; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0030305 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0030305
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr8:46272816..46275871
RNA-Seq ExpressionLag0030305
SyntenyLag0030305
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW13148.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]1.2e-4635.17Show/hide
Query:  KVRQDKSP--SINVNSNTVEVFAHQIRCKMGTWPNSYLGLPLS------------------------------GGRLTLLQATLSNLPTYYLSLFQIPKK
        KV  +KS    IN++   +   A  + CK   WP  YLGLPL                               GGR+TL+Q+ L++LP+Y+LSLF+IP  
Subjt:  KVRQDKSP--SINVNSNTVEVFAHQIRCKMGTWPNSYLGLPLS------------------------------GGRLTLLQATLSNLPTYYLSLFQIPKK

Query:  VGIEIERIYWAFLWRGGTTNNGQHLVKWEKLLHPIDKGGLGLQSLFDKNKALLAKWTWRFNHEKNALWREVILAKYGSPSNRKRATPA---NFKGPRRNI
        V  +IER+   FLW G       HLV+W+ +  P   GGLGL ++  +N ALL KW WR+  E +ALW +VIL+ YGS SN   A      + + P + I
Subjt:  VGIEIERIYWAFLWRGGTTNNGQHLVKWEKLLHPIDKGGLGLQSLFDKNKALLAKWTWRFNHEKNALWREVILAKYGSPSNRKRATPA---NFKGPRRNI

Query:  AKQHILITSRIEHQLGNGGDTFFWTDSWINSIPLASRFPLLYQLSHCKNATVKEVWNTSNNF-WDLNLGRNLKDTEAAEWAELSVELDTITLS-HTEDAW
        A+     +    + +GNG    FW D W    PL +++P L+++   KN ++  V   S  F W+LN  RNL D+E  +   L   LD + LS    DA 
Subjt:  AKQHILITSRIEHQLGNGGDTFFWTