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Lag0030091 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0030091
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionKeratin, type II cytoskeletal 1-like
Genome locationchr8:44510048..44510407
RNA-Seq ExpressionLag0030091
SyntenyLag0030091
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048297.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.2e-1547.37Show/hide
Query:  SSQNLKVVNSGNKITTLKLDEDNFLLWKLQVLTVLRGHGLKKYIEEDPDVPPKFISSNDSS--SSTKIPNPAHDHWVRQDSLITAWLLGSMSNSL
        SS   ++  SGNKI+ +KL++D FLLWK Q+LT L  + L+ ++E + + P K++ S +SS  S+T  PNPA+  W RQD LI++WLLGSMS  +
Subjt:  SSQNLKVVNSGNKITTLKLDEDNFLLWKLQVLTVLRGHGLKKYIEEDPDVPPKFISSNDSS--SSTKIPNPAHDHWVRQDSLITAWLLGSMSNSL

KAA0067213.1 keratin, type II cytoskeletal 1-like [Cucumis melo var. makuwa]3.6e-1546.32Show/hide
Query:  SSQNLKVVNSGNKITTLKLDEDNFLLWKLQVLTVLRGHGLKKYIEEDPDVPPKFISSNDSS--SSTKIPNPAHDHWVRQDSLITAWLLGSMSNSL
        SS   ++  S NKI+ +KL +DNFLLWK Q+LT L  + L+ ++E + + P K++ S  SS  S+T+ PNP +  W RQD LI++WLLGSMS  +
Subjt:  SSQNLKVVNSGNKITTLKLDEDNFLLWKLQVLTVLRGHGLKKYIEEDPDVPPKFISSNDSS--SSTKIPNPAHDHWVRQDSLITAWLLGSMSNSL

TYK10642.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.2e-1547.37Show/hide
Query:  SSQNLKVVNSGNKITTLKLDEDNFLLWKLQVLTVLRGHGLKKYIEEDPDVPPKFISSNDSS--SSTKIPNPAHDHWVRQDSLITAWLLGSMSNSL
        SS   ++  SGNKI+ +KL++D FLLWK Q+LT L  + L+ ++E + + P K++ S +SS  S+T  PNPA+  W RQD LI++WLLGSMS  +
Subjt:  SSQNLKVVNSGNKITTLKLDEDNFLLWKLQVLTVLRGHGLKKYIEEDPDVPPKFISSNDSS--SSTKIPNPAHDHWVRQDSLITAWLLGSMSNSL

XP_022154487.1 uncharacterized protein LOC111021757 [Momordica charantia]1.5e-1643.56Show/hide
Query:  SSDVLNSSQNLKVVNSGNKITTLKLDEDNFLLWKLQVLTVLRGHGLKKYIEEDPDVPPKFI--SSNDSSSSTKIPNPAHDHWVRQDSLITAWLLGSMSNS
        +SD     Q  K +N G+K++ ++L++DN LLWK Q+ T L+G+GL+ YI+ + D P +F+  + ++SSSS+   NPA+  W++QD LI+AWLLGSM+  
Subjt:  SSDVLNSSQNLKVVNSGNKITTLKLDEDNFLLWKLQVLTVLRGHGLKKYIEEDPDVPPKFI--SSNDSSSSTKIPNPAHDHWVRQDSLITAWLLGSMSNS

Query:  L
        +
Subjt:  L

XP_022159146.1 uncharacterized protein LOC111025572 [Momordica charantia]1.5e-2151.49Show/hide
Query:  ASSSDVLNSSQNLKVVNSGNKITTLKLDEDNFLLWKLQVLTVLRGHGLKKYIEEDPDVPPKFISSNDSSSSTKIPNPAHDHWVRQDSLITAWLLGSMSNS
        +S +D    +QN  +VN GNKI+T+KL+++NFLLW+LQ+ T L+GHGL K+I+ +  +P +F+ S D SSS   PNP   +W RQD LIT+WLLGSMS  
Subjt:  ASSSDVLNSSQNLKVVNSGNKITTLKLDEDNFLLWKLQVLTVLRGHGLKKYIEEDPDVPPKFISSNDSSSSTKIPNPAHDHWVRQDSLITAWLLGSMSNS

Query:  L
        +
Subjt:  L

TrEMBL top hitse value%identityAlignment
A0A5A7U233 Retrovirus-related Pol polyprotein from transposon TNT 1-946.0e-1647.37Show/hide
Query:  SSQNLKVVNSGNKITTLKLDEDNFLLWKLQVLTVLRGHGLKKYIEEDPDVPPKFISSNDSS--SSTKIPNPAHDHWVRQDSLITAWLLGSMSNSL
        SS   ++  SGNKI+ +KL++D FLLWK Q+LT L  + L+ ++E + + P K++ S +SS  S+T  PNPA+  W RQD LI++WLLGSMS  +
Subjt:  SSQNLKVVNSGNKITTLKLDEDNFLLWKLQVLTVLRGHGLKKYIEEDPDVPPKFISSNDSS--SSTKIPNPAHDHWVRQDSLITAWLLGSMSNSL

