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Lag0030141 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0030141
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr8:44887677..44888018
RNA-Seq ExpressionLag0030141
SyntenyLag0030141
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039430.1 hypothetical protein E6C27_scaffold64G002370 [Cucumis melo var. makuwa]1.1e-0539.45Show/hide
Query:  IIITILLSSNHCCCTASILTKANATYRCNAARNGGCFLIADAEARVEMILDTHMGRLLPFAGSGSAITDPTNNPSVQACGNGAGNPSGDCSGDPTNSNAC
        ++ITI  SS+   C  S+L KANATY              D     E+++   + R L F G   A T  TN+ +V ACGNGAGN    CSG  +N   C
Subjt:  IIITILLSSNHCCCTASILTKANATYRCNAARNGGCFLIADAEARVEMILDTHMGRLLPFAGSGSAITDPTNNPSVQACGNGAGNPSGDCSGDPTNSNAC

Query:  PIYQGPDAC
          Y+GP AC
Subjt:  PIYQGPDAC

KAG6578548.1 hypothetical protein SDJN03_22996, partial [Cucurbita argyrosperma subsp. sororia]1.4e-0840.18Show/hide
Query:  MATIIITILLSSNHCCCTASILTKANATYRCNAARNGGCFLIADAEARVEMILDTHMGRLLPFAGSGSAITDPTNNPSVQACGNGAGNPSGDCSGDPTNS
        +A +++TI+L S++    AS L +ANATY                E  VE+++   + R L F       TD T NP V++CGNG GNP GDCSG PTN 
Subjt:  MATIIITILLSSNHCCCTASILTKANATYRCNAARNGGCFLIADAEARVEMILDTHMGRLLPFAGSGSAITDPTNNPSVQACGNGAGNPSGDCSGDPTNS

Query:  NACPIYQGPDAC
          C  Y G  AC
Subjt:  NACPIYQGPDAC

KGN52519.1 hypothetical protein Csa_008872 [Cucumis sativus]1.9e-0533.93Show/hide
Query:  MATIIITILLSSNHCCCTASILTKANATYRCNAARNGGCFLIADAEARVEMILDTHMGRLLPFAGSGSAITDPTNNPSVQACGNGAGNPSGDCSGDPTNS
        +  ++++I + S+   C  SIL KANAT                +    E+I+   + R L F G+ +A+T  T +P++  CGNGAGN    C G+  N+
Subjt:  MATIIITILLSSNHCCCTASILTKANATYRCNAARNGGCFLIADAEARVEMILDTHMGRLLPFAGSGSAITDPTNNPSVQACGNGAGNPSGDCSGDPTNS

Query:  NACPIYQGPDAC
          C  YQGP+AC
Subjt:  NACPIYQGPDAC

TrEMBL top hitse value%identityAlignment
A0A0A0KUG7 Uncharacterized protein9.1e-0633.93Show/hide
Query:  MATIIITILLSSNHCCCTASILTKANATYRCNAARNGGCFLIADAEARVEMILDTHMGRLLPFAGSGSAITDPTNNPSVQACGNGAGNPSGDCSGDPTNS
        +  ++++I + S+   C  SIL KANAT                +    E+I+   + R L F G+ +A+T  T +P++  CGNGAGN    C G+  N+
Subjt:  MATIIITILLSSNHCCCTASILTKANATYRCNAARNGGCFLIADAEARVEMILDTHMGRLLPFAGSGSAITDPTNNPSVQACGNGAGNPSGDCSGDPTNS

Query:  NACPIYQGPDAC
          C  YQGP+AC
Subjt:  NACPIYQGPDAC

A0A0A0KVT8 Uncharacterized protein3.5e-0538.39Show/hide
Query:  MATIIITILLSSNHCCCTASILTKANATYRCNAARNGGCFLIADAEARVEMILDTHMGRLLPFAGSGSAITDPTNNPSVQACGNGAGNPSGDCSGDPTNS
        +  ++ITIL SS+   C  S+L KANATY              D     E+++   + R L  +GS  A T  T+  +V ACGNGAGN    C G  +N 
Subjt:  MATIIITILLSSNHCCCTASILTKANATYRCNAARNGGCFLIADAEARVEMILDTHMGRLLPFAGSGSAITDPTNNPSVQACGNGAGNPSGDCSGDPTNS

Query:  NACPIYQGPDAC
        N C  Y+GP+AC
Subjt:  NACPIYQGPDAC

A0A5D3BR80 Uncharacterized protein5.4e-0639.45Show/hide
Query:  IIITILLSSNHCCCTASILTKANATYRCNAARNGGCFLIADAEARVEMILDTHMGRLLPFAGSGSAITDPTNNPSVQACGNGAGNPSGDCSGDPTNSNAC
        ++ITI  SS+   C  S+L KANATY              D     E+++   + R L F G   A T  TN+ +V ACGNGAGN    CSG  +N   C
Subjt:  IIITILLSSNHCCCTASILTKANATYRCNAARNGGCFLIADAEARVEMILDTHMGRLLPFAGSGSAITDPTNNPSVQACGNGAGNPSGDCSGDPTNSNAC

Query:  PIYQGPDAC
          Y+GP AC
Subjt:  PIYQGPDAC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCATCATAATCACCATTCTCCTCTCTTCCAACCATTGTTGCTGCACAGCCTCCATTCTAACCAAGGCCAACGCCACCTACCGCTGCAATGCCGCCCGCAACGG
CGGATGTTTCCTCATCGCCGACGCCGAGGCGAGGGTGGAGATGATTCTAGATACCCACATGGGGCGGTTACTACCTTTCGCTGGTAGTGGGTCAGCCATAACAGACCCAA
CCAACAACCCTAGTGTGCAGGCTTGTGGTAACGGCGCTGGAAACCCTAGCGGAGACTGCAGTGGTGACCCCACTAATTCAAATGCCTGCCCAATATACCAGGGCCCCGAT
GCCTGCCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCACCATCATAATCACCATTCTCCTCTCTTCCAACCATTGTTGCTGCACAGCCTCCATTCTAACCAAGGCCAACGCCACCTACCGCTGCAATGCCGCCCGCAACGG
CGGATGTTTCCTCATCGCCGACGCCGAGGCGAGGGTGGAGATGATTCTAGATACCCACATGGGGCGGTTACTACCTTTCGCTGGTAGTGGGTCAGCCATAACAGACCCAA
CCAACAACCCTAGTGTGCAGGCTTGTGGTAACGGCGCTGGAAACCCTAGCGGAGACTGCAGTGGTGACCCCACTAATTCAAATGCCTGCCCAATATACCAGGGCCCCGAT
GCCTGCCATTAG
Protein sequenceShow/hide protein sequence
MATIIITILLSSNHCCCTASILTKANATYRCNAARNGGCFLIADAEARVEMILDTHMGRLLPFAGSGSAITDPTNNPSVQACGNGAGNPSGDCSGDPTNSNACPIYQGPD
ACH