; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0029988 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029988
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionE3 ubiquitin-protein ligase ATL4-like
Genome locationchr8:43641918..43642361
RNA-Seq ExpressionLag0029988
SyntenyLag0029988
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8021557.1 hypothetical protein FH972_007437 [Carpinus fangiana]2.4e-3256.03Show/hide
Query:  MAVVVSVILIFLGIAILVFIHVCIVRRALRSGEFENETTTRGRGNNNGDDAISLRKHDLEKLPCFEYNMAVEEPKGSPVDCAVCLGKFEMGDKCRLLPIC
        MA+++SV L+F GI +L+ IHVCIV RA R G        RG   +      S+ + DL+KLPC++Y  A EE   SPVDCAVCL  F+MGDKCRLLP C
Subjt:  MAVVVSVILIFLGIAILVFIHVCIVRRALRSGEFENETTTRGRGNNNGDDAISLRKHDLEKLPCFEYNMAVEEPKGSPVDCAVCLGKFEMGDKCRLLPIC

Query:  KHSFHAKCVDQWLLSTPICPICRTSTLQSLE--SCGGEGNN
        KHSFHA+CVD WLL TPICPICRTS  +S +  S  GEG++
Subjt:  KHSFHAKCVDQWLLSTPICPICRTSTLQSLE--SCGGEGNN

KAG6578641.1 putative RING-H2 finger protein ATL50, partial [Cucurbita argyrosperma subsp. sororia]1.6e-4474.24Show/hide
Query:  MAVVVSVILIFLGIAILVFIHVCIVRRALRSGEFENETTTRGRGNNNGDDAIS-LRKHDLEKLPCFEYNMAVEEPKGSPVDCAVCLGKFEMGDKCRLLPI
        M ++VS+ILI LGIAILV I+V IV RALR G FENETTT GR NNN  +A   +R+ DLEKLPCF+Y MA+EEP GSPVDCAVCLGKF+MG+KCRLLPI
Subjt:  MAVVVSVILIFLGIAILVFIHVCIVRRALRSGEFENETTTRGRGNNNGDDAIS-LRKHDLEKLPCFEYNMAVEEPKGSPVDCAVCLGKFEMGDKCRLLPI

Query:  CKHSFHAKCVDQWLLSTPICPICRTSTLQSLE
        CKHSFHA+CVD+WLL TP CPICRTSTL+SL+
Subjt:  CKHSFHAKCVDQWLLSTPICPICRTSTLQSLE

XP_011623294.1 RING-H2 finger protein ATL74 [Amborella trichopoda]2.4e-3258.52Show/hide
Query:  MAVVVSVILIFLGIAILVFIHVCIVRRALRSGEFENETTTRGRGNNNGDDAISLRKHDLEKLPCFEYNMAVEEPKGSPVDCAVCLGKFEMGDKCRLLPIC
        MA+V+SVIL+F+GI +LV IHVCIV RALRSG          R N N  ++  + + DL++LPCF+Y    +E KG P+DCAVCL  F+ GDKCRLLPIC
Subjt:  MAVVVSVILIFLGIAILVFIHVCIVRRALRSGEFENETTTRGRGNNNGDDAISLRKHDLEKLPCFEYNMAVEEPKGSPVDCAVCLGKFEMGDKCRLLPIC

Query:  KHSFHAKCVDQWLLSTPICPICRTSTLQSLESCGG
        KHSFHA+CVD WLL  PICPICRTS   S  + GG
Subjt:  KHSFHAKCVDQWLLSTPICPICRTSTLQSLESCGG

XP_022134384.1 E3 ubiquitin-protein ligase ATL4-like [Momordica charantia]9.2e-4569.66Show/hide
Query:  MAVVVSVILIFLGIAILVFIHVCIVRRALRSGEFENETTTRGRGNNNGDDAISLRKHDLEKLPCFEYNMAVEEPKGSPVDCAVCLGKFEMGDKCRLLPIC
        MAV+VSV LI + I ILV IHVCIV RALR G FENE T     +NNGD   S+ + DLEKLPCFE+ MA+EE  GSPVDCAVCLGKFEMGDKCR+LP+C
Subjt:  MAVVVSVILIFLGIAILVFIHVCIVRRALRSGEFENETTTRGRGNNNGDDAISLRKHDLEKLPCFEYNMAVEEPKGSPVDCAVCLGKFEMGDKCRLLPIC

Query:  KHSFHAKCVDQWLLSTPICPICRTSTLQSLESCGGEGNNVSTVPP
        KHSFHA+CVD+WLL TPICPICRT+TL+SL+ CGG   NV  V P
Subjt:  KHSFHAKCVDQWLLSTPICPICRTSTLQSLESCGGEGNNVSTVPP

XP_023551528.1 RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo]4.6e-4471.53Show/hide
Query:  MAVVVSVILIFLGIAILVFIHVCIVRRALRSGEFENETTTRGR-GNNNGDDAISLRKHDLEKLPCFEYNMAVEEPKGSPVDCAVCLGKFEMGDKCRLLPI
        M ++VS+ILI LGIAILV I+V IV RALR G FENE TT GR  NNNG+    +R+ DLEKLPCF+Y MA+EEP GSPVDCAVCLGKF+MG+KCRLLPI
Subjt:  MAVVVSVILIFLGIAILVFIHVCIVRRALRSGEFENETTTRGR-GNNNGDDAISLRKHDLEKLPCFEYNMAVEEPKGSPVDCAVCLGKFEMGDKCRLLPI

Query:  CKHSFHAKCVDQWLLSTPICPICRTSTLQSLESCGGE
        CKHSFHA+CVD+WLL TP CPICRTSTL SL+   G+
Subjt:  CKHSFHAKCVDQWLLSTPICPICRTSTLQSLESCGGE

TrEMBL top hitse value%identityAlignment
A0A5B6YID6 Putative RING-H2 finger protein ATL56-like2.3e-3355.63Show/hide
Query:  MAVVVSVILIFLGIAILVFIHVCIVRRALRSGEFENETTTRGRGNNNGDDAISLRKHDLEKLPCFEYNMAVEEPKGSPVDCAVCLGKFEMGDKCRLLPIC
        MA+V+SVIL+F+GI +LV IHVC+V RA R G        RG        + S+ + DLEKLPCF++     E   SPVDCAVCL  F++GDKCRLLP+C
Subjt:  MAVVVSVILIFLGIAILVFIHVCIVRRALRSGEFENETTTRGRGNNNGDDAISLRKHDLEKLPCFEYNMAVEEPKGSPVDCAVCLGKFEMGDKCRLLPIC

Query:  KHSFHAKCVDQWLLSTPICPICRTSTLQSLESC-GGEGNNVS
        KHSFHA+CVD WLL TPICPICRTS     ++C GGE ++ S
Subjt:  KHSFHAKCVDQWLLSTPICPICRTSTLQSLESC-GGEGNNVS

A0A5N6QVF9 RING-type domain-containing protein1.1e-3256.03Show/hide
Query:  MAVVVSVILIFLGIAILVFIHVCIVRRALRSGEFENETTTRGRGNNNGDDAISLRKHDLEKLPCFEYNMAVEEPKGSPVDCAVCLGKFEMGDKCRLLPIC
        MA+++SV L+F GI +L+ IHVCIV RA R G        RG   +      S+ + DL+KLPC++Y  A EE   SPVDCAVCL  F+MGDKCRLLP C
Subjt:  MAVVVSVILIFLGIAILVFIHVCIVRRALRSGEFENETTTRGRGNNNGDDAISLRKHDLEKLPCFEYNMAVEEPKGSPVDCAVCLGKFEMGDKCRLLPIC

Query:  KHSFHAKCVDQWLLSTPICPICRTSTLQSLE--SCGGEGNN
        KHSFHA+CVD WLL TPICPICRTS  +S +  S  GEG++
Subjt:  KHSFHAKCVDQWLLSTPICPICRTSTLQSLE--SCGGEGNN

A0A6J1BYM3 E3 ubiquitin-protein ligase ATL4-like4.5e-4569.66Show/hide
Query:  MAVVVSVILIFLGIAILVFIHVCIVRRALRSGEFENETTTRGRGNNNGDDAISLRKHDLEKLPCFEYNMAVEEPKGSPVDCAVCLGKFEMGDKCRLLPIC
        MAV+VSV LI + I ILV IHVCIV RALR G FENE T     +NNGD   S+ + DLEKLPCFE+ MA+EE  GSPVDCAVCLGKFEMGDKCR+LP+C
Subjt:  MAVVVSVILIFLGIAILVFIHVCIVRRALRSGEFENETTTRGRGNNNGDDAISLRKHDLEKLPCFEYNMAVEEPKGSPVDCAVCLGKFEMGDKCRLLPIC

Query:  KHSFHAKCVDQWLLSTPICPICRTSTLQSLESCGGEGNNVSTVPP
        KHSFHA+CVD+WLL TPICPICRT+TL+SL+ CGG   NV  V P
Subjt:  KHSFHAKCVDQWLLSTPICPICRTSTLQSLESCGGEGNNVSTVPP

A0A6P6G412 RING-H2 finger protein ATL74-like3.3e-3257.6Show/hide
Query:  MAVVVSVILIFLGIAILVFIHVCIVRRALRSGEFENETTTRGRGNNNGDDAISLRKHDLEKLPCFEYNMAVEEPKGSPVDCAVCLGKFEMGDKCRLLPIC
        MA+++SV+L+F+GI +LV +HVCIV RA RSG  +     R  G N      S+ + DLEKLPC++Y +  +    SPVDCAVCL  F+MG+KCRLLP C
Subjt:  MAVVVSVILIFLGIAILVFIHVCIVRRALRSGEFENETTTRGRGNNNGDDAISLRKHDLEKLPCFEYNMAVEEPKGSPVDCAVCLGKFEMGDKCRLLPIC

Query:  KHSFHAKCVDQWLLSTPICPICRTS
        KHSFHA+CVD+WLL TPICPICR+S
Subjt:  KHSFHAKCVDQWLLSTPICPICRTS

W9SX80 RING-H2 finger protein ATL471.1e-3254.29Show/hide
Query:  MAVVVSVILIFLGIAILVFIHVCIVRRALRSGEFENETTTRGRGNNNGD--DAISLRKHDLEKLPCFEYNMAVEEPKGSPVDCAVCLGKFEMGDKCRLLP
        MA+++S+I +F+GI +L+F+HVCIV RA R G F N +    RG+N  D   + S+ K DLEKLPCF+Y    ++   SPVDCAVCL  F++G+KCRLLP
Subjt:  MAVVVSVILIFLGIAILVFIHVCIVRRALRSGEFENETTTRGRGNNNGD--DAISLRKHDLEKLPCFEYNMAVEEPKGSPVDCAVCLGKFEMGDKCRLLP

Query:  ICKHSFHAKCVDQWLLSTPICPICRTSTLQSLESCGGEGN
        ICKHSFHA+CVD WLL  P CP+CRTS     +S  G G+
Subjt:  ICKHSFHAKCVDQWLLSTPICPICRTSTLQSLESCGGEGN

SwissProt top hitse value%identityAlignment
Q7X843 RING-H2 finger protein ATL481.1e-1350Show/hide
Query:  LEKLPCFEY-NMAVEEPKGSPVDCAVCLGKFEMGDKCRLLPICKHSFHAKCVDQWLLSTPICPICRTS
        ++ LP F Y N+ +   +  P DCAVCL +F   DK RLLP+C H+FH  C+D WLLS   CP+CR S
Subjt:  LEKLPCFEY-NMAVEEPKGSPVDCAVCLGKFEMGDKCRLLPICKHSFHAKCVDQWLLSTPICPICRTS

Q8W571 RING-H2 finger protein ATL327.4e-1334.31Show/hide
Query:  VSVILIFLGIAILVFIHVCIVRRALRSGEFENETTTRGRGNNNGDDAISLRKHDLEKLPCFEYNMAVEEPKGS-PVDCAVCLGKFEMGDKCRLLPICKHS
        V V L FL   + V+I  C      RS    +    R R N+       L    +E  P F Y+   E   GS  ++CA+CL + E  +  RLLPIC H 
Subjt:  VSVILIFLGIAILVFIHVCIVRRALRSGEFENETTTRGRGNNNGDDAISLRKHDLEKLPCFEYNMAVEEPKGS-PVDCAVCLGKFEMGDKCRLLPICKHS

Query:  FHAKCVDQWLLSTPICPICRTSTLQSLESCGGEGNNV
        FH  C+D WL S   CP+CR++        G E + V
Subjt:  FHAKCVDQWLLSTPICPICRTSTLQSLESCGGEGNNV

Q940Q4 RING-H2 finger protein ATL131.1e-1336.03Show/hide
Query:  VVVSVILIFLGIAILVFIHVCIVRRALRSGEFENETTTRGR------GNNNGDDAISLRKHDLEKLPCFEYNMAVEEPKGSPVDCAVCLGKFEMGDKCRL
        +++S+I    G+  L+   +       R   F+N T  +G+       +++G D     +  ++ LP F Y  ++   K  P DCAVCL +FE  DK RL
Subjt:  VVVSVILIFLGIAILVFIHVCIVRRALRSGEFENETTTRGR------GNNNGDDAISLRKHDLEKLPCFEYNMAVEEPKGSPVDCAVCLGKFEMGDKCRL

Query:  LPICKHSFHAKCVDQWLLSTPICPICRTSTLQSLES
        LP C H+FH  C+D WLLS   CP+CR+S L  L S
Subjt:  LPICKHSFHAKCVDQWLLSTPICPICRTSTLQSLES

Q9LY41 E3 ubiquitin-protein ligase ATL41.9e-1332.61Show/hide
Query:  VSVILIFLGIAILVFIHVCIVRRALR------------SGEFENETTTRGRGNNNGDDAISLRKHDLEKLPCFEYNMAVEEPKG-SPVDCAVCLGKFEMG
        V VI++ L + +L+ + +C + R L             S      T+   R + +     + R   L+ LP F+++         +  DCAVCL KFE  
Subjt:  VSVILIFLGIAILVFIHVCIVRRALR------------SGEFENETTTRGRGNNNGDDAISLRKHDLEKLPCFEYNMAVEEPKG-SPVDCAVCLGKFEMG

Query:  DKCRLLPICKHSFHAKCVDQWLLSTPICPICRTSTLQS
        D+ RLLP+C H+FHA C+D WL+S   CP+CR+    S
Subjt:  DKCRLLPICKHSFHAKCVDQWLLSTPICPICRTSTLQS

Q9ZV53 Putative RING-H2 finger protein ATL493.9e-1435.34Show/hide
Query:  VVVSVILIFLGIAILVFIHVCIVRRALRSGEFENETTTRGRGN---NNGDDAISLRKHDLEKLPCFEYNMAVEEPKGSPVDCAVCLGKFEMGDKCRLLPI
        +++S+I    G+  ++   +    R  R   F+N T  +G+     N  D  +   +  ++ LP F Y  ++   K SP DC VCL +FE  DK RLLP 
Subjt:  VVVSVILIFLGIAILVFIHVCIVRRALRSGEFENETTTRGRGN---NNGDDAISLRKHDLEKLPCFEYNMAVEEPKGSPVDCAVCLGKFEMGDKCRLLPI

Query:  CKHSFHAKCVDQWLLSTPICPICRTSTLQSLES
        C H+FH +C+D WLLS   CP+CR++ L    S
Subjt:  CKHSFHAKCVDQWLLSTPICPICRTSTLQSLES

Arabidopsis top hitse value%identityAlignment
AT2G18650.1 RING/U-box superfamily protein2.8e-1535.34Show/hide
Query:  VVVSVILIFLGIAILVFIHVCIVRRALRSGEFENETTTRGRGN---NNGDDAISLRKHDLEKLPCFEYNMAVEEPKGSPVDCAVCLGKFEMGDKCRLLPI
        +++S+I    G+  ++   +    R  R   F+N T  +G+     N  D  +   +  ++ LP F Y  ++   K SP DC VCL +FE  DK RLLP 
Subjt:  VVVSVILIFLGIAILVFIHVCIVRRALRSGEFENETTTRGRGN---NNGDDAISLRKHDLEKLPCFEYNMAVEEPKGSPVDCAVCLGKFEMGDKCRLLPI

Query:  CKHSFHAKCVDQWLLSTPICPICRTSTLQSLES
        C H+FH +C+D WLLS   CP+CR++ L    S
Subjt:  CKHSFHAKCVDQWLLSTPICPICRTSTLQSLES

AT3G48030.1 hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein8.1e-1550Show/hide
Query:  LEKLPCFEY-NMAVEEPKGSPVDCAVCLGKFEMGDKCRLLPICKHSFHAKCVDQWLLSTPICPICRTS
        ++ LP F Y N+ +   +  P DCAVCL +F   DK RLLP+C H+FH  C+D WLLS   CP+CR S
Subjt:  LEKLPCFEY-NMAVEEPKGSPVDCAVCLGKFEMGDKCRLLPICKHSFHAKCVDQWLLSTPICPICRTS

AT3G60220.1 TOXICOS EN LEVADURA 41.4e-1432.61Show/hide
Query:  VSVILIFLGIAILVFIHVCIVRRALR------------SGEFENETTTRGRGNNNGDDAISLRKHDLEKLPCFEYNMAVEEPKG-SPVDCAVCLGKFEMG
        V VI++ L + +L+ + +C + R L             S      T+   R + +     + R   L+ LP F+++         +  DCAVCL KFE  
Subjt:  VSVILIFLGIAILVFIHVCIVRRALR------------SGEFENETTTRGRGNNNGDDAISLRKHDLEKLPCFEYNMAVEEPKG-SPVDCAVCLGKFEMG

Query:  DKCRLLPICKHSFHAKCVDQWLLSTPICPICRTSTLQS
        D+ RLLP+C H+FHA C+D WL+S   CP+CR+    S
Subjt:  DKCRLLPICKHSFHAKCVDQWLLSTPICPICRTSTLQS

AT4G30400.1 RING/U-box superfamily protein8.1e-1536.03Show/hide
Query:  VVVSVILIFLGIAILVFIHVCIVRRALRSGEFENETTTRGR------GNNNGDDAISLRKHDLEKLPCFEYNMAVEEPKGSPVDCAVCLGKFEMGDKCRL
        +++S+I    G+  L+   +       R   F+N T  +G+       +++G D     +  ++ LP F Y  ++   K  P DCAVCL +FE  DK RL
Subjt:  VVVSVILIFLGIAILVFIHVCIVRRALRSGEFENETTTRGR------GNNNGDDAISLRKHDLEKLPCFEYNMAVEEPKGSPVDCAVCLGKFEMGDKCRL

Query:  LPICKHSFHAKCVDQWLLSTPICPICRTSTLQSLES
        LP C H+FH  C+D WLLS   CP+CR+S L  L S
Subjt:  LPICKHSFHAKCVDQWLLSTPICPICRTSTLQSLES

AT4G40070.1 RING/U-box superfamily protein5.3e-1434.31Show/hide
Query:  VSVILIFLGIAILVFIHVCIVRRALRSGEFENETTTRGRGNNNGDDAISLRKHDLEKLPCFEYNMAVEEPKGS-PVDCAVCLGKFEMGDKCRLLPICKHS
        V V L FL   + V+I  C      RS    +    R R N+       L    +E  P F Y+   E   GS  ++CA+CL + E  +  RLLPIC H 
Subjt:  VSVILIFLGIAILVFIHVCIVRRALRSGEFENETTTRGRGNNNGDDAISLRKHDLEKLPCFEYNMAVEEPKGS-PVDCAVCLGKFEMGDKCRLLPICKHS

Query:  FHAKCVDQWLLSTPICPICRTSTLQSLESCGGEGNNV
        FH  C+D WL S   CP+CR++        G E + V
Subjt:  FHAKCVDQWLLSTPICPICRTSTLQSLESCGGEGNNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTGGTGGTATCTGTGATATTGATATTTTTGGGAATTGCAATTTTGGTGTTCATTCATGTGTGCATAGTTAGAAGAGCATTGAGATCAGGAGAGTTTGAAAATGA
AACTACTACTAGGGGAAGAGGCAACAATAATGGAGATGATGCAATAAGCCTGCGCAAACATGACTTGGAGAAGCTGCCTTGCTTTGAATATAATATGGCTGTGGAGGAAC
CAAAGGGGAGCCCTGTGGATTGTGCTGTTTGCTTGGGCAAATTTGAGATGGGGGACAAGTGTAGGTTATTGCCTATTTGCAAGCATAGCTTCCATGCCAAGTGTGTGGAC
CAGTGGCTTTTGTCCACTCCTATTTGCCCTATTTGTCGAACTAGTACGCTTCAGTCTCTCGAGAGTTGTGGCGGAGAAGGCAACAATGTCTCGACGGTTCCACCTTTGAA
TTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTGGTGGTATCTGTGATATTGATATTTTTGGGAATTGCAATTTTGGTGTTCATTCATGTGTGCATAGTTAGAAGAGCATTGAGATCAGGAGAGTTTGAAAATGA
AACTACTACTAGGGGAAGAGGCAACAATAATGGAGATGATGCAATAAGCCTGCGCAAACATGACTTGGAGAAGCTGCCTTGCTTTGAATATAATATGGCTGTGGAGGAAC
CAAAGGGGAGCCCTGTGGATTGTGCTGTTTGCTTGGGCAAATTTGAGATGGGGGACAAGTGTAGGTTATTGCCTATTTGCAAGCATAGCTTCCATGCCAAGTGTGTGGAC
CAGTGGCTTTTGTCCACTCCTATTTGCCCTATTTGTCGAACTAGTACGCTTCAGTCTCTCGAGAGTTGTGGCGGAGAAGGCAACAATGTCTCGACGGTTCCACCTTTGAA
TTGA
Protein sequenceShow/hide protein sequence
MAVVVSVILIFLGIAILVFIHVCIVRRALRSGEFENETTTRGRGNNNGDDAISLRKHDLEKLPCFEYNMAVEEPKGSPVDCAVCLGKFEMGDKCRLLPICKHSFHAKCVD
QWLLSTPICPICRTSTLQSLESCGGEGNNVSTVPPLN