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Lag0030127 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0030127
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionBHLH domain-containing protein
Genome locationchr8:44797544..44798140
RNA-Seq ExpressionLag0030127
SyntenyLag0030127
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146688.1 transcription factor bHLH82 [Cucumis sativus]7.2e-6986.54Show/hide
Query:  MQPCSREMQTLNTLLNHSQISLQDLHADTHHHHHLNPPPPPSQQIPPSQLHHFDPAVASHDDFLEQMLNTIPSCSWPDLNPSNPKSPWDLNPINKPHRDI
        MQPCSREMQ+LN+LLNHSQISLQDLHAD    HHLNPPPP   QIPPS  HHFDP+ AS+DDFLEQMLNTIPSCSWPDLNPSNPKSPWDLNPINKP RDI
Subjt:  MQPCSREMQTLNTLLNHSQISLQDLHADTHHHHHLNPPPPPSQQIPPSQLHHFDPAVASHDDFLEQMLNTIPSCSWPDLNPSNPKSPWDLNPINKPHRDI

Query:  SDDPHQNQINATSPAAKAAVMLQQQLLLSRGISSAAGNGVADHGLPPMPLSLGNAD
        SDDPHQN + ATSPAAKAAVMLQQQLLLSRG+S +AGNGVADHGLPPMPLSLGNAD
Subjt:  SDDPHQNQINATSPAAKAAVMLQQQLLLSRGISSAAGNGVADHGLPPMPLSLGNAD

XP_008443870.1 PREDICTED: transcription factor bHLH82 [Cucumis melo]7.2e-6986.54Show/hide
Query:  MQPCSREMQTLNTLLNHSQISLQDLHADTHHHHHLNPPPPPSQQIPPSQLHHFDPAVASHDDFLEQMLNTIPSCSWPDLNPSNPKSPWDLNPINKPHRDI
        MQPCSREMQ+LN+LLNHSQISLQDLHAD    HHLNPPPP   QIPPS  HHFDP+ AS+DDFLEQMLNTIPSCSWPDLNPSNPKSPWDLNPINKP RDI
Subjt:  MQPCSREMQTLNTLLNHSQISLQDLHADTHHHHHLNPPPPPSQQIPPSQLHHFDPAVASHDDFLEQMLNTIPSCSWPDLNPSNPKSPWDLNPINKPHRDI

Query:  SDDPHQNQINATSPAAKAAVMLQQQLLLSRGISSAAGNGVADHGLPPMPLSLGNAD
        SDDPHQN + ATSPAAKAAVMLQQQLLLSRG+S +AGNGVADHGLPPMPLSLGNAD
Subjt:  SDDPHQNQINATSPAAKAAVMLQQQLLLSRGISSAAGNGVADHGLPPMPLSLGNAD

XP_022921826.1 transcription factor bHLH82-like [Cucurbita moschata]5.2e-6787.26Show/hide
Query:  MQPCSREMQTLNTLLNHSQISLQDLHADTHHHHHLNPPPPPSQQIPPSQLHHFDP-AVASHDDFLEQMLNTIPSCSWPDLNPSNPKSPWDLNPINKPHRD
        MQPCSREMQT N+LLNHSQISLQDLHAD    HHLNPPPP   QIP SQLHHFDP A ASHDDFLEQMLNTIPSCSWPDLNPSNPKSPWDLNPINKP RD
Subjt:  MQPCSREMQTLNTLLNHSQISLQDLHADTHHHHHLNPPPPPSQQIPPSQLHHFDP-AVASHDDFLEQMLNTIPSCSWPDLNPSNPKSPWDLNPINKPHRD

Query:  ISDDPHQNQINATSPAAKAAVMLQQQLLLSRGISSAAGNGVADHGLPPMPLSLGNAD
        ISDD HQ+ I ATSPAAKAAVMLQQQLLL+RGIS +AGNGVADHGLPPMPLSLGNAD
Subjt:  ISDDPHQNQINATSPAAKAAVMLQQQLLLSRGISSAAGNGVADHGLPPMPLSLGNAD

XP_022988583.1 transcription factor bHLH82-like [Cucurbita maxima]2.3e-6787.9Show/hide
Query:  MQPCSREMQTLNTLLNHSQISLQDLHADTHHHHHLNPPPPPSQQIPPSQLHHFDP-AVASHDDFLEQMLNTIPSCSWPDLNPSNPKSPWDLNPINKPHRD
        MQPCSREMQT N+LLNHSQISLQDLHAD    HHLNPPPP   QIP SQLHHFDP A ASHDDFLEQMLNTIPSCSWPDLNPSNPKSPWDLNPINKP RD
Subjt:  MQPCSREMQTLNTLLNHSQISLQDLHADTHHHHHLNPPPPPSQQIPPSQLHHFDP-AVASHDDFLEQMLNTIPSCSWPDLNPSNPKSPWDLNPINKPHRD

Query:  ISDDPHQNQINATSPAAKAAVMLQQQLLLSRGISSAAGNGVADHGLPPMPLSLGNAD
        ISDD HQN I ATSPAAKAAVMLQQQLLL+RGIS +AGNGVADHGLPPMPLSLGNAD
Subjt:  ISDDPHQNQINATSPAAKAAVMLQQQLLLSRGISSAAGNGVADHGLPPMPLSLGNAD

XP_038880051.1 bHLH transcription factor RHL1-like [Benincasa hispida]1.7e-7088.82Show/hide
Query:  MQPCSREMQTLNTLLNHSQISLQDLHADTHHH--HHLNPPPPPSQQIPPSQLHHFDP--AVASHDDFLEQMLNTIPSCSWPDLNP-SNPKSPWDLNPINK
        MQPCSREMQTLN+LL+HSQISLQDLHAD HHH  HHLNPPPP   QIPPS LHHFDP  A ASHDDFLEQMLNTIPSCSWPDLNP SNPKSPWDLNPINK
Subjt:  MQPCSREMQTLNTLLNHSQISLQDLHADTHHH--HHLNPPPPPSQQIPPSQLHHFDP--AVASHDDFLEQMLNTIPSCSWPDLNP-SNPKSPWDLNPINK

Query:  PHRDISDDPHQNQINATSPAAKAAVMLQQQLLLSRGISSAAGNGVADHGLPPMPLSLGNAD
        P RDISDDPHQN I ATSPAAKAAVMLQQQLLLSRGIS +AGNGVADHGLPPMPLSLGNAD
Subjt:  PHRDISDDPHQNQINATSPAAKAAVMLQQQLLLSRGISSAAGNGVADHGLPPMPLSLGNAD

TrEMBL top hitse value%identityAlignment
A0A0A0LWM2 BHLH domain-containing protein3.5e-6986.54Show/hide
Query:  MQPCSREMQTLNTLLNHSQISLQDLHADTHHHHHLNPPPPPSQQIPPSQLHHFDPAVASHDDFLEQMLNTIPSCSWPDLNPSNPKSPWDLNPINKPHRDI
        MQPCSREMQ+LN+LLNHSQISLQDLHAD    HHLNPPPP   QIPPS  HHFDP+ AS+DDFLEQMLNTIPSCSWPDLNPSNPKSPWDLNPINKP RDI
Subjt:  MQPCSREMQTLNTLLNHSQISLQDLHADTHHHHHLNPPPPPSQQIPPSQLHHFDPAVASHDDFLEQMLNTIPSCSWPDLNPSNPKSPWDLNPINKPHRDI

Query:  SDDPHQNQINATSPAAKAAVMLQQQLLLSRGISSAAGNGVADHGLPPMPLSLGNAD
        SDDPHQN + ATSPAAKAAVMLQQQLLLSRG+S +AGNGVADHGLPPMPLSLGNAD
Subjt:  SDDPHQNQINATSPAAKAAVMLQQQLLLSRGISSAAGNGVADHGLPPMPLSLGNAD

A0A1S3B943 transcription factor bHLH823.5e-6986.54Show/hide
Query:  MQPCSREMQTLNTLLNHSQISLQDLHADTHHHHHLNPPPPPSQQIPPSQLHHFDPAVASHDDFLEQMLNTIPSCSWPDLNPSNPKSPWDLNPINKPHRDI
        MQPCSREMQ+LN+LLNHSQISLQDLHAD    HHLNPPPP   QIPPS  HHFDP+ AS+DDFLEQMLNTIPSCSWPDLNPSNPKSPWDLNPINKP RDI
Subjt:  MQPCSREMQTLNTLLNHSQISLQDLHADTHHHHHLNPPPPPSQQIPPSQLHHFDPAVASHDDFLEQMLNTIPSCSWPDLNPSNPKSPWDLNPINKPHRDI

Query:  SDDPHQNQINATSPAAKAAVMLQQQLLLSRGISSAAGNGVADHGLPPMPLSLGNAD
        SDDPHQN + ATSPAAKAAVMLQQQLLLSRG+S +AGNGVADHGLPPMPLSLGNAD
Subjt:  SDDPHQNQINATSPAAKAAVMLQQQLLLSRGISSAAGNGVADHGLPPMPLSLGNAD

A0A5A7T129 Transcription factor bHLH821.2e-6485.91Show/hide
Query:  MQTLNTLLNHSQISLQDLHADTHHHHHLNPPPPPSQQIPPSQLHHFDPAVASHDDFLEQMLNTIPSCSWPDLNPSNPKSPWDLNPINKPHRDISDDPHQN
        MQ+LN+LLNHSQISLQDLHAD    HHLNPPPP   QIPPS  HHFDP+ AS+DDFLEQMLNTIPSCSWPDLNPSNPKSPWDLNPINKP RDISDDPHQN
Subjt:  MQTLNTLLNHSQISLQDLHADTHHHHHLNPPPPPSQQIPPSQLHHFDPAVASHDDFLEQMLNTIPSCSWPDLNPSNPKSPWDLNPINKPHRDISDDPHQN

Query:  QINATSPAAKAAVMLQQQLLLSRGISSAAGNGVADHGLPPMPLSLGNAD
         + ATSPAAKAAVMLQQQLLLSRG+S +AGNGVADHGLPPMPLSLGNAD
Subjt:  QINATSPAAKAAVMLQQQLLLSRGISSAAGNGVADHGLPPMPLSLGNAD

A0A6J1E2F8 transcription factor bHLH82-like2.5e-6787.26Show/hide
Query:  MQPCSREMQTLNTLLNHSQISLQDLHADTHHHHHLNPPPPPSQQIPPSQLHHFDP-AVASHDDFLEQMLNTIPSCSWPDLNPSNPKSPWDLNPINKPHRD
        MQPCSREMQT N+LLNHSQISLQDLHAD    HHLNPPPP   QIP SQLHHFDP A ASHDDFLEQMLNTIPSCSWPDLNPSNPKSPWDLNPINKP RD
Subjt:  MQPCSREMQTLNTLLNHSQISLQDLHADTHHHHHLNPPPPPSQQIPPSQLHHFDP-AVASHDDFLEQMLNTIPSCSWPDLNPSNPKSPWDLNPINKPHRD

Query:  ISDDPHQNQINATSPAAKAAVMLQQQLLLSRGISSAAGNGVADHGLPPMPLSLGNAD
        ISDD HQ+ I ATSPAAKAAVMLQQQLLL+RGIS +AGNGVADHGLPPMPLSLGNAD
Subjt:  ISDDPHQNQINATSPAAKAAVMLQQQLLLSRGISSAAGNGVADHGLPPMPLSLGNAD

A0A6J1JMQ3 transcription factor bHLH82-like1.1e-6787.9Show/hide
Query:  MQPCSREMQTLNTLLNHSQISLQDLHADTHHHHHLNPPPPPSQQIPPSQLHHFDP-AVASHDDFLEQMLNTIPSCSWPDLNPSNPKSPWDLNPINKPHRD
        MQPCSREMQT N+LLNHSQISLQDLHAD    HHLNPPPP   QIP SQLHHFDP A ASHDDFLEQMLNTIPSCSWPDLNPSNPKSPWDLNPINKP RD
Subjt:  MQPCSREMQTLNTLLNHSQISLQDLHADTHHHHHLNPPPPPSQQIPPSQLHHFDP-AVASHDDFLEQMLNTIPSCSWPDLNPSNPKSPWDLNPINKPHRD

Query:  ISDDPHQNQINATSPAAKAAVMLQQQLLLSRGISSAAGNGVADHGLPPMPLSLGNAD
        ISDD HQN I ATSPAAKAAVMLQQQLLL+RGIS +AGNGVADHGLPPMPLSLGNAD
Subjt:  ISDDPHQNQINATSPAAKAAVMLQQQLLLSRGISSAAGNGVADHGLPPMPLSLGNAD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACCCTGTAGCAGAGAAATGCAAACCTTAAACACTCTCTTAAACCACTCCCAAATCTCCCTCCAGGATCTCCACGCCGATACCCACCACCACCACCACCTGAATCC
GCCCCCGCCGCCGTCGCAGCAGATCCCGCCGTCTCAGCTCCACCATTTCGATCCGGCCGTCGCCTCCCACGACGACTTCCTCGAGCAAATGCTCAATACAATCCCTTCCT
GTTCGTGGCCGGACCTCAACCCTTCAAACCCTAAATCCCCTTGGGACCTCAACCCCATCAATAAGCCGCACAGAGATATCTCTGATGACCCCCACCAGAACCAGATCAAC
GCCACCTCTCCCGCCGCCAAGGCCGCCGTCATGCTCCAGCAACAGCTTCTCTTGTCCAGAGGCATCTCCTCCGCCGCCGGAAATGGCGTCGCTGACCATGGCCTCCCCCC
CATGCCTCTCTCCCTCGGAAATGCCGACTCTCCTTTCCCCTTCTCACCGCCACCGCCCTTCTTCTTCATCTCCCCCACCTCCGAACACCTACAGAGCATCAACAAAACTA
AGGAGGCGAGGGAGAGAGTGGAGGGCGATGGTCGGCGTCAGATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAACCCTGTAGCAGAGAAATGCAAACCTTAAACACTCTCTTAAACCACTCCCAAATCTCCCTCCAGGATCTCCACGCCGATACCCACCACCACCACCACCTGAATCC
GCCCCCGCCGCCGTCGCAGCAGATCCCGCCGTCTCAGCTCCACCATTTCGATCCGGCCGTCGCCTCCCACGACGACTTCCTCGAGCAAATGCTCAATACAATCCCTTCCT
GTTCGTGGCCGGACCTCAACCCTTCAAACCCTAAATCCCCTTGGGACCTCAACCCCATCAATAAGCCGCACAGAGATATCTCTGATGACCCCCACCAGAACCAGATCAAC
GCCACCTCTCCCGCCGCCAAGGCCGCCGTCATGCTCCAGCAACAGCTTCTCTTGTCCAGAGGCATCTCCTCCGCCGCCGGAAATGGCGTCGCTGACCATGGCCTCCCCCC
CATGCCTCTCTCCCTCGGAAATGCCGACTCTCCTTTCCCCTTCTCACCGCCACCGCCCTTCTTCTTCATCTCCCCCACCTCCGAACACCTACAGAGCATCAACAAAACTA
AGGAGGCGAGGGAGAGAGTGGAGGGCGATGGTCGGCGTCAGATCTAA
Protein sequenceShow/hide protein sequence
MQPCSREMQTLNTLLNHSQISLQDLHADTHHHHHLNPPPPPSQQIPPSQLHHFDPAVASHDDFLEQMLNTIPSCSWPDLNPSNPKSPWDLNPINKPHRDISDDPHQNQIN
ATSPAAKAAVMLQQQLLLSRGISSAAGNGVADHGLPPMPLSLGNADSPFPFSPPPPFFFISPTSEHLQSINKTKEARERVEGDGRRQI