JS28 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X14.2e-12291.95Show/hide
Query:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTIICSTERTSREESHCNRRPLLLGVGALVTSLLPASSLFAEEVPKNYRAFVDNTDGYSYYY
        MAVSTSCLSWVPT+ASNWK RLLPFNEPSTATCS+SSC+T+ICSTERTSR ES CNRRPLLLGVGAL TSL  A  LFAEEVPKNYRAFVD+TDGYSYYY
Subjt:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTIICSTERTSREESHCNRRPLLLGVGALVTSLLPASSLFAEEVPKNYRAFVDNTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKDIHEEGPLDEVVNFLVKHRFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRTAFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPT KKDIHEEG LDEVVNFLVKHR+AAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRT+FATIA+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKDIHEEGPLDEVVNFLVKHRFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRTAFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

SwissProt top hitse value%identityAlignment
O23403 PsbP domain-containing protein 1, chloroplastic4.1e-0522.22Show/hide
Query:  RRPLLLG--VGALVTSLLPASSLFAEEVPKNYRAFVDNTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKD---IHEEGPLDEVVNFL
        R+ +++G  +  L+ S     + FA      +R ++D  DGYS+ YP +W +      D  F+D  +  +N+ V+F      +   + + G  +EV   +
Subjt:  RRPLLLG--VGALVTSLLPASSLFAEEVPKNYRAFVDNTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKD---IHEEGPLDEVVNFL

Query:  VKH--------RFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRA-----------------YSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKV
        ++         R     Q   +        DGK YY  E  + S A                 ++R   A + + N R Y++ +   ++ +      L+ 
Subjt:  VKH--------RFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRA-----------------YSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKV

Query:  VADSFRV
        V DSFRV
Subjt:  VADSFRV

O80634 Photosynthetic NDH subunit of lumenal location 1, chloroplastic7.8e-7359.92Show/hide
Query:  AVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTIICSTERTSREESHCN--RRPLLLGVGALVTSLLPASSLFAEEVPKNYRAFVDNTDGYSYY
        ++S  C  + PT +   ++ L P   PS   C   S      S+E T ++ S  N  RR  L+GVG LV + +PA+ L AEE+PK+Y  FVD  DGYSYY
Subjt:  AVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTIICSTERTSREESHCN--RRPLLLGVGALVTSLLPASSLFAEEVPKNYRAFVDNTDGYSYY

Query:  YPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKDIHEEGPLDEVVNFLVKHRFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRTAFATIA
        YPSDWREFDFRAHDSAFKDRYLQLQNVRV+FIPT K DIHE GP++EVV  LVKH+FAAPNQ ATIYDMKER  DGKNYYTFEY L +  Y+ T+FAT+A
Subjt:  YPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKDIHEEGPLDEVVNFLVKHRFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRTAFATIA

Query:  IANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        + N RYYTL+VGAN+RRWR+ +  L+VVADS ++L I
Subjt:  IANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

P82538 PsbP-like protein 1, chloroplastic1.3e-3540.62Show/hide
Query:  STERTSREESHCNRRPLL-LGVGALVTSLLPASSL-FAEEVPKNYRAFVDNTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKDIHEE
        S+  +S  +  C RR ++  GV A   SLL  + L FA E  K + A  DN D Y++ YP  W+E      D  +KD    L++V V  +PT K+ I E 
Subjt:  STERTSREESHCNRRPLL-LGVGALVTSLLPASSL-FAEEVPKNYRAFVDNTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKDIHEE

Query:  GPLDEVVNFLVKHRFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRV
        GP  ++   L+K   A PNQK T+ D  E  +DGK YY FE+ + +R Y+R A  TI + NG +YTL  GAN+RRW + +D L  V DSF++
Subjt:  GPLDEVVNFLVKHRFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRV

Arabidopsis top hitse value%identityAlignment
AT2G39470.1 PsbP-like protein 25.6e-7459.92Show/hide
Query:  AVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTIICSTERTSREESHCN--RRPLLLGVGALVTSLLPASSLFAEEVPKNYRAFVDNTDGYSYY
        ++S  C  + PT +   ++ L P   PS   C   S      S+E T ++ S  N  RR  L+GVG LV + +PA+ L AEE+PK+Y  FVD  DGYSYY
Subjt:  AVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTIICSTERTSREESHCN--RRPLLLGVGALVTSLLPASSLFAEEVPKNYRAFVDNTDGYSYY

Query:  YPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKDIHEEGPLDEVVNFLVKHRFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRTAFATIA
        YPSDWREFDFRAHDSAFKDRYLQLQNVRV+FIPT K DIHE GP++EVV  LVKH+FAAPNQ ATIYDMKER  DGKNYYTFEY L +  Y+ T+FAT+A
Subjt:  YPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKDIHEEGPLDEVVNFLVKHRFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRTAFATIA

Query:  IANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        + N RYYTL+VGAN+RRWR+ +  L+VVADS ++L I
Subjt:  IANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

AT2G39470.2 PsbP-like protein 22.3e-7258.3Show/hide
Query:  AVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTIICSTERTSREESHCNRRPLLLGVGALVTSLLPASSLFAEEVPKNYRAFVDNTDGYSYYYP
        ++S  C  + PT +   ++ L P   PS   C       ++ S        ++  RR  L+GVG LV + +PA+ L AEE+PK+Y  FVD  DGYSYYYP
Subjt:  AVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTIICSTERTSREESHCNRRPLLLGVGALVTSLLPASSLFAEEVPKNYRAFVDNTDGYSYYYP

Query:  SDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKDIHEEGPLDEVVNFLVKHRFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRTAFATIAIA
        SDWREFDFRAHDSAFKDRYLQLQNVRV+FIPT K DIHE GP++EVV  LVKH+FAAPNQ ATIYDMKER  DGKNYYTFEY L +  Y+ T+FAT+A+ 
Subjt:  SDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKDIHEEGPLDEVVNFLVKHRFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRTAFATIAIA

Query:  NGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        N RYYTL+VGAN+RRWR+ +  L+VVADS ++L I
Subjt:  NGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

AT2G39470.3 PsbP-like protein 22.2e-4657.4Show/hide
Query:  AVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTIICSTERTSREESHCNRRPLLLGVGALVTSLLPASSLFAEEVPKNYRAFVDNTDGYSYYYP
        ++S  C  + PT +   ++ L P   PS   C       ++ S        ++  RR  L+GVG LV + +PA+ L AEE+PK+Y  FVD  DGYSYYYP
Subjt:  AVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTIICSTERTSREESHCNRRPLLLGVGALVTSLLPASSLFAEEVPKNYRAFVDNTDGYSYYYP

Query:  SDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKDIHEEGPLDEVVNFLVKHRFAAPNQKATIYDMKE
        SDWREFDFRAHDSAFKDRYLQLQNVRV+FIPT K DIHE GP++EVV  LVKH+FAAPNQ ATIYDMKE
Subjt:  SDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKDIHEEGPLDEVVNFLVKHRFAAPNQKATIYDMKE

AT3G55330.1 PsbP-like protein 19.3e-3740.62Show/hide
Query:  STERTSREESHCNRRPLL-LGVGALVTSLLPASSL-FAEEVPKNYRAFVDNTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKDIHEE
        S+  +S  +  C RR ++  GV A   SLL  + L FA E  K + A  DN D Y++ YP  W+E      D  +KD    L++V V  +PT K+ I E 
Subjt:  STERTSREESHCNRRPLL-LGVGALVTSLLPASSL-FAEEVPKNYRAFVDNTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKDIHEE

Query:  GPLDEVVNFLVKHRFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRV
        GP  ++   L+K   A PNQK T+ D  E  +DGK YY FE+ + +R Y+R A  TI + NG +YTL  GAN+RRW + +D L  V DSF++
Subjt:  GPLDEVVNFLVKHRFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRV

AT4G15510.1 Photosystem II reaction center PsbP family protein2.9e-0622.22Show/hide
Query:  RRPLLLG--VGALVTSLLPASSLFAEEVPKNYRAFVDNTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKD---IHEEGPLDEVVNFL
        R+ +++G  +  L+ S     + FA      +R ++D  DGYS+ YP +W +      D  F+D  +  +N+ V+F      +   + + G  +EV   +
Subjt:  RRPLLLG--VGALVTSLLPASSLFAEEVPKNYRAFVDNTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTVKKD---IHEEGPLDEVVNFL

Query:  VKH--------RFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRA-----------------YSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKV
        ++         R     Q   +        DGK YY  E  + S A                 ++R   A + + N R Y++ +   ++ +      L+ 
Subjt:  VKH--------RFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRA-----------------YSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKV

Query:  VADSFRV
        V DSFRV
Subjt:  VADSFRV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTTTCAACCTCATGCTTGAGTTGGGTTCCGACCACCGCATCTAATTGGAAGCTGAGGTTGCTTCCTTTCAATGAGCCATCGACAGCTACTTGTTCATTTTCTTC
CTGTAGTACCATCATTTGCTCAACTGAGAGAACTTCCCGTGAGGAAAGCCATTGCAATAGAAGGCCGCTTCTGTTGGGAGTTGGAGCACTAGTTACAAGTTTACTCCCTG
CAAGTTCCCTTTTTGCTGAAGAAGTCCCGAAAAATTATCGAGCATTTGTAGACAATACAGATGGGTATTCCTATTATTACCCCTCTGATTGGAGGGAATTTGATTTCAGA
GCCCATGATTCGGCATTCAAGGATCGATACCTGCAACTACAGAATGTTAGAGTGAAGTTCATACCAACAGTGAAAAAAGATATCCATGAAGAAGGCCCATTAGATGAGGT
TGTTAACTTTTTGGTAAAACATCGATTTGCTGCACCAAATCAAAAGGCTACCATATATGACATGAAGGAGCGAACGATTGATGGGAAAAATTATTATACCTTCGAGTATA
AACTTAGTTCTAGAGCGTACTCCCGCACCGCCTTTGCAACCATAGCCATTGCAAATGGTAGGTACTATACTTTGGTAGTTGGGGCAAATGACAGAAGGTGGAGAAGGTAT
CGAGACATGCTTAAAGTGGTTGCCGACTCATTCAGGGTGTTGGATATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTTTCAACCTCATGCTTGAGTTGGGTTCCGACCACCGCATCTAATTGGAAGCTGAGGTTGCTTCCTTTCAATGAGCCATCGACAGCTACTTGTTCATTTTCTTC
CTGTAGTACCATCATTTGCTCAACTGAGAGAACTTCCCGTGAGGAAAGCCATTGCAATAGAAGGCCGCTTCTGTTGGGAGTTGGAGCACTAGTTACAAGTTTACTCCCTG
CAAGTTCCCTTTTTGCTGAAGAAGTCCCGAAAAATTATCGAGCATTTGTAGACAATACAGATGGGTATTCCTATTATTACCCCTCTGATTGGAGGGAATTTGATTTCAGA
GCCCATGATTCGGCATTCAAGGATCGATACCTGCAACTACAGAATGTTAGAGTGAAGTTCATACCAACAGTGAAAAAAGATATCCATGAAGAAGGCCCATTAGATGAGGT
TGTTAACTTTTTGGTAAAACATCGATTTGCTGCACCAAATCAAAAGGCTACCATATATGACATGAAGGAGCGAACGATTGATGGGAAAAATTATTATACCTTCGAGTATA
AACTTAGTTCTAGAGCGTACTCCCGCACCGCCTTTGCAACCATAGCCATTGCAAATGGTAGGTACTATACTTTGGTAGTTGGGGCAAATGACAGAAGGTGGAGAAGGTAT
CGAGACATGCTTAAAGTGGTTGCCGACTCATTCAGGGTGTTGGATATCTGA
Protein sequenceShow/hide protein sequence
MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTIICSTERTSREESHCNRRPLLLGVGALVTSLLPASSLFAEEVPKNYRAFVDNTDGYSYYYPSDWREFDFR
AHDSAFKDRYLQLQNVRVKFIPTVKKDIHEEGPLDEVVNFLVKHRFAAPNQKATIYDMKERTIDGKNYYTFEYKLSSRAYSRTAFATIAIANGRYYTLVVGANDRRWRRY
RDMLKVVADSFRVLDI