; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0030025 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0030025
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionmetalloendoproteinase 2-MMP-like
Genome locationchr8:43890378..43890827
RNA-Seq ExpressionLag0030025
SyntenyLag0030025
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0030198 - extracellular matrix organization (biological process)
GO:0030574 - collagen catabolic process (biological process)
GO:0031012 - extracellular matrix (cellular component)
GO:0031225 - anchored component of membrane (cellular component)
GO:0004222 - metalloendopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR002477 - Peptidoglycan binding-like
IPR036365 - PGBD-like superfamily
IPR036366 - PGBD superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578617.1 Metalloendoproteinase 2-MMP, partial [Cucurbita argyrosperma subsp. sororia]4.3e-5075.84Show/hide
Query:  MAFQGSSVFFNFSFFLLITLFPLISSSSPSNSHGLVFLNNLNGCKKGDKVEGIHQMKKYLHHFGYLDD-VHIH----DDEFDELLESAIKTYQINYNLKA
        MA  G S  F FS  LL++LFPL SS     SHGLVFLNNL+GCKKGDKVEGI QMKKYL  FGYL+D VH+H    DDEFDELLESAIKTYQINYNLKA
Subjt:  MAFQGSSVFFNFSFFLLITLFPLISSSSPSNSHGLVFLNNLNGCKKGDKVEGIHQMKKYLHHFGYLDD-VHIH----DDEFDELLESAIKTYQINYNLKA

Query:  TGTLDTTTLAQMSKPRCGVADVIDGKTGMKSGKKGMNQHRKISGHFHEV
        TG LD TTLAQMSKPRCGVAD+IDGK+GMKSGK  +NQHRK SGHFH+V
Subjt:  TGTLDTTTLAQMSKPRCGVADVIDGKTGMKSGKKGMNQHRKISGHFHEV

XP_004142457.2 metalloendoproteinase 3-MMP [Cucumis sativus]2.2e-5475.84Show/hide
Query:  MAFQGSSVFFNFSFFLLITLFPLISSSSPSNSHGLVFLNNLNGCKKGDKVEGIHQMKKYLHHFGYL-DDVHIH----DDEFDELLESAIKTYQINYNLKA
        M FQG S+FF F+ FL+I+LFPLISSS P    GLVFL NL GCKKGDKVEGIHQMKKYL HFGYL +DVHI     DDEFDE+LE A+KTYQINYNLK 
Subjt:  MAFQGSSVFFNFSFFLLITLFPLISSSSPSNSHGLVFLNNLNGCKKGDKVEGIHQMKKYLHHFGYL-DDVHIH----DDEFDELLESAIKTYQINYNLKA

Query:  TGTLDTTTLAQMSKPRCGVADVIDGKTGMKSGKKGMNQHRKISGHFHEV
        TGTLD +TL QMSKPRCGVAD+I+GKT MKSGK+ +NQHRKISGHFHEV
Subjt:  TGTLDTTTLAQMSKPRCGVADVIDGKTGMKSGKKGMNQHRKISGHFHEV

XP_023551531.1 metalloendoproteinase 2-MMP-like [Cucurbita pepo subsp. pepo]6.3e-4974.5Show/hide
Query:  MAFQGSSVFFNFSFFLLITLFPLISSSSPSNSHGLVFLNNLNGCKKGDKVEGIHQMKKYLHHFGYLDD-VHIH----DDEFDELLESAIKTYQINYNLKA
        MA +G S  F FS  LL++LFPL SS     SHGLVF+NNL+GCKKGDKVEGI QMKKYL  FGYL+D  H+H    DDEFDELLESAIKTYQINYNLKA
Subjt:  MAFQGSSVFFNFSFFLLITLFPLISSSSPSNSHGLVFLNNLNGCKKGDKVEGIHQMKKYLHHFGYLDD-VHIH----DDEFDELLESAIKTYQINYNLKA

Query:  TGTLDTTTLAQMSKPRCGVADVIDGKTGMKSGKKGMNQHRKISGHFHEV
        TG LD TTLAQMSKPRCGVAD+IDGK+GMKSG   +NQHRK SGHFHEV
Subjt:  TGTLDTTTLAQMSKPRCGVADVIDGKTGMKSGKKGMNQHRKISGHFHEV

XP_038889209.1 metalloendoproteinase 2-MMP-like [Benincasa hispida]2.9e-5477.48Show/hide
Query:  MAFQGSSVFFNFSFFLLITLFPLISSSSPSN--SHGLVFLNNLNGCKKGDKVEGIHQMKKYLHHFGYLDDVHIH-----DDEFDELLESAIKTYQINYNL
        MAF+G S FF  SFFLLI +FPLISSS P+N  SHGLVFLNNL+GCKKGDKVEGIHQMK YL HFGYL+ V  H     DDEFDE+LESAIKTYQ+NYNL
Subjt:  MAFQGSSVFFNFSFFLLITLFPLISSSSPSN--SHGLVFLNNLNGCKKGDKVEGIHQMKKYLHHFGYLDDVHIH-----DDEFDELLESAIKTYQINYNL

Query:  KATGTLDTTTLAQMSKPRCGVADVIDGKTGMKSGKKGMNQHRKISGHFHEV
        KATGTLD TTLA MSKPRCG+ADV+DGKT MKSGKK +NQHRKI+GHFH V
Subjt:  KATGTLDTTTLAQMSKPRCGVADVIDGKTGMKSGKKGMNQHRKISGHFHEV

XP_038891009.1 metalloendoproteinase 2-MMP-like [Benincasa hispida]1.4e-5377.48Show/hide
Query:  MAFQGSSV-FFNFSFFLLITLFPLISSSSPS--NSHGLVFLNNLNGCKKGDKVEGIHQMKKYLHHFGYLDDVHIH----DDEFDELLESAIKTYQINYNL
        M FQ  S+ FF F+ FLLITLFP ISSS P   +SHGLVFL NL GCKKGDKVEGIHQMKKYLHHFGYL+DVHIH    +DEFDE+LESAIKTYQINYNL
Subjt:  MAFQGSSV-FFNFSFFLLITLFPLISSSSPS--NSHGLVFLNNLNGCKKGDKVEGIHQMKKYLHHFGYLDDVHIH----DDEFDELLESAIKTYQINYNL

Query:  KATGTLDTTTLAQMSKPRCGVADVIDGKTGMKSGKKGMNQHRKISGHFHEV
        KATGTLD TTLAQ+ K RCGVAD+I+GKT MKSG K +NQHRKISG FHEV
Subjt:  KATGTLDTTTLAQMSKPRCGVADVIDGKTGMKSGKKGMNQHRKISGHFHEV

TrEMBL top hitse value%identityAlignment
A0A0A0KS47 ZnMc domain-containing protein1.1e-5475.84Show/hide
Query:  MAFQGSSVFFNFSFFLLITLFPLISSSSPSNSHGLVFLNNLNGCKKGDKVEGIHQMKKYLHHFGYL-DDVHIH----DDEFDELLESAIKTYQINYNLKA
        M FQG S+FF F+ FL+I+LFPLISSS P    GLVFL NL GCKKGDKVEGIHQMKKYL HFGYL +DVHI     DDEFDE+LE A+KTYQINYNLK 
Subjt:  MAFQGSSVFFNFSFFLLITLFPLISSSSPSNSHGLVFLNNLNGCKKGDKVEGIHQMKKYLHHFGYL-DDVHIH----DDEFDELLESAIKTYQINYNLKA

Query:  TGTLDTTTLAQMSKPRCGVADVIDGKTGMKSGKKGMNQHRKISGHFHEV
        TGTLD +TL QMSKPRCGVAD+I+GKT MKSGK+ +NQHRKISGHFHEV
Subjt:  TGTLDTTTLAQMSKPRCGVADVIDGKTGMKSGKKGMNQHRKISGHFHEV

A0A0A0KU08 ZnMc domain-containing protein1.1e-4667.11Show/hide
Query:  MAFQGSSVFFNFSFFLLITLFPLISSSSPSN--SHGLVFLNNLNGCKKGDKVEGIHQMKKYLHHFGYLDDV------HIHDDEFDELLESAIKTYQINYN
        MAF+    F   SFFL+I LFPLISSS P +  S+GLVFL NLNGCKKGDKVEGIHQ+K+YL HFGYL++          DDEFD +LESAIKTYQ+NYN
Subjt:  MAFQGSSVFFNFSFFLLITLFPLISSSSPSN--SHGLVFLNNLNGCKKGDKVEGIHQMKKYLHHFGYLDDV------HIHDDEFDELLESAIKTYQINYN

Query:  LKATGTLDTTTLAQMSKPRCGVADVIDGKTGMKSGKKGMNQHRKISGHFHEV
        LKATGT++  TL  MS+PRCG AD++DGKT MKSGKK +NQHRKI+GHFH V
Subjt:  LKATGTLDTTTLAQMSKPRCGVADVIDGKTGMKSGKKGMNQHRKISGHFHEV

A0A1S3C9I6 metalloendoproteinase 2-MMP-like1.4e-4667.76Show/hide
Query:  MAFQGSSVFFNFSFFLLITLFPLISSSSPS--NSHGLVFLNNLNGCKKGDKVEGIHQMKKYLHHFGYLDDV------HIHDDEFDELLESAIKTYQINYN
        M F+    F   SFFL+I LFPLISSS P+  +S+GL FL NLNGC+KGDKV GIHQ+K+YL HFGYL++          DDEFD +LESAIKTYQ+NYN
Subjt:  MAFQGSSVFFNFSFFLLITLFPLISSSSPS--NSHGLVFLNNLNGCKKGDKVEGIHQMKKYLHHFGYLDDV------HIHDDEFDELLESAIKTYQINYN

Query:  LKATGTLDTTTLAQMSKPRCGVADVIDGKTGMKSGKKGMNQHRKISGHFHEV
        LKATGTLD  TL  MSKPRCGVAD+IDGKT MKSGKK +NQHRKI+GHFH V
Subjt:  LKATGTLDTTTLAQMSKPRCGVADVIDGKTGMKSGKKGMNQHRKISGHFHEV

A0A5D3BMC5 Metalloendoproteinase 2-MMP-like1.4e-4667.76Show/hide
Query:  MAFQGSSVFFNFSFFLLITLFPLISSSSPS--NSHGLVFLNNLNGCKKGDKVEGIHQMKKYLHHFGYLDDV------HIHDDEFDELLESAIKTYQINYN
        M F+    F   SFFL+I LFPLISSS P+  +S+GL FL NLNGC+KGDKV GIHQ+K+YL HFGYL++          DDEFD +LESAIKTYQ+NYN
Subjt:  MAFQGSSVFFNFSFFLLITLFPLISSSSPS--NSHGLVFLNNLNGCKKGDKVEGIHQMKKYLHHFGYLDDV------HIHDDEFDELLESAIKTYQINYN

Query:  LKATGTLDTTTLAQMSKPRCGVADVIDGKTGMKSGKKGMNQHRKISGHFHEV
        LKATGTLD  TL  MSKPRCGVAD+IDGKT MKSGKK +NQHRKI+GHFH V
Subjt:  LKATGTLDTTTLAQMSKPRCGVADVIDGKTGMKSGKKGMNQHRKISGHFHEV

A0A6J1JTF5 metalloendoproteinase 2-MMP-like2.0e-4872Show/hide
Query:  MAFQGSSVFFNFSFFLLITLFPLISSSS--PSNSHGLVFLNNLNGCKKGDKVEGIHQMKKYLHHFGYLDDVHIH----DDEFDELLESAIKTYQINYNLK
        MA   +  FF  S FLLITLFPLISSS   P++SHGL+FLNNLNGCKKGD VEG+HQMK+YL  FGYL  V  H    DDEFDELLESAI+TYQ+NYNL+
Subjt:  MAFQGSSVFFNFSFFLLITLFPLISSSS--PSNSHGLVFLNNLNGCKKGDKVEGIHQMKKYLHHFGYLDDVHIH----DDEFDELLESAIKTYQINYNLK

Query:  ATGTLDTTTLAQMSKPRCGVADVIDGKTGMKSGKKGMNQHRKISGHFHEV
        ATGTLD +TLA MSKPRCGVADV  GKTGM SGKK +N+HRKIS HFH V
Subjt:  ATGTLDTTTLAQMSKPRCGVADVIDGKTGMKSGKKGMNQHRKISGHFHEV

SwissProt top hitse value%identityAlignment
O04529 Metalloendoproteinase 2-MMP1.0e-1433.78Show/hide
Query:  VFFNFSFFLLIT-----LFPLISSSSPS-NSHGLVF---LNNLNGCKKGDKVEGIHQMKKYLHHFGYLDDVHIHD--DEFDELLESAIKTYQINYNLKAT
        VF   S FL+++      FP  ++  PS  +   VF    +N  GC  G  V+G++++KKY   FGY+ +    +  D+FD++L++A++ YQ N+NL  T
Subjt:  VFFNFSFFLLIT-----LFPLISSSSPS-NSHGLVF---LNNLNGCKKGDKVEGIHQMKKYLHHFGYLDDVHIHD--DEFDELLESAIKTYQINYNLKAT

Query:  GTLDTTTLAQMSKPRCGVADVIDGKTGMKSGKKGMNQHRKISGHFHEV
        G LD  T+  +  PRCG  DV++G + M  G++   +      H H V
Subjt:  GTLDTTTLAQMSKPRCGVADVIDGKTGMKSGKKGMNQHRKISGHFHEV

O23507 Metalloendoproteinase 1-MMP1.7e-1253.52Show/hide
Query:  GDKVEGIHQMKKYLHHFGYLDD-VHIHDDEFDELLESAIKTYQINYNLKATGTLDTTTLAQMSKPRCGVAD
        G  V G+ ++K+YLH FGY++D   I  D FD  LESAI  YQ N  L  TG LDT+T+  MS PRCGV+D
Subjt:  GDKVEGIHQMKKYLHHFGYLDD-VHIHDDEFDELLESAIKTYQINYNLKATGTLDTTTLAQMSKPRCGVAD

P29136 Metalloendoproteinase 14.0e-1440.57Show/hide
Query:  SFFLLITLFPLISSSSPSNSHGLVFLNNLNGCKKGDKVEGIHQMKKYLHHFGYLDDVHIHDDEFDELLESAIKTYQINYNLKATGTLDTTTLAQMSKPRC
        + + L T  P +S+  P    G            G   +G+  +K Y HH GY+ +    DD FD+ L SAIKTYQ NYNL  TG  D  TL Q+  PRC
Subjt:  SFFLLITLFPLISSSSPSNSHGLVFLNNLNGCKKGDKVEGIHQMKKYLHHFGYLDDVHIHDDEFDELLESAIKTYQINYNLKATGTLDTTTLAQMSKPRC

Query:  GVADVI
        GV D+I
Subjt:  GVADVI

Q5XF51 Metalloendoproteinase 3-MMP7.3e-1640.86Show/hide
Query:  NLNGCKKGDKVEGIHQMKKYLHHFGYLDDVHI---HDDEFDELLESAIKTYQINYNLKATGTLDTTTLAQMSKPRCGVADVIDGKTGMKSGKK
        N  GC  G K +G++ +K+Y  HFGY+ + ++     D+FD++L++A++ YQ N+ L  TG LD  TL  +  PRCG  DV++G + M SG+K
Subjt:  NLNGCKKGDKVEGIHQMKKYLHHFGYLDDVHI---HDDEFDELLESAIKTYQINYNLKATGTLDTTTLAQMSKPRCGVADVIDGKTGMKSGKK

Q9ZUJ5 Metalloendoproteinase 5-MMP4.5e-1847.78Show/hide
Query:  NNLNGCKKGDKVEGIHQMKKYLHHFGYLDDVHIHDDEFDELLESAIKTYQINYNLKATGTLDTTTLAQMSKPRCGVADVIDGKTGMKSGK
        + L GC  G+ + G+ ++K+Y   FGY+       D+FD++L+SAI TYQ N+NLK TG LD++TL Q+ KPRCG  D+IDG + M  GK
Subjt:  NNLNGCKKGDKVEGIHQMKKYLHHFGYLDDVHIHDDEFDELLESAIKTYQINYNLKATGTLDTTTLAQMSKPRCGVADVIDGKTGMKSGK

Arabidopsis top hitse value%identityAlignment
AT1G24140.1 Matrixin family protein5.2e-1740.86Show/hide
Query:  NLNGCKKGDKVEGIHQMKKYLHHFGYLDDVHI---HDDEFDELLESAIKTYQINYNLKATGTLDTTTLAQMSKPRCGVADVIDGKTGMKSGKK
        N  GC  G K +G++ +K+Y  HFGY+ + ++     D+FD++L++A++ YQ N+ L  TG LD  TL  +  PRCG  DV++G + M SG+K
Subjt:  NLNGCKKGDKVEGIHQMKKYLHHFGYLDDVHI---HDDEFDELLESAIKTYQINYNLKATGTLDTTTLAQMSKPRCGVADVIDGKTGMKSGKK

AT1G59970.1 Matrixin family protein3.2e-1947.78Show/hide
Query:  NNLNGCKKGDKVEGIHQMKKYLHHFGYLDDVHIHDDEFDELLESAIKTYQINYNLKATGTLDTTTLAQMSKPRCGVADVIDGKTGMKSGK
        + L GC  G+ + G+ ++K+Y   FGY+       D+FD++L+SAI TYQ N+NLK TG LD++TL Q+ KPRCG  D+IDG + M  GK
Subjt:  NNLNGCKKGDKVEGIHQMKKYLHHFGYLDDVHIHDDEFDELLESAIKTYQINYNLKATGTLDTTTLAQMSKPRCGVADVIDGKTGMKSGK

AT1G70170.1 matrix metalloproteinase7.4e-1633.78Show/hide
Query:  VFFNFSFFLLIT-----LFPLISSSSPS-NSHGLVF---LNNLNGCKKGDKVEGIHQMKKYLHHFGYLDDVHIHD--DEFDELLESAIKTYQINYNLKAT
        VF   S FL+++      FP  ++  PS  +   VF    +N  GC  G  V+G++++KKY   FGY+ +    +  D+FD++L++A++ YQ N+NL  T
Subjt:  VFFNFSFFLLIT-----LFPLISSSSPS-NSHGLVF---LNNLNGCKKGDKVEGIHQMKKYLHHFGYLDDVHIHD--DEFDELLESAIKTYQINYNLKAT

Query:  GTLDTTTLAQMSKPRCGVADVIDGKTGMKSGKKGMNQHRKISGHFHEV
        G LD  T+  +  PRCG  DV++G + M  G++   +      H H V
Subjt:  GTLDTTTLAQMSKPRCGVADVIDGKTGMKSGKKGMNQHRKISGHFHEV

AT2G45040.1 Matrixin family protein1.2e-0537.18Show/hide
Query:  IHQMKKYLHHFGYLDDVHIHDDEFDELLESAIKTYQINYNLKATGTLDTTTLAQMSKPRCGVADVIDGKTG-MKSGKK
        I ++K++L  +GYL     + +  D   E A+  YQ N  L  TG  D+ TL+Q+  PRCG  D ++ KT    +GKK
Subjt:  IHQMKKYLHHFGYLDDVHIHDDEFDELLESAIKTYQINYNLKATGTLDTTTLAQMSKPRCGVADVIDGKTG-MKSGKK

AT4G16640.1 Matrixin family protein1.2e-1353.52Show/hide
Query:  GDKVEGIHQMKKYLHHFGYLDD-VHIHDDEFDELLESAIKTYQINYNLKATGTLDTTTLAQMSKPRCGVAD
        G  V G+ ++K+YLH FGY++D   I  D FD  LESAI  YQ N  L  TG LDT+T+  MS PRCGV+D
Subjt:  GDKVEGIHQMKKYLHHFGYLDD-VHIHDDEFDELLESAIKTYQINYNLKATGTLDTTTLAQMSKPRCGVAD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATTTCAGGGATCATCAGTATTCTTCAATTTCTCTTTTTTTCTTCTAATTACTCTCTTCCCTTTAATATCATCTTCTTCTCCGTCAAATTCCCATGGATTGGTGTT
TCTGAACAACCTCAATGGATGCAAGAAGGGTGACAAAGTGGAAGGAATCCACCAAATGAAGAAATACCTTCACCATTTTGGTTATTTGGATGATGTTCATATTCATGATG
ATGAGTTTGACGAGCTCCTAGAGTCTGCCATCAAAACTTACCAAATCAACTACAATCTCAAGGCCACAGGAACTCTCGACACCACGACGCTGGCTCAAATGTCGAAACCT
CGATGCGGGGTTGCGGACGTCATCGACGGAAAAACTGGGATGAAATCAGGCAAGAAAGGGATGAATCAACATAGAAAGATCAGTGGTCATTTCCATGAAGTTTTGTTAAA
ATTAATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCATTTCAGGGATCATCAGTATTCTTCAATTTCTCTTTTTTTCTTCTAATTACTCTCTTCCCTTTAATATCATCTTCTTCTCCGTCAAATTCCCATGGATTGGTGTT
TCTGAACAACCTCAATGGATGCAAGAAGGGTGACAAAGTGGAAGGAATCCACCAAATGAAGAAATACCTTCACCATTTTGGTTATTTGGATGATGTTCATATTCATGATG
ATGAGTTTGACGAGCTCCTAGAGTCTGCCATCAAAACTTACCAAATCAACTACAATCTCAAGGCCACAGGAACTCTCGACACCACGACGCTGGCTCAAATGTCGAAACCT
CGATGCGGGGTTGCGGACGTCATCGACGGAAAAACTGGGATGAAATCAGGCAAGAAAGGGATGAATCAACATAGAAAGATCAGTGGTCATTTCCATGAAGTTTTGTTAAA
ATTAATCTAG
Protein sequenceShow/hide protein sequence
MAFQGSSVFFNFSFFLLITLFPLISSSSPSNSHGLVFLNNLNGCKKGDKVEGIHQMKKYLHHFGYLDDVHIHDDEFDELLESAIKTYQINYNLKATGTLDTTTLAQMSKP
RCGVADVIDGKTGMKSGKKGMNQHRKISGHFHEVLLKLI