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Lag0029919 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029919
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB1, chloroplastic
Genome locationchr8:43129551..43130050
RNA-Seq ExpressionLag0029919
SyntenyLag0029919
Gene Ontology termsGO:0010190 - cytochrome b6f complex assembly (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR021919 - Cofactor assembly of complex C subunit B, CCB1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016624.1 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]3.3e-2277.78Show/hide
Query:  NSAFLLAERVDYSMASYYTSLGLFVMSVPGLWSLIKRSVKSKVVKKTFVGEGEVKKASNQIVGEMLSFSRRLIESFSITDR
        NSAFLLAE V YS ASYYTSLGLFV+SVPGLWSLIKRSVKSKVVKKTFV EGE KKA NQ  GE+LSF  R   +F +TDR
Subjt:  NSAFLLAERVDYSMASYYTSLGLFVMSVPGLWSLIKRSVKSKVVKKTFVGEGEVKKASNQIVGEMLSFSRRLIESFSITDR
XP_022141475.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB1, chloroplastic [Momordica charantia]5.7e-2276.54Show/hide
Query:  NSAFLLAERVDYSMASYYTSLGLFVMSVPGLWSLIKRSVKSKVVKKTFVGEGEVKKASNQIVGEMLSFSRRLIESFSITDR
        NSAF LA+ V YSMASYYTSLGLFV+SVPGLWSLIKRSVKSKVVKKTFV EGE KKA +QI GE+LSF  R   +F +TDR
Subjt:  NSAFLLAERVDYSMASYYTSLGLFVMSVPGLWSLIKRSVKSKVVKKTFVGEGEVKKASNQIVGEMLSFSRRLIESFSITDR
XP_022938901.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB1, chloroplastic [Cucurbita moschata]3.3e-2277.78Show/hide
Query:  NSAFLLAERVDYSMASYYTSLGLFVMSVPGLWSLIKRSVKSKVVKKTFVGEGEVKKASNQIVGEMLSFSRRLIESFSITDR
        NSAFLLAE V YS ASYYTSLGLFV+SVPGLWSLIKRSVKSKVVKKTFV EGE KKA NQ  GE+LSF  R   +F +TDR
Subjt:  NSAFLLAERVDYSMASYYTSLGLFVMSVPGLWSLIKRSVKSKVVKKTFVGEGEVKKASNQIVGEMLSFSRRLIESFSITDR
XP_023550037.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB1, chloroplastic [Cucurbita pepo subsp. pepo]3.3e-2277.78Show/hide
Query:  NSAFLLAERVDYSMASYYTSLGLFVMSVPGLWSLIKRSVKSKVVKKTFVGEGEVKKASNQIVGEMLSFSRRLIESFSITDR
        NSAFLLAE V YS ASYYTSLGLFV+SVPGLWSLIKRSVKSKVVKKTFV EGE KKA NQ  GE+LSF  R   +F +TDR
Subjt:  NSAFLLAERVDYSMASYYTSLGLFVMSVPGLWSLIKRSVKSKVVKKTFVGEGEVKKASNQIVGEMLSFSRRLIESFSITDR
XP_038874658.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB1, chloroplastic [Benincasa hispida]4.4e-2277.78Show/hide
Query:  NSAFLLAERVDYSMASYYTSLGLFVMSVPGLWSLIKRSVKSKVVKKTFVGEGEVKKASNQIVGEMLSFSRRLIESFSITDR
        NSAFLLAE V YSMASYYTSLGLFV+SVPGLWSLIKRSVKSKVVKKT V EGE KK  NQI GE+LSF  R   +F +TDR
Subjt:  NSAFLLAERVDYSMASYYTSLGLFVMSVPGLWSLIKRSVKSKVVKKTFVGEGEVKKASNQIVGEMLSFSRRLIESFSITDR
TrEMBL top hitse value%identityAlignment
A0A1R3ISK8 Uncharacterized protein3.6e-2272.84Show/hide
Query:  NSAFLLAERVDYSMASYYTSLGLFVMSVPGLWSLIKRSVKSKVVKKTFVGEGEVKKASNQIVGEMLSFSRRLIESFSITDR
        +S FLLAE   YS+ASYYTSLGLFV+SVPGLWSLIKRSVKSK+VKKTF+GEGE KKA NQ+ GE+LSF  R   +F++TDR
Subjt:  NSAFLLAERVDYSMASYYTSLGLFVMSVPGLWSLIKRSVKSKVVKKTFVGEGEVKKASNQIVGEMLSFSRRLIESFSITDR
A0A1R3JWS4 Uncharacterized protein3.6e-2272.84Show/hide
Query:  NSAFLLAERVDYSMASYYTSLGLFVMSVPGLWSLIKRSVKSKVVKKTFVGEGEVKKASNQIVGEMLSFSRRLIESFSITDR
        +S FLLAE   YS+ASYYTSLGLFV+SVPGLWSLIKRSVKSK+VKKTF+GEGE KKA NQ+ GE+LSF  R   +F++TDR
Subjt:  NSAFLLAERVDYSMASYYTSLGLFVMSVPGLWSLIKRSVKSKVVKKTFVGEGEVKKASNQIVGEMLSFSRRLIESFSITDR
A0A6J1CI70 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB1, chloroplastic2.8e-2276.54Show/hide
Query:  NSAFLLAERVDYSMASYYTSLGLFVMSVPGLWSLIKRSVKSKVVKKTFVGEGEVKKASNQIVGEMLSFSRRLIESFSITDR
        NSAF LA+ V YSMASYYTSLGLFV+SVPGLWSLIKRSVKSKVVKKTFV EGE KKA +QI GE+LSF  R   +F +TDR
Subjt:  NSAFLLAERVDYSMASYYTSLGLFVMSVPGLWSLIKRSVKSKVVKKTFVGEGEVKKASNQIVGEMLSFSRRLIESFSITDR
A0A6J1FEF5 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB1, chloroplastic1.6e-2277.78Show/hide
Query:  NSAFLLAERVDYSMASYYTSLGLFVMSVPGLWSLIKRSVKSKVVKKTFVGEGEVKKASNQIVGEMLSFSRRLIESFSITDR
        NSAFLLAE V YS ASYYTSLGLFV+SVPGLWSLIKRSVKSKVVKKTFV EGE KKA NQ  GE+LSF  R   +F +TDR
Subjt:  NSAFLLAERVDYSMASYYTSLGLFVMSVPGLWSLIKRSVKSKVVKKTFVGEGEVKKASNQIVGEMLSFSRRLIESFSITDR
A0A6J1JUD8 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB1, chloroplastic4.7e-2276.54Show/hide
Query:  NSAFLLAERVDYSMASYYTSLGLFVMSVPGLWSLIKRSVKSKVVKKTFVGEGEVKKASNQIVGEMLSFSRRLIESFSITDR
        NS FLLAE V YS ASYYTSLGLFV+SVPGLWSLIKRSVKSKVVKKTFV EGE KKA NQ  GE+LSF  R   +F +TDR
Subjt:  NSAFLLAERVDYSMASYYTSLGLFVMSVPGLWSLIKRSVKSKVVKKTFVGEGEVKKASNQIVGEMLSFSRRLIESFSITDR
SwissProt top hitse value%identityAlignment
Q9LSE4 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB1, chloroplastic5.2e-1864.63Show/hide
Query:  NSAFLLAERV-DYSMASYYTSLGLFVMSVPGLWSLIKRSVKSKVVKKTFVGEGEVKKASNQIVGEMLSFSRRLIESFSITDR
        NS  L+ E    YS+ASYYTSLGLFV+SVPGLWSLIKRSVKSK+V+KTFV   +VKK   Q+ GE+LSF  R  ++F+ITDR
Subjt:  NSAFLLAERV-DYSMASYYTSLGLFVMSVPGLWSLIKRSVKSKVVKKTFVGEGEVKKASNQIVGEMLSFSRRLIESFSITDR
Arabidopsis top hitse value%identityAlignment
AT3G26710.1 cofactor assembly of complex C3.7e-1964.63Show/hide
Query:  NSAFLLAERV-DYSMASYYTSLGLFVMSVPGLWSLIKRSVKSKVVKKTFVGEGEVKKASNQIVGEMLSFSRRLIESFSITDR
        NS  L+ E    YS+ASYYTSLGLFV+SVPGLWSLIKRSVKSK+V+KTFV   +VKK   Q+ GE+LSF  R  ++F+ITDR
Subjt:  NSAFLLAERV-DYSMASYYTSLGLFVMSVPGLWSLIKRSVKSKVVKKTFVGEGEVKKASNQIVGEMLSFSRRLIESFSITDR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAGCCGCTCATCGCCCTCCAAGACCACCAACTCTGCCTTCCTCCTCGCTGAGAGAGTCGACTATTCCATGGCGAGTTACTACACTTCTCTCGGCCTCTTCGTCAT
GTCAGTTCCTGGCCTCTGGTCTCTCATCAAGCGATCTGTGAAATCCAAGGTTGTGAAGAAGACATTCGTTGGCGAAGGAGAAGTGAAGAAGGCGTCGAATCAGATTGTTG
GAGAGATGCTGTCGTTTTCTCGGAGATTGATAGAAAGTTTTTCTATCACTGATAGAAAAGCCGAAAAATGCTTAGCTAGAAGCGACGAAGGGGGAAGCTGTTGTAGAAGC
TTTGCTCGAAGAAGGCGTCGAATCAGATTGTTGGAGAGATGTTGTCGTTTTCTCGGAGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGAGCCGCTCATCGCCCTCCAAGACCACCAACTCTGCCTTCCTCCTCGCTGAGAGAGTCGACTATTCCATGGCGAGTTACTACACTTCTCTCGGCCTCTTCGTCAT
GTCAGTTCCTGGCCTCTGGTCTCTCATCAAGCGATCTGTGAAATCCAAGGTTGTGAAGAAGACATTCGTTGGCGAAGGAGAAGTGAAGAAGGCGTCGAATCAGATTGTTG
GAGAGATGCTGTCGTTTTCTCGGAGATTGATAGAAAGTTTTTCTATCACTGATAGAAAAGCCGAAAAATGCTTAGCTAGAAGCGACGAAGGGGGAAGCTGTTGTAGAAGC
TTTGCTCGAAGAAGGCGTCGAATCAGATTGTTGGAGAGATGTTGTCGTTTTCTCGGAGACTGA
Protein sequenceShow/hide protein sequence
MQSRSSPSKTTNSAFLLAERVDYSMASYYTSLGLFVMSVPGLWSLIKRSVKSKVVKKTFVGEGEVKKASNQIVGEMLSFSRRLIESFSITDRKAEKCLARSDEGGSCCRS
FARRRRRIRLLERCCRFLGD