; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0030012 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0030012
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionMetalloendoproteinase 3-MMP-like
Genome locationchr8:43807024..43807559
RNA-Seq ExpressionLag0030012
SyntenyLag0030012
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0030198 - extracellular matrix organization (biological process)
GO:0030574 - collagen catabolic process (biological process)
GO:0031012 - extracellular matrix (cellular component)
GO:0031225 - anchored component of membrane (cellular component)
GO:0004222 - metalloendopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001818 - Peptidase M10, metallopeptidase
IPR002477 - Peptidoglycan binding-like
IPR021190 - Peptidase M10A
IPR024079 - Metallopeptidase, catalytic domain superfamily
IPR036365 - PGBD-like superfamily
IPR036366 - PGBD superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037452.1 metalloendoproteinase 3-MMP-like [Cucumis melo var. makuwa]8.1e-3467.52Show/hide
Query:  MASKLCLQLFVVVLLSFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDRLEGIHSVKTYLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNAS
        MASKLCLQLF  +L +FI PH+ SAR L  HK SR LFP+HL GSRK D  EGIH VK YLQRYGYLS   +NN   DAFD+ LESA+K YQK FKLN S
Subjt:  MASKLCLQLFVVVLLSFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDRLEGIHSVKTYLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNAS

Query:  GILDKETLAQMSKPRCG
        G+LD+ETL QM++PRCG
Subjt:  GILDKETLAQMSKPRCG

KAA0037462.1 metalloendoproteinase 5-MMP-like [Cucumis melo var. makuwa]1.7e-3164.17Show/hide
Query:  MASKLCLQLFVVVLLSFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDRL-EGIHSVKTYLQRYGYLSKNNSH---ADAFDEPLESAVKRYQKFFKLNA
        MASKLCLQLF  +LL+F+ PH+ SAR L  HK SR LFP+HL GS K D + EGIH VK YLQRYGY S  N++    D FD  LESA+K YQKF KL  
Subjt:  MASKLCLQLFVVVLLSFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDRL-EGIHSVKTYLQRYGYLSKNNSH---ADAFDEPLESAVKRYQKFFKLNA

Query:  SGILDKETLAQMSKPRCGTR
        SG+LD+ETL QMSKPRCG R
Subjt:  SGILDKETLAQMSKPRCGTR

XP_008458911.1 PREDICTED: metalloendoproteinase 3-MMP-like [Cucumis melo]3.1e-3366.67Show/hide
Query:  MASKLCLQLFVVVLLSFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDRLEGIHSVKTYLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNAS
        M SKLCLQLF  +L +FI PH+ SAR L  HK SR LFP+HL GSRK D  EGIH VK YLQRYGYLS   +NN   DAFD+ LESA+K YQK FKLN S
Subjt:  MASKLCLQLFVVVLLSFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDRLEGIHSVKTYLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNAS

Query:  GILDKETLAQMSKPRCG
        G+LD+ETL QM++PRCG
Subjt:  GILDKETLAQMSKPRCG

XP_008458912.1 PREDICTED: metalloendoproteinase 3-MMP-like [Cucumis melo]1.7e-3165.83Show/hide
Query:  MASKLCLQLFVVVLLSFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDRL-EGIHSVKTYLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNA
        MASKLCLQLF  +LL+FI PH+ SAR L  HK S  LFPKHL GS K D + EGIH VK YLQRYGYLS   +NN   DAFD+ LESA+K YQKF K+  
Subjt:  MASKLCLQLFVVVLLSFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDRL-EGIHSVKTYLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNA

Query:  SGILDKETLAQMSKPRCGTR
        SG+LD+ETL QMS PRCG R
Subjt:  SGILDKETLAQMSKPRCGTR

XP_008458913.1 PREDICTED: metalloendoproteinase 5-MMP-like [Cucumis melo]1.7e-3164.17Show/hide
Query:  MASKLCLQLFVVVLLSFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDRL-EGIHSVKTYLQRYGYLSKNNSH---ADAFDEPLESAVKRYQKFFKLNA
        MASKLCLQLF  +LL+F+ PH+ SAR L  HK SR LFP+HL GS K D + EGIH VK YLQRYGY S  N++    D FD  LESA+K YQKF KL  
Subjt:  MASKLCLQLFVVVLLSFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDRL-EGIHSVKTYLQRYGYLSKNNSH---ADAFDEPLESAVKRYQKFFKLNA

Query:  SGILDKETLAQMSKPRCGTR
        SG+LD+ETL QMSKPRCG R
Subjt:  SGILDKETLAQMSKPRCGTR

TrEMBL top hitse value%identityAlignment
A0A1S3C8Z2 metalloendoproteinase 3-MMP-like1.5e-3366.67Show/hide
Query:  MASKLCLQLFVVVLLSFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDRLEGIHSVKTYLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNAS
        M SKLCLQLF  +L +FI PH+ SAR L  HK SR LFP+HL GSRK D  EGIH VK YLQRYGYLS   +NN   DAFD+ LESA+K YQK FKLN S
Subjt:  MASKLCLQLFVVVLLSFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDRLEGIHSVKTYLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNAS

Query:  GILDKETLAQMSKPRCG
        G+LD+ETL QM++PRCG
Subjt:  GILDKETLAQMSKPRCG

A0A1S3CA77 metalloendoproteinase 5-MMP-like8.2e-3264.17Show/hide
Query:  MASKLCLQLFVVVLLSFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDRL-EGIHSVKTYLQRYGYLSKNNSH---ADAFDEPLESAVKRYQKFFKLNA
        MASKLCLQLF  +LL+F+ PH+ SAR L  HK SR LFP+HL GS K D + EGIH VK YLQRYGY S  N++    D FD  LESA+K YQKF KL  
Subjt:  MASKLCLQLFVVVLLSFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDRL-EGIHSVKTYLQRYGYLSKNNSH---ADAFDEPLESAVKRYQKFFKLNA

Query:  SGILDKETLAQMSKPRCGTR
        SG+LD+ETL QMSKPRCG R
Subjt:  SGILDKETLAQMSKPRCGTR

A0A5A7T1Y6 Metalloendoproteinase 5-MMP-like8.2e-3264.17Show/hide
Query:  MASKLCLQLFVVVLLSFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDRL-EGIHSVKTYLQRYGYLSKNNSH---ADAFDEPLESAVKRYQKFFKLNA
        MASKLCLQLF  +LL+F+ PH+ SAR L  HK SR LFP+HL GS K D + EGIH VK YLQRYGY S  N++    D FD  LESA+K YQKF KL  
Subjt:  MASKLCLQLFVVVLLSFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDRL-EGIHSVKTYLQRYGYLSKNNSH---ADAFDEPLESAVKRYQKFFKLNA

Query:  SGILDKETLAQMSKPRCGTR
        SG+LD+ETL QMSKPRCG R
Subjt:  SGILDKETLAQMSKPRCGTR

A0A5D3BRA5 Metalloendoproteinase 3-MMP-like8.2e-3265.83Show/hide
Query:  MASKLCLQLFVVVLLSFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDRL-EGIHSVKTYLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNA
        MASKLCLQLF  +LL+FI PH+ SAR L  HK S  LFPKHL GS K D + EGIH VK YLQRYGYLS   +NN   DAFD+ LESA+K YQKF K+  
Subjt:  MASKLCLQLFVVVLLSFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDRL-EGIHSVKTYLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNA

Query:  SGILDKETLAQMSKPRCGTR
        SG+LD+ETL QMS PRCG R
Subjt:  SGILDKETLAQMSKPRCGTR

A0A5D3BUL7 Metalloendoproteinase 3-MMP-like3.9e-3467.52Show/hide
Query:  MASKLCLQLFVVVLLSFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDRLEGIHSVKTYLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNAS
        MASKLCLQLF  +L +FI PH+ SAR L  HK SR LFP+HL GSRK D  EGIH VK YLQRYGYLS   +NN   DAFD+ LESA+K YQK FKLN S
Subjt:  MASKLCLQLFVVVLLSFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDRLEGIHSVKTYLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNAS

Query:  GILDKETLAQMSKPRCG
        G+LD+ETL QM++PRCG
Subjt:  GILDKETLAQMSKPRCG

SwissProt top hitse value%identityAlignment
O04529 Metalloendoproteinase 2-MMP1.2e-0838.36Show/hide
Query:  GSRKGDRLEGIHSVKTYLQRYGYLSK--NNSHADAFDEPLESAVKRYQKFFKLNASGILDKETLAQMSKPRCG
        G   G  ++G++ +K Y QR+GY+ +  + +  D FD+ L++AV+ YQ  F LN +G LD  T+  +  PRCG
Subjt:  GSRKGDRLEGIHSVKTYLQRYGYLSK--NNSHADAFDEPLESAVKRYQKFFKLNASGILDKETLAQMSKPRCG

O04529 Metalloendoproteinase 2-MMP3.7e-0550Show/hide
Query:  LHELGHILGLGHSDIEAAIMRPDTGAGTTKTKLHPDDNLAGIRVLY
        +HE+GH+LGLGHS +E +IM P    G  K  L  DD + GI+ LY
Subjt:  LHELGHILGLGHSDIEAAIMRPDTGAGTTKTKLHPDDNLAGIRVLY

P29136 Metalloendoproteinase 11.6e-0841.79Show/hide
Query:  GDRLEGIHSVKTYLQRYGYLSKNNSHADAFDEPLESAVKRYQKFFKLNASGILDKETLAQMSKPRCG
        G   +G+ +VK Y    GY+       D FD+ L SA+K YQK + LN +G  D  TL Q+  PRCG
Subjt:  GDRLEGIHSVKTYLQRYGYLSKNNSHADAFDEPLESAVKRYQKFFKLNASGILDKETLAQMSKPRCG

Q5XF51 Metalloendoproteinase 3-MMP2.9e-1032.5Show/hide
Query:  VVLLSFIAPHVISARDLDIHKSSRPLFPKHLQ--------------GSRKGDRLEGIHSVKTYLQRYGYLSKNN---SHADAFDEPLESAVKRYQKFFKL
        +V L F AP  +SA     + +S  + P+ L+              G   G + +G++ +K Y Q +GY+++ N   +  D FD+ L++AV+ YQ+ F+L
Subjt:  VVLLSFIAPHVISARDLDIHKSSRPLFPKHLQ--------------GSRKGDRLEGIHSVKTYLQRYGYLSKNN---SHADAFDEPLESAVKRYQKFFKL

Query:  NASGILDKETLAQMSKPRCG
        N +G+LD+ TL  +  PRCG
Subjt:  NASGILDKETLAQMSKPRCG

Q5XF51 Metalloendoproteinase 3-MMP2.8e-0547.83Show/hide
Query:  LHELGHILGLGHSDIEAAIMRPDTGAGTTKTKLHPDDNLAGIRVLY
        +HE+GH+LGLGHS +E +IM P    G  K  L  DD + G++ LY
Subjt:  LHELGHILGLGHSDIEAAIMRPDTGAGTTKTKLHPDDNLAGIRVLY

Q9Y5R2 Matrix metalloproteinase-242.6e-0636.49Show/hide
Query:  KGDRLEGIHSVKTYLQRYGYLSKNNSHADAFD--EPLESAVKRYQKFFKLNASGILDKETLAQMSKPRCGTRLH
        + D  E   + + +L+ YGYL   +S A A    + L+SAV   Q+F+ +  +G+LD+ T+  M KPRCG   H
Subjt:  KGDRLEGIHSVKTYLQRYGYLSKNNSHADAFD--EPLESAVKRYQKFFKLNASGILDKETLAQMSKPRCGTRLH

Q9ZUJ5 Metalloendoproteinase 5-MMP9.1e-1235.59Show/hide
Query:  LFVVVLLSFIAPHVISARDLDIHKSSRPL------------FPKHLQGSRKGDRLEGIHSVKTYLQRYGYLSKNNSHADAFDEPLESAVKRYQKFFKLNA
        L + +L+ F   + ISA+      S  PL            F K L G   G+ + G+  +K Y +R+GY++   +  D FD+ L+SA+  YQK F L  
Subjt:  LFVVVLLSFIAPHVISARDLDIHKSSRPL------------FPKHLQGSRKGDRLEGIHSVKTYLQRYGYLSKNNSHADAFDEPLESAVKRYQKFFKLNA

Query:  SGILDKETLAQMSKPRCG
        +G LD  TL Q+ KPRCG
Subjt:  SGILDKETLAQMSKPRCG

Q9ZUJ5 Metalloendoproteinase 5-MMP1.3e-0552.17Show/hide
Query:  LHELGHILGLGHSDIEAAIMRPDTGAGTTKTKLHPDDNLAGIRVLY
        +HE+GH+LGLGHS +E AIM P    G  K +L  DD + GI+ LY
Subjt:  LHELGHILGLGHSDIEAAIMRPDTGAGTTKTKLHPDDNLAGIRVLY

Arabidopsis top hitse value%identityAlignment
AT1G24140.1 Matrixin family protein2.1e-1132.5Show/hide
Query:  VVLLSFIAPHVISARDLDIHKSSRPLFPKHLQ--------------GSRKGDRLEGIHSVKTYLQRYGYLSKNN---SHADAFDEPLESAVKRYQKFFKL
        +V L F AP  +SA     + +S  + P+ L+              G   G + +G++ +K Y Q +GY+++ N   +  D FD+ L++AV+ YQ+ F+L
Subjt:  VVLLSFIAPHVISARDLDIHKSSRPLFPKHLQ--------------GSRKGDRLEGIHSVKTYLQRYGYLSKNN---SHADAFDEPLESAVKRYQKFFKL

Query:  NASGILDKETLAQMSKPRCG
        N +G+LD+ TL  +  PRCG
Subjt:  NASGILDKETLAQMSKPRCG

AT1G24140.1 Matrixin family protein2.0e-0647.83Show/hide
Query:  LHELGHILGLGHSDIEAAIMRPDTGAGTTKTKLHPDDNLAGIRVLY
        +HE+GH+LGLGHS +E +IM P    G  K  L  DD + G++ LY
Subjt:  LHELGHILGLGHSDIEAAIMRPDTGAGTTKTKLHPDDNLAGIRVLY

AT1G59970.1 Matrixin family protein6.4e-1335.59Show/hide
Query:  LFVVVLLSFIAPHVISARDLDIHKSSRPL------------FPKHLQGSRKGDRLEGIHSVKTYLQRYGYLSKNNSHADAFDEPLESAVKRYQKFFKLNA
        L + +L+ F   + ISA+      S  PL            F K L G   G+ + G+  +K Y +R+GY++   +  D FD+ L+SA+  YQK F L  
Subjt:  LFVVVLLSFIAPHVISARDLDIHKSSRPL------------FPKHLQGSRKGDRLEGIHSVKTYLQRYGYLSKNNSHADAFDEPLESAVKRYQKFFKLNA

Query:  SGILDKETLAQMSKPRCG
        +G LD  TL Q+ KPRCG
Subjt:  SGILDKETLAQMSKPRCG

AT1G59970.1 Matrixin family protein9.0e-0752.17Show/hide
Query:  LHELGHILGLGHSDIEAAIMRPDTGAGTTKTKLHPDDNLAGIRVLY
        +HE+GH+LGLGHS +E AIM P    G  K +L  DD + GI+ LY
Subjt:  LHELGHILGLGHSDIEAAIMRPDTGAGTTKTKLHPDDNLAGIRVLY

AT1G70170.1 matrix metalloproteinase8.7e-1038.36Show/hide
Query:  GSRKGDRLEGIHSVKTYLQRYGYLSK--NNSHADAFDEPLESAVKRYQKFFKLNASGILDKETLAQMSKPRCG
        G   G  ++G++ +K Y QR+GY+ +  + +  D FD+ L++AV+ YQ  F LN +G LD  T+  +  PRCG
Subjt:  GSRKGDRLEGIHSVKTYLQRYGYLSK--NNSHADAFDEPLESAVKRYQKFFKLNASGILDKETLAQMSKPRCG

AT1G70170.1 matrix metalloproteinase2.6e-0650Show/hide
Query:  LHELGHILGLGHSDIEAAIMRPDTGAGTTKTKLHPDDNLAGIRVLY
        +HE+GH+LGLGHS +E +IM P    G  K  L  DD + GI+ LY
Subjt:  LHELGHILGLGHSDIEAAIMRPDTGAGTTKTKLHPDDNLAGIRVLY

AT2G45040.1 Matrixin family protein3.8e-0543.48Show/hide
Query:  LHELGHILGLGHSDIEAAIMRPDTGAGTTKTKLHPDDNLAGIRVLY
        +HE+GH+LGLGHS ++ A M P     + K  L+ DD + G++ LY
Subjt:  LHELGHILGLGHSDIEAAIMRPDTGAGTTKTKLHPDDNLAGIRVLY

AT4G16640.1 Matrixin family protein1.0e-0551.11Show/hide
Query:  HELGHILGLGHSDIEAAIMRPDTGAGTTKTKLHPDDNLAGIRVLY
        HE+GH+LGLGHS  E+A+M P     T K  L  DD +AG+  LY
Subjt:  HELGHILGLGHSDIEAAIMRPDTGAGTTKTKLHPDDNLAGIRVLY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTAAATTATGTCTCCAACTCTTCGTCGTCGTCCTCCTCTCCTTCATTGCACCTCACGTGATCTCGGCACGTGATCTTGACATCCACAAATCTTCTCGCCCTCT
ATTTCCCAAGCATCTTCAAGGAAGTCGCAAAGGCGACAGGCTCGAAGGAATCCACAGCGTCAAGACGTACCTACAACGTTACGGTTACTTGAGCAAAAACAATTCCCATG
CAGACGCATTCGACGAGCCCTTGGAATCCGCCGTTAAGAGATACCAAAAATTCTTCAAGCTTAACGCGAGCGGGATTTTGGACAAGGAGACGCTAGCTCAAATGTCGAAG
CCTCGATGTGGGACCAGGTTGCATGAGCTGGGGCATATTCTTGGGCTTGGCCACAGCGACATTGAAGCCGCCATCATGCGGCCTGACACGGGCGCTGGAACCACCAAGAC
CAAGTTACATCCTGACGATAATCTTGCTGGGATTCGTGTTTTATACCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTAAATTATGTCTCCAACTCTTCGTCGTCGTCCTCCTCTCCTTCATTGCACCTCACGTGATCTCGGCACGTGATCTTGACATCCACAAATCTTCTCGCCCTCT
ATTTCCCAAGCATCTTCAAGGAAGTCGCAAAGGCGACAGGCTCGAAGGAATCCACAGCGTCAAGACGTACCTACAACGTTACGGTTACTTGAGCAAAAACAATTCCCATG
CAGACGCATTCGACGAGCCCTTGGAATCCGCCGTTAAGAGATACCAAAAATTCTTCAAGCTTAACGCGAGCGGGATTTTGGACAAGGAGACGCTAGCTCAAATGTCGAAG
CCTCGATGTGGGACCAGGTTGCATGAGCTGGGGCATATTCTTGGGCTTGGCCACAGCGACATTGAAGCCGCCATCATGCGGCCTGACACGGGCGCTGGAACCACCAAGAC
CAAGTTACATCCTGACGATAATCTTGCTGGGATTCGTGTTTTATACCCTTAG
Protein sequenceShow/hide protein sequence
MASKLCLQLFVVVLLSFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDRLEGIHSVKTYLQRYGYLSKNNSHADAFDEPLESAVKRYQKFFKLNASGILDKETLAQMSK
PRCGTRLHELGHILGLGHSDIEAAIMRPDTGAGTTKTKLHPDDNLAGIRVLYP