A0A5D3CH97 Retrovirus-related Pol polyprotein from transposon TNT 1-946.0e-1647.37Show/hide
Query:  SSQNLKVVNSGNKITTLKLDEDNFLLWKLQVLTVLRGHGLKKYIEEDPDVPPKFISSNDSS--SSTKIPNPAHDHWVRQDSLITAWLLGSMSNSL
        SS   ++  SGNKI+ +KL++D FLLWK Q+LT L  + L+ ++E + + P K++ S +SS  S+T  PNPA+  W RQD LI++WLLGSMS  +
Subjt:  SSQNLKVVNSGNKITTLKLDEDNFLLWKLQVLTVLRGHGLKKYIEEDPDVPPKFISSNDSS--SSTKIPNPAHDHWVRQDSLITAWLLGSMSNSL

A0A5D3D5T2 Keratin, type II cytoskeletal 1-like1.7e-1546.32Show/hide
Query:  SSQNLKVVNSGNKITTLKLDEDNFLLWKLQVLTVLRGHGLKKYIEEDPDVPPKFISSNDSS--SSTKIPNPAHDHWVRQDSLITAWLLGSMSNSL
        SS   ++  S NKI+ +KL +DNFLLWK Q+LT L  + L+ ++E + + P K++ S  SS  S+T+ PNP +  W RQD LI++WLLGSMS  +
Subjt:  SSQNLKVVNSGNKITTLKLDEDNFLLWKLQVLTVLRGHGLKKYIEEDPDVPPKFISSNDSS--SSTKIPNPAHDHWVRQDSLITAWLLGSMSNSL

A0A6J1DLT9 uncharacterized protein LOC1110217577.1e-1743.56Show/hide
Query:  SSDVLNSSQNLKVVNSGNKITTLKLDEDNFLLWKLQVLTVLRGHGLKKYIEEDPDVPPKFI--SSNDSSSSTKIPNPAHDHWVRQDSLITAWLLGSMSNS
        +SD     Q  K +N G+K++ ++L++DN LLWK Q+ T L+G+GL+ YI+ + D P +F+  + ++SSSS+   NPA+  W++QD LI+AWLLGSM+  
Subjt:  SSDVLNSSQNLKVVNSGNKITTLKLDEDNFLLWKLQVLTVLRGHGLKKYIEEDPDVPPKFI--SSNDSSSSTKIPNPAHDHWVRQDSLITAWLLGSMSNS

Query:  L
        +
Subjt:  L

A0A6J1E314 uncharacterized protein LOC1110255727.3e-2251.49Show/hide
Query:  ASSSDVLNSSQNLKVVNSGNKITTLKLDEDNFLLWKLQVLTVLRGHGLKKYIEEDPDVPPKFISSNDSSSSTKIPNPAHDHWVRQDSLITAWLLGSMSNS
        +S +D    +QN  +VN GNKI+T+KL+++NFLLW+LQ+ T L+GHGL K+I+ +  +P +F+ S D SSS   PNP   +W RQD LIT+WLLGSMS  
Subjt:  ASSSDVLNSSQNLKVVNSGNKITTLKLDEDNFLLWKLQVLTVLRGHGLKKYIEEDPDVPPKFISSNDSSSSTKIPNPAHDHWVRQDSLITAWLLGSMSNS

Query:  L
        +
Subjt:  L

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATCCTTCTCCAGAAGCGAGCAGCTCAGATGTTCTAAATTCATCTCAGAATTTGAAGGTGGTGAACTCTGGTAACAAAATCACTACACTAAAACTTGATGAAGA
TAACTTCTTACTGTGGAAATTACAAGTTCTCACGGTCCTACGCGGTCATGGTCTGAAGAAATACATTGAAGAAGATCCTGATGTTCCTCCAAAATTCATTTCGTCCAATG
ATTCTTCTTCATCGACAAAAATTCCCAATCCCGCCCATGATCACTGGGTCCGTCAAGACAGCTTAATTACAGCATGGTTGCTCGGTTCCATGTCCAATTCTTTAACCTTT
CATTATACACTTATCAAGGAGCCAACGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGATCCTTCTCCAGAAGCGAGCAGCTCAGATGTTCTAAATTCATCTCAGAATTTGAAGGTGGTGAACTCTGGTAACAAAATCACTACACTAAAACTTGATGAAGA
TAACTTCTTACTGTGGAAATTACAAGTTCTCACGGTCCTACGCGGTCATGGTCTGAAGAAATACATTGAAGAAGATCCTGATGTTCCTCCAAAATTCATTTCGTCCAATG
ATTCTTCTTCATCGACAAAAATTCCCAATCCCGCCCATGATCACTGGGTCCGTCAAGACAGCTTAATTACAGCATGGTTGCTCGGTTCCATGTCCAATTCTTTAACCTTT
CATTATACACTTATCAAGGAGCCAACGTGA
Protein sequenceShow/hide protein sequence
MDDPSPEASSSDVLNSSQNLKVVNSGNKITTLKLDEDNFLLWKLQVLTVLRGHGLKKYIEEDPDVPPKFISSNDSSSSTKIPNPAHDHWVRQDSLITAWLLGSMSNSLTF
HYTLIKEPT