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Lag0030006 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0030006
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionHistidine--tRNA ligase
Genome locationchr8:43777492..43777800
RNA-Seq ExpressionLag0030006
SyntenyLag0030006
Gene Ontology termsGO:0004812 - aminoacyl-tRNA ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604395.1 Histidine--tRNA ligase, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]3.0e-1858.82Show/hide
Query:  MKKELKVVGVSEEAIEELLKVLSVKFLTKLEGCFHNALVFDKLVGMHVITPMRLKCDRYSCIEILGGGGEALSDLKQLFSLTEKFGYVDWVKFDASFVCG
        MKKELKVVGVSE+AIEE+L+VLSVK LTKLE                               EILGGGGEA+SDLKQLFSL EKFGY DW++FDAS V G
Subjt:  MKKELKVVGVSEEAIEELLKVLSVKFLTKLEGCFHNALVFDKLVGMHVITPMRLKCDRYSCIEILGGGGEALSDLKQLFSLTEKFGYVDWVKFDASFVCG

Query:  LA
        LA
Subjt:  LA
TYK07323.1 histidine--tRNA ligase [Cucumis melo var. makuwa]1.3e-1859.8Show/hide
Query:  MKKELKVVGVSEEAIEELLKVLSVKFLTKLEGCFHNALVFDKLVGMHVITPMRLKCDRYSCIEILGGGGEALSDLKQLFSLTEKFGYVDWVKFDASFVCG
        MKKELKVVGVSE+AIEELL+VLSVK LTKLE                               E+LGGGGEALSDLKQLFSL EKFGY DW++FDAS V G
Subjt:  MKKELKVVGVSEEAIEELLKVLSVKFLTKLEGCFHNALVFDKLVGMHVITPMRLKCDRYSCIEILGGGGEALSDLKQLFSLTEKFGYVDWVKFDASFVCG

Query:  LA
        LA
Subjt:  LA
XP_004143277.1 histidine--tRNA ligase, chloroplastic/mitochondrial [Cucumis sativus]1.3e-1859.8Show/hide
Query:  MKKELKVVGVSEEAIEELLKVLSVKFLTKLEGCFHNALVFDKLVGMHVITPMRLKCDRYSCIEILGGGGEALSDLKQLFSLTEKFGYVDWVKFDASFVCG
        MKKELKVVGVSE+AIEELL+VLSVK LTKLE                               E+LGGGGEALSDLKQLFSL EKFGY DW++FDAS V G
Subjt:  MKKELKVVGVSEEAIEELLKVLSVKFLTKLEGCFHNALVFDKLVGMHVITPMRLKCDRYSCIEILGGGGEALSDLKQLFSLTEKFGYVDWVKFDASFVCG

Query:  LA
        LA
Subjt:  LA
XP_008462490.1 PREDICTED: histidine--tRNA ligase, chloroplastic/mitochondrial [Cucumis melo]1.3e-1859.8Show/hide
Query:  MKKELKVVGVSEEAIEELLKVLSVKFLTKLEGCFHNALVFDKLVGMHVITPMRLKCDRYSCIEILGGGGEALSDLKQLFSLTEKFGYVDWVKFDASFVCG
        MKKELKVVGVSE+AIEELL+VLSVK LTKLE                               E+LGGGGEALSDLKQLFSL EKFGY DW++FDAS V G
Subjt:  MKKELKVVGVSEEAIEELLKVLSVKFLTKLEGCFHNALVFDKLVGMHVITPMRLKCDRYSCIEILGGGGEALSDLKQLFSLTEKFGYVDWVKFDASFVCG

Query:  LA
        LA
Subjt:  LA
XP_023544233.1 histidine--tRNA ligase, chloroplastic/mitochondrial isoform X2 [Cucurbita pepo subsp. pepo]3.0e-1858.82Show/hide
Query:  MKKELKVVGVSEEAIEELLKVLSVKFLTKLEGCFHNALVFDKLVGMHVITPMRLKCDRYSCIEILGGGGEALSDLKQLFSLTEKFGYVDWVKFDASFVCG
        MKKELKVVGVSE+AIEE+L+VLSVK LTKLE                               EILGGGGEA+SDLKQLFSL EKFGY DW++FDAS V G
Subjt:  MKKELKVVGVSEEAIEELLKVLSVKFLTKLEGCFHNALVFDKLVGMHVITPMRLKCDRYSCIEILGGGGEALSDLKQLFSLTEKFGYVDWVKFDASFVCG

Query:  LA
        LA
Subjt:  LA
TrEMBL top hitse value%identityAlignment
A0A0A0KER6 Histidine--tRNA ligase6.5e-1959.8Show/hide
Query:  MKKELKVVGVSEEAIEELLKVLSVKFLTKLEGCFHNALVFDKLVGMHVITPMRLKCDRYSCIEILGGGGEALSDLKQLFSLTEKFGYVDWVKFDASFVCG
        MKKELKVVGVSE+AIEELL+VLSVK LTKLE                               E+LGGGGEALSDLKQLFSL EKFGY DW++FDAS V G
Subjt:  MKKELKVVGVSEEAIEELLKVLSVKFLTKLEGCFHNALVFDKLVGMHVITPMRLKCDRYSCIEILGGGGEALSDLKQLFSLTEKFGYVDWVKFDASFVCG

Query:  LA
        LA
Subjt:  LA
A0A1S3CHK2 Histidine--tRNA ligase6.5e-1959.8Show/hide
Query:  MKKELKVVGVSEEAIEELLKVLSVKFLTKLEGCFHNALVFDKLVGMHVITPMRLKCDRYSCIEILGGGGEALSDLKQLFSLTEKFGYVDWVKFDASFVCG
        MKKELKVVGVSE+AIEELL+VLSVK LTKLE                               E+LGGGGEALSDLKQLFSL EKFGY DW++FDAS V G
Subjt:  MKKELKVVGVSEEAIEELLKVLSVKFLTKLEGCFHNALVFDKLVGMHVITPMRLKCDRYSCIEILGGGGEALSDLKQLFSLTEKFGYVDWVKFDASFVCG

Query:  LA
        LA
Subjt:  LA
A0A5A7VDI2 Histidine--tRNA ligase6.5e-1959.8Show/hide
Query:  MKKELKVVGVSEEAIEELLKVLSVKFLTKLEGCFHNALVFDKLVGMHVITPMRLKCDRYSCIEILGGGGEALSDLKQLFSLTEKFGYVDWVKFDASFVCG
        MKKELKVVGVSE+AIEELL+VLSVK LTKLE                               E+LGGGGEALSDLKQLFSL EKFGY DW++FDAS V G
Subjt:  MKKELKVVGVSEEAIEELLKVLSVKFLTKLEGCFHNALVFDKLVGMHVITPMRLKCDRYSCIEILGGGGEALSDLKQLFSLTEKFGYVDWVKFDASFVCG

Query:  LA
        LA
Subjt:  LA
A0A5D3C5Z0 Histidine--tRNA ligase6.5e-1959.8Show/hide
Query:  MKKELKVVGVSEEAIEELLKVLSVKFLTKLEGCFHNALVFDKLVGMHVITPMRLKCDRYSCIEILGGGGEALSDLKQLFSLTEKFGYVDWVKFDASFVCG
        MKKELKVVGVSE+AIEELL+VLSVK LTKLE                               E+LGGGGEALSDLKQLFSL EKFGY DW++FDAS V G
Subjt:  MKKELKVVGVSEEAIEELLKVLSVKFLTKLEGCFHNALVFDKLVGMHVITPMRLKCDRYSCIEILGGGGEALSDLKQLFSLTEKFGYVDWVKFDASFVCG

Query:  LA
        LA
Subjt:  LA
A0A6J1IL10 Histidine--tRNA ligase1.4e-1858.82Show/hide
Query:  MKKELKVVGVSEEAIEELLKVLSVKFLTKLEGCFHNALVFDKLVGMHVITPMRLKCDRYSCIEILGGGGEALSDLKQLFSLTEKFGYVDWVKFDASFVCG
        MKKELKVVGVSE+AIEE+L+VLSVK LTKLE                               EILGGGGEA+SDLKQLFSL EKFGY DW++FDAS V G
Subjt:  MKKELKVVGVSEEAIEELLKVLSVKFLTKLEGCFHNALVFDKLVGMHVITPMRLKCDRYSCIEILGGGGEALSDLKQLFSLTEKFGYVDWVKFDASFVCG

Query:  LA
        LA
Subjt:  LA
SwissProt top hitse value%identityAlignment
O82413 Histidine--tRNA ligase, chloroplastic/mitochondrial5.5e-1547.06Show/hide
Query:  MKKELKVVGVSEEAIEELLKVLSVKFLTKLEGCFHNALVFDKLVGMHVITPMRLKCDRYSCIEILGGGGEALSDLKQLFSLTEKFGYVDWVKFDASFVCG
        +KKEL   G+SE+AIE+LL+VLSVK L  LE                               +I+GG GEA++DLKQLFSL EKFGY +W++FDAS V G
Subjt:  MKKELKVVGVSEEAIEELLKVLSVKFLTKLEGCFHNALVFDKLVGMHVITPMRLKCDRYSCIEILGGGGEALSDLKQLFSLTEKFGYVDWVKFDASFVCG

Query:  LA
        LA
Subjt:  LA
Arabidopsis top hitse value%identityAlignment
AT3G46100.1 Histidyl-tRNA synthetase 13.9e-1647.06Show/hide
Query:  MKKELKVVGVSEEAIEELLKVLSVKFLTKLEGCFHNALVFDKLVGMHVITPMRLKCDRYSCIEILGGGGEALSDLKQLFSLTEKFGYVDWVKFDASFVCG
        +KKEL   G+SE+AIE+LL+VLSVK L  LE                               +I+GG GEA++DLKQLFSL EKFGY +W++FDAS V G
Subjt:  MKKELKVVGVSEEAIEELLKVLSVKFLTKLEGCFHNALVFDKLVGMHVITPMRLKCDRYSCIEILGGGGEALSDLKQLFSLTEKFGYVDWVKFDASFVCG

Query:  LA
        LA
Subjt:  LA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGGAACTGAAGGTCGTGGGTGTATCAGAGGAGGCTATTGAGGAGTTGCTGAAAGTTCTTTCAGTAAAGTTTTTGACAAAGTTAGAAGGTTGTTTTCATAATGC
TTTAGTCTTTGACAAATTAGTTGGAATGCATGTGATAACTCCAATGAGGTTGAAGTGTGATCGTTATTCTTGCATAGAAATACTTGGAGGTGGTGGCGAAGCATTGTCTG
ATCTGAAGCAGCTATTTTCTCTTACTGAAAAGTTTGGGTATGTTGATTGGGTCAAATTTGATGCATCATTTGTCTGTGGCCTTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGGAACTGAAGGTCGTGGGTGTATCAGAGGAGGCTATTGAGGAGTTGCTGAAAGTTCTTTCAGTAAAGTTTTTGACAAAGTTAGAAGGTTGTTTTCATAATGC
TTTAGTCTTTGACAAATTAGTTGGAATGCATGTGATAACTCCAATGAGGTTGAAGTGTGATCGTTATTCTTGCATAGAAATACTTGGAGGTGGTGGCGAAGCATTGTCTG
ATCTGAAGCAGCTATTTTCTCTTACTGAAAAGTTTGGGTATGTTGATTGGGTCAAATTTGATGCATCATTTGTCTGTGGCCTTGCTTAA
Protein sequenceShow/hide protein sequence
MKKELKVVGVSEEAIEELLKVLSVKFLTKLEGCFHNALVFDKLVGMHVITPMRLKCDRYSCIEILGGGGEALSDLKQLFSLTEKFGYVDWVKFDASFVCGLA