CuGenDBv2

Gene ID	Lag0030244
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	cell wall protein RBR3-like isoform X2
Genome location	chr8:45723900..45726329
RNA-Seq Expression	Lag0030244
Synteny	Lag0030244
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022952551.1 uncharacterized protein LOC111455207 isoform X1 [Cucurbita moschata]

2.0e-65

63.57

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Query:  MESQKRNLRARKPLSDCTNTILSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSVPSESTSVNLQAPNPSSDFLPTEPSSNSPPAEPNPSSDSLF
        MESQKRNLR RKPL+DCTNT+LSSQS ASN SAAIKPRKRV+K AVKDV+NNEK+G SS+ S STSVNLQA NPSS+FLPT+PSSN PPAE NPSSDSL 
Subjt:  MESQKRNLRARKPLSDCTNTILSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSVPSESTSVNLQAPNPSSDFLPTEPSSNSPPAEPNPSSDSLF

Query:  TEPSSSSLPTEASTPSRRSDLPSSSGNRTFWYSFPCYDVGVWPLILLAGLLEQIVFPSPSHSTVEGTLRIKGR---------------AQRGESRDGYNS
        TEPSSSS+P E STPSR  DLPSSSG                         +++  P   +S      R K                   RGE R   +S
Subjt:  TEPSSSSLPTEASTPSRRSDLPSSSGNRTFWYSFPCYDVGVWPLILLAGLLEQIVFPSPSHSTVEGTLRIKGR---------------AQRGESRDGYNS

Query:  PSKARTVPYRKRQR-AIYGEDESKIELPREFVEQQKAYFSEVDAFELPVEEAKSSDSE
        PS+ARTVPYRKRQR  IYGEDESKIELPREFVE+QKAYFSEVDAFEL VEEAKSSDSE
Subjt:  PSKARTVPYRKRQR-AIYGEDESKIELPREFVEQQKAYFSEVDAFELPVEEAKSSDSE

XP_022991070.1 uncharacterized protein LOC111487776 isoform X1 [Cucurbita maxima]

7.0e-66

63.95

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Query:  MESQKRNLRARKPLSDCTNTILSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSVPSESTSVNLQAPNPSSDFLPTEPSSNSPPAEPNPSSDSLF
        MESQKRNLR RKPL+DCTNT+LSSQS ASN SAAIKPRKRV+KPAVKDV+NNEK+G SS  S STSVNLQA NPSSDFLPT+PSSN PPAE  P+SDSL 
Subjt:  MESQKRNLRARKPLSDCTNTILSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSVPSESTSVNLQAPNPSSDFLPTEPSSNSPPAEPNPSSDSLF

Query:  TEPSSSSLPTEASTPSRRSDLPSSSGNRTFWYSFPCYDVGVWPLILLAGLLEQIVFPSPSHSTVEGTLRIKGR---------------AQRGESRDGYNS
        TEPSSSSLP E STPSR  DLPSSSG                         +++  P   +S      R K                   RGE R   +S
Subjt:  TEPSSSSLPTEASTPSRRSDLPSSSGNRTFWYSFPCYDVGVWPLILLAGLLEQIVFPSPSHSTVEGTLRIKGR---------------AQRGESRDGYNS

Query:  PSKARTVPYRKRQR-AIYGEDESKIELPREFVEQQKAYFSEVDAFELPVEEAKSSDSE
        PS+ARTVPYRKRQR  IYGEDESKIELPREFVE+QKAYFSEVDAFEL VEEAKSSDSE
Subjt:  PSKARTVPYRKRQR-AIYGEDESKIELPREFVEQQKAYFSEVDAFELPVEEAKSSDSE

XP_022991071.1 cell wall protein RBR3-like isoform X2 [Cucurbita maxima]

7.0e-66

67.9

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Query:  MESQKRNLRARKPLSDCTNTILSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSVPSESTSVNLQAPNPSSDFLPTEPSSNSPPAEPNPSSDSLF
        MESQKRNLR RKPL+DCTNT+LSSQS ASN SAAIKPRKRV+KPAVKDV+NNEK+G SS  S STSVNLQA NPSSDFLPT+PSSN PPAE  P+SDSL 
Subjt:  MESQKRNLRARKPLSDCTNTILSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSVPSESTSVNLQAPNPSSDFLPTEPSSNSPPAEPNPSSDSLF

Query:  TEPSSSSLPTEASTPSRRSDLPSSSGNRTFWYSFPCYDVGVWPLILLAGLLEQIVFPSPSHSTVEGTLRIKGRAQRGESRDGYNSPSKARTVPYRKRQR-
        TEPSSSSLP E STPSR  DLPSSS       SF                    VF + S               RGE R   +SPS+ARTVPYRKRQR 
Subjt:  TEPSSSSLPTEASTPSRRSDLPSSSGNRTFWYSFPCYDVGVWPLILLAGLLEQIVFPSPSHSTVEGTLRIKGRAQRGESRDGYNSPSKARTVPYRKRQR-

Query:  AIYGEDESKIELPREFVEQQKAYFSEVDAFELPVEEAKSSDSE
         IYGEDESKIELPREFVE+QKAYFSEVDAFEL VEEAKSSDSE
Subjt:  AIYGEDESKIELPREFVEQQKAYFSEVDAFELPVEEAKSSDSE

XP_023515045.1 uncharacterized protein LOC111779162 isoform X1 [Cucurbita pepo subsp. pepo]

5.4e-66

64.34

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Query:  MESQKRNLRARKPLSDCTNTILSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSVPSESTSVNLQAPNPSSDFLPTEPSSNSPPAEPNPSSDSLF
        MESQKRNLR RKPL+DCTNT+LSSQS ASN SAAIKPRKRV+K AVKDVLNNEK+G SS  S STSVNLQA NPSS+FLPT+PSSN PPAE NPSSDSL 
Subjt:  MESQKRNLRARKPLSDCTNTILSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSVPSESTSVNLQAPNPSSDFLPTEPSSNSPPAEPNPSSDSLF

Query:  TEPSSSSLPTEASTPSRRSDLPSSSGNRTFWYSFPCYDVGVWPLILLAGLLEQIVFPSPSHSTVEGTLRIKGR---------------AQRGESRDGYNS
        TEPSSSS+P E STPSR  DLPSSSG                         +++  P   +S      R K                   RGE R   +S
Subjt:  TEPSSSSLPTEASTPSRRSDLPSSSGNRTFWYSFPCYDVGVWPLILLAGLLEQIVFPSPSHSTVEGTLRIKGR---------------AQRGESRDGYNS

Query:  PSKARTVPYRKRQR-AIYGEDESKIELPREFVEQQKAYFSEVDAFELPVEEAKSSDSE
        PS+ARTVPYRKRQR AIYGEDESKIELPREFVE+QKAYFSEVDAFEL VEEAKSSDSE
Subjt:  PSKARTVPYRKRQR-AIYGEDESKIELPREFVEQQKAYFSEVDAFELPVEEAKSSDSE

XP_023515126.1 uncharacterized protein LOC111779162 isoform X2 [Cucurbita pepo subsp. pepo]

7.0e-66

67.9

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Query:  MESQKRNLRARKPLSDCTNTILSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSVPSESTSVNLQAPNPSSDFLPTEPSSNSPPAEPNPSSDSLF
        MESQKRNLR RKPL+DCTNT+LSSQS ASN SAAIKPRKRV+K AVKDVLNNEK+G SS  S STSVNLQA NPSS+FLPT+PSSN PPAE NPSSDSL 
Subjt:  MESQKRNLRARKPLSDCTNTILSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSVPSESTSVNLQAPNPSSDFLPTEPSSNSPPAEPNPSSDSLF

Query:  TEPSSSSLPTEASTPSRRSDLPSSSGNRTFWYSFPCYDVGVWPLILLAGLLEQIVFPSPSHSTVEGTLRIKGRAQRGESRDGYNSPSKARTVPYRKRQR-
        TEPSSSS+P E STPSR  DLPSSS       SF                    +F + S               RGE R   +SPS+ARTVPYRKRQR 
Subjt:  TEPSSSSLPTEASTPSRRSDLPSSSGNRTFWYSFPCYDVGVWPLILLAGLLEQIVFPSPSHSTVEGTLRIKGRAQRGESRDGYNSPSKARTVPYRKRQR-

Query:  AIYGEDESKIELPREFVEQQKAYFSEVDAFELPVEEAKSSDSE
        AIYGEDESKIELPREFVE+QKAYFSEVDAFEL VEEAKSSDSE
Subjt:  AIYGEDESKIELPREFVEQQKAYFSEVDAFELPVEEAKSSDSE

TrEMBL top hits

e value

%identity

Alignment

A0A5A7U9W2 Vitellogenin-2 isoform X1

1.3e-62

64.03

Show/hide

Query:  MESQKRNLRARKPLSDCTNTILSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSVPSESTSVNLQAPNPSSDFLPTEPSSNSPPAEPNPSSDSLF
        MES KRNLRARKPL+DCTNTILSSQSPASNFSA+IKPRKRV K AVKDV NN+KKGE  + SESTSVNL+A NPSS+FLP EP+S+ PPAEPNPS DS  
Subjt:  MESQKRNLRARKPLSDCTNTILSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSVPSESTSVNLQAPNPSSDFLPTEPSSNSPPAEPNPSSDSLF

Query:  TEPSSSSLPTEASTPSRRSDLPSSSGNRTFWYSFPCYDVGVWPLILLAGLLEQIVF----PSPSHSTVEGTLR-----IKGRAQR-GESRDGYNSPSKAR
        +EPSSS  PTE STP R +DLPSSSG  T   S P                 Q V+    PS    +VE  L         + Q  G  RD  NSPSKAR
Subjt:  TEPSSSSLPTEASTPSRRSDLPSSSGNRTFWYSFPCYDVGVWPLILLAGLLEQIVF----PSPSHSTVEGTLR-----IKGRAQR-GESRDGYNSPSKAR

Query:  TVPYRKRQRA-IYGEDESKIELPREFVEQQKAYFSEVDAFELPVEEAKSSDSE
        TVP  KRQRA ++ ED+S +ELPREFVEQQK YFSEVDAFELPVEEAKSSDSE
Subjt:  TVPYRKRQRA-IYGEDESKIELPREFVEQQKAYFSEVDAFELPVEEAKSSDSE

A0A6J1GKJ2 uncharacterized protein LOC111455207 isoform X1

9.9e-66

63.57

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Query:  MESQKRNLRARKPLSDCTNTILSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSVPSESTSVNLQAPNPSSDFLPTEPSSNSPPAEPNPSSDSLF
        MESQKRNLR RKPL+DCTNT+LSSQS ASN SAAIKPRKRV+K AVKDV+NNEK+G SS+ S STSVNLQA NPSS+FLPT+PSSN PPAE NPSSDSL 
Subjt:  MESQKRNLRARKPLSDCTNTILSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSVPSESTSVNLQAPNPSSDFLPTEPSSNSPPAEPNPSSDSLF

Query:  TEPSSSSLPTEASTPSRRSDLPSSSGNRTFWYSFPCYDVGVWPLILLAGLLEQIVFPSPSHSTVEGTLRIKGR---------------AQRGESRDGYNS
        TEPSSSS+P E STPSR  DLPSSSG                         +++  P   +S      R K                   RGE R   +S
Subjt:  TEPSSSSLPTEASTPSRRSDLPSSSGNRTFWYSFPCYDVGVWPLILLAGLLEQIVFPSPSHSTVEGTLRIKGR---------------AQRGESRDGYNS

Query:  PSKARTVPYRKRQR-AIYGEDESKIELPREFVEQQKAYFSEVDAFELPVEEAKSSDSE
        PS+ARTVPYRKRQR  IYGEDESKIELPREFVE+QKAYFSEVDAFEL VEEAKSSDSE
Subjt:  PSKARTVPYRKRQR-AIYGEDESKIELPREFVEQQKAYFSEVDAFELPVEEAKSSDSE

A0A6J1GKK7 uncharacterized protein LOC111455207 isoform X2

2.2e-65

67.08

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Query:  MESQKRNLRARKPLSDCTNTILSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSVPSESTSVNLQAPNPSSDFLPTEPSSNSPPAEPNPSSDSLF
        MESQKRNLR RKPL+DCTNT+LSSQS ASN SAAIKPRKRV+K AVKDV+NNEK+G SS+ S STSVNLQA NPSS+FLPT+PSSN PPAE NPSSDSL 
Subjt:  MESQKRNLRARKPLSDCTNTILSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSVPSESTSVNLQAPNPSSDFLPTEPSSNSPPAEPNPSSDSLF

Query:  TEPSSSSLPTEASTPSRRSDLPSSSGNRTFWYSFPCYDVGVWPLILLAGLLEQIVFPSPSHSTVEGTLRIKGRAQRGESRDGYNSPSKARTVPYRKRQR-
        TEPSSSS+P E STPSR  DLPSSS       SF                    +F + S               RGE R   +SPS+ARTVPYRKRQR 
Subjt:  TEPSSSSLPTEASTPSRRSDLPSSSGNRTFWYSFPCYDVGVWPLILLAGLLEQIVFPSPSHSTVEGTLRIKGRAQRGESRDGYNSPSKARTVPYRKRQR-

Query:  AIYGEDESKIELPREFVEQQKAYFSEVDAFELPVEEAKSSDSE
         IYGEDESKIELPREFVE+QKAYFSEVDAFEL VEEAKSSDSE
Subjt:  AIYGEDESKIELPREFVEQQKAYFSEVDAFELPVEEAKSSDSE

A0A6J1JPQ1 cell wall protein RBR3-like isoform X2

3.4e-66

67.9

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Query:  MESQKRNLRARKPLSDCTNTILSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSVPSESTSVNLQAPNPSSDFLPTEPSSNSPPAEPNPSSDSLF
        MESQKRNLR RKPL+DCTNT+LSSQS ASN SAAIKPRKRV+KPAVKDV+NNEK+G SS  S STSVNLQA NPSSDFLPT+PSSN PPAE  P+SDSL 
Subjt:  MESQKRNLRARKPLSDCTNTILSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSVPSESTSVNLQAPNPSSDFLPTEPSSNSPPAEPNPSSDSLF

Query:  TEPSSSSLPTEASTPSRRSDLPSSSGNRTFWYSFPCYDVGVWPLILLAGLLEQIVFPSPSHSTVEGTLRIKGRAQRGESRDGYNSPSKARTVPYRKRQR-
        TEPSSSSLP E STPSR  DLPSSS       SF                    VF + S               RGE R   +SPS+ARTVPYRKRQR 
Subjt:  TEPSSSSLPTEASTPSRRSDLPSSSGNRTFWYSFPCYDVGVWPLILLAGLLEQIVFPSPSHSTVEGTLRIKGRAQRGESRDGYNSPSKARTVPYRKRQR-

Query:  AIYGEDESKIELPREFVEQQKAYFSEVDAFELPVEEAKSSDSE
         IYGEDESKIELPREFVE+QKAYFSEVDAFEL VEEAKSSDSE
Subjt:  AIYGEDESKIELPREFVEQQKAYFSEVDAFELPVEEAKSSDSE

A0A6J1JRU8 uncharacterized protein LOC111487776 isoform X1

3.4e-66

63.95

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Query:  MESQKRNLRARKPLSDCTNTILSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSVPSESTSVNLQAPNPSSDFLPTEPSSNSPPAEPNPSSDSLF
        MESQKRNLR RKPL+DCTNT+LSSQS ASN SAAIKPRKRV+KPAVKDV+NNEK+G SS  S STSVNLQA NPSSDFLPT+PSSN PPAE  P+SDSL 
Subjt:  MESQKRNLRARKPLSDCTNTILSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSVPSESTSVNLQAPNPSSDFLPTEPSSNSPPAEPNPSSDSLF

Query:  TEPSSSSLPTEASTPSRRSDLPSSSGNRTFWYSFPCYDVGVWPLILLAGLLEQIVFPSPSHSTVEGTLRIKGR---------------AQRGESRDGYNS
        TEPSSSSLP E STPSR  DLPSSSG                         +++  P   +S      R K                   RGE R   +S
Subjt:  TEPSSSSLPTEASTPSRRSDLPSSSGNRTFWYSFPCYDVGVWPLILLAGLLEQIVFPSPSHSTVEGTLRIKGR---------------AQRGESRDGYNS

Query:  PSKARTVPYRKRQR-AIYGEDESKIELPREFVEQQKAYFSEVDAFELPVEEAKSSDSE
        PS+ARTVPYRKRQR  IYGEDESKIELPREFVE+QKAYFSEVDAFEL VEEAKSSDSE
Subjt:  PSKARTVPYRKRQR-AIYGEDESKIELPREFVEQQKAYFSEVDAFELPVEEAKSSDSE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G56250.1 unknown protein

4.2e-08

27.43

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Query:  RKPLSDCTNTI-LSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSVPSESTSVNLQAPNPSSDFLPTEPSSNSPPAEPNPSSDSLFTEPSSSSLP
        RKPL+DCTNT+  SSQ  +S+   A       +K  V+     EK     V + +T+  + +   ++D  P                    T   S+ L 
Subjt:  RKPLSDCTNTI-LSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSVPSESTSVNLQAPNPSSDFLPTEPSSNSPPAEPNPSSDSLFTEPSSSSLP

Query:  TEASTPSRRSDLPSSSGNRTFWYSFPCYDVGVWPLILLAGLLEQIVFPSPSHSTVEGTLRIK---GRAQRGESRDGYNSPSKARTVPYRKRQRAIYGEDE
        + AS PSR     S  G     ++ P      W +  +            + S+     RI+     +   ++R    +  K   V  +KRQR +  E E
Subjt:  TEASTPSRRSDLPSSSGNRTFWYSFPCYDVGVWPLILLAGLLEQIVFPSPSHSTVEGTLRIK---GRAQRGESRDGYNSPSKARTVPYRKRQRAIYGEDE

Query:  SKIELP-REFVEQQKAYFSEVDAFELPVEEAKSSDSE
          +    ++++E+QKAYF+E+DAFELPVEE  +SDS+
Subjt:  SKIELP-REFVEQQKAYFSEVDAFELPVEEAKSSDSE

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAATCCCAGAAACGAAATCTCAGAGCTCGAAAACCCCTCTCTGACTGTACCAATACCATCCTCTCCTCTCAGTCGCCGGCGTCGAATTTCTCCGCTGCAATCAAACC
TCGCAAACGTGTAATTAAACCTGCGGTTAAAGATGTTCTCAACAATGAGAAGAAAGGCGAATCAAGTGTTCCGTCTGAATCTACATCCGTTAATTTGCAAGCTCCAAACC
CTAGTTCTGATTTTCTTCCCACGGAACCCAGCTCTAATTCTCCTCCTGCAGAACCAAACCCTAGTTCTGATTCTCTTTTTACAGAACCTAGTTCTAGTAGTCTTCCTACA
GAAGCCTCCACTCCTTCGCGGCGTTCTGATTTGCCGTCTAGTTCAGGTAATCGTACTTTCTGGTATTCGTTTCCGTGTTATGATGTTGGTGTCTGGCCCTTGATTCTTTT
AGCAGGATTACTGGAACAGATCGTGTTTCCGAGCCCCAGTCATTCTACAGTCGAAGGCACCCTGCGAATAAAAGGAAGAGCACAGAGGGGTGAGAGTAGAGATGGATACA
ATAGCCCATCCAAAGCGAGGACAGTTCCTTATAGAAAGAGGCAGCGTGCCATATATGGGGAAGATGAGTCCAAGATTGAGCTTCCACGGGAATTTGTTGAGCAGCAGAAA
GCATATTTTTCAGAAGTAGATGCATTTGAACTGCCAGTAGAGGAAGCTAAATCATCTGACTCCGAGTAG

mRNA sequence

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Protein sequence

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MESQKRNLRARKPLSDCTNTILSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSVPSESTSVNLQAPNPSSDFLPTEPSSNSPPAEPNPSSDSLFTEPSSSSLPT
EASTPSRRSDLPSSSGNRTFWYSFPCYDVGVWPLILLAGLLEQIVFPSPSHSTVEGTLRIKGRAQRGESRDGYNSPSKARTVPYRKRQRAIYGEDESKIELPREFVEQQK
AYFSEVDAFELPVEEAKSSDSE

Lag0030244 (gene) of Sponge gourd (AG-4) v1 genome