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Lag0029997 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0029997
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNA ligase/cyclic nucleotide phosphodiesterase
Genome locationchr8:43707745..43708296
RNA-Seq ExpressionLag0029997
SyntenyLag0029997
Gene Ontology termsNA
InterPro domainsIPR009097 - Cyclic phosphodiesterase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142350.1 uncharacterized protein LOC101208638 [Cucumis sativus]3.5e-9497.81Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKSFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS+PFLEPTKVESIVK+FASKQEPL LSLSSIGSLPSDNN+LFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKSFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
        FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA

XP_022939795.1 uncharacterized protein LOC111445566 [Cucurbita moschata]4.6e-9497.81Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKSFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVK+FASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKSFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
        FQSQLCEAMRKEGIEIGEEYR GSWIPHC+VAQEVP+ARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA

XP_022964210.1 uncharacterized protein LOC111464296 [Cucurbita moschata]7.8e-9496.72Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKSFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVK+FASKQEPLPLSL+SIGSLP+DNN+LFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKSFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
        FQSQLCEAMRKEGIE GEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT+EA
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA

XP_022993671.1 uncharacterized protein LOC111489594 [Cucurbita maxima]2.1e-9498.36Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKSFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVK+FASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKSFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
        FQSQLCEAMRKEGIEIGEEYR GSWIPHCAVAQEVP+ARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA

XP_038890563.1 uncharacterized protein LOC120080080 [Benincasa hispida]3.5e-9497.27Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKSFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS+PFLEPTKVESIVK+FASKQEPLPLSLSSIGSLPSD+N+LFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKSFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
        FQSQLC+AMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA

TrEMBL top hitse value%identityAlignment
A0A0A0KVB2 Uncharacterized protein1.7e-9497.81Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKSFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS+PFLEPTKVESIVK+FASKQEPL LSLSSIGSLPSDNN+LFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKSFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
        FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA

A0A1S3C834 uncharacterized protein LOC1034980551.7e-9497.81Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKSFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS+PFLEPTKVESIVK+FASKQEPL LSLSSIGSLPSDNN+LFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKSFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
        FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA

A0A5A7T7Y4 RNA ligase/cyclic nucleotide phosphodiesterase1.7e-9497.81Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKSFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS+PFLEPTKVESIVK+FASKQEPL LSLSSIGSLPSDNN+LFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKSFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
        FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA

A0A6J1FNR7 uncharacterized protein LOC1114455662.2e-9497.81Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKSFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVK+FASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKSFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
        FQSQLCEAMRKEGIEIGEEYR GSWIPHC+VAQEVP+ARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA

A0A6J1JWZ6 uncharacterized protein LOC1114895941.0e-9498.36Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKSFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVK+FASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKSFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
        FQSQLCEAMRKEGIEIGEEYR GSWIPHCAVAQEVP+ARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G28140.1 RNA ligase/cyclic nucleotide phosphodiesterase family protein1.7e-7071.2Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS-SPFLEPTKVESIVKSFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLL
        MSQG+AIELYFDPALENQVLKAWNV ARRQIST LI  ESRPHITLFS +  ++ TK+E I+KSF+SKQEP+ LS SSIGS  SD+N LFL P PS+SL+
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS-SPFLEPTKVESIVKSFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLL

Query:  QFQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
        Q Q QLCE ++KEG EIGEEYR+ SW+P C+VA +VPK+R++E F VLRDLKL V GYA+DIGLVEFSPVRE+FSF LGN +E+
Subjt:  QFQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA

AT3G28140.2 RNA ligase/cyclic nucleotide phosphodiesterase family protein6.5e-5467.32Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS-SPFLEPTKVESIVKSFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLL
        MSQG+AIELYFDPALENQVLKAWNV ARRQIST LI  ESRPHITLFS +  ++ TK+E I+KSF+SKQEP+ LS SSIGS  SD+N LFL P PS+SL+
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS-SPFLEPTKVESIVKSFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLL

Query:  QFQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKL
        Q Q QLCE ++KEG EIGEEYR+ SW+P C+VA +VPK+R++E F V     L
Subjt:  QFQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKL

AT5G40190.1 RNA ligase/cyclic nucleotide phosphodiesterase family protein1.1e-7471.04Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKSFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQ
        MS+G+AIELYFDPALENQVLKAWNV ARRQIST+LI  ESRPHITLFS+ F + T++ES++K+F SKQEP+ +S S+IGS  SDNNVLFL P PS+SLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKSFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
         Q+QLC+ ++KE ++IGEEYR+ SW+P C VA +VPK+RMAEAF VLRDLKLPV+GY ++IGLVEFSPVRE+FSF LGNT+E+
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACAAGGCTTTGCGATCGAGCTCTATTTCGATCCGGCACTTGAAAATCAAGTTCTCAAGGCTTGGAATGTACTAGCTCGCCGTCAAATTAGTACCCAACTCATCGA
AATTGAATCACGCCCTCACATTACCCTCTTCTCCAGCCCTTTTCTCGAACCCACAAAAGTTGAATCCATCGTTAAGAGTTTCGCTTCTAAACAGGAACCCTTGCCTTTGT
CCTTGTCGTCAATTGGCAGCCTTCCCAGTGACAACAACGTTCTCTTTCTCGGCCCAGCGCCTTCGATTTCACTCCTCCAATTCCAGTCCCAATTGTGCGAAGCAATGAGG
AAAGAAGGAATCGAAATCGGAGAGGAATATCGCCTCGGCTCGTGGATTCCCCATTGCGCTGTTGCTCAGGAGGTGCCCAAGGCTCGAATGGCTGAGGCATTTTGTGTTCT
AAGGGATTTGAAGCTACCAGTTTCCGGGTATGCAATTGATATTGGGTTGGTGGAATTTTCCCCTGTTCGGGAGCTGTTCTCTTTTGTTCTTGGTAACACTGTTGAAGCTT
GA
mRNA sequenceShow/hide mRNA sequence
ATGTCACAAGGCTTTGCGATCGAGCTCTATTTCGATCCGGCACTTGAAAATCAAGTTCTCAAGGCTTGGAATGTACTAGCTCGCCGTCAAATTAGTACCCAACTCATCGA
AATTGAATCACGCCCTCACATTACCCTCTTCTCCAGCCCTTTTCTCGAACCCACAAAAGTTGAATCCATCGTTAAGAGTTTCGCTTCTAAACAGGAACCCTTGCCTTTGT
CCTTGTCGTCAATTGGCAGCCTTCCCAGTGACAACAACGTTCTCTTTCTCGGCCCAGCGCCTTCGATTTCACTCCTCCAATTCCAGTCCCAATTGTGCGAAGCAATGAGG
AAAGAAGGAATCGAAATCGGAGAGGAATATCGCCTCGGCTCGTGGATTCCCCATTGCGCTGTTGCTCAGGAGGTGCCCAAGGCTCGAATGGCTGAGGCATTTTGTGTTCT
AAGGGATTTGAAGCTACCAGTTTCCGGGTATGCAATTGATATTGGGTTGGTGGAATTTTCCCCTGTTCGGGAGCTGTTCTCTTTTGTTCTTGGTAACACTGTTGAAGCTT
GA
Protein sequenceShow/hide protein sequence
MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKSFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQFQSQLCEAMR
KEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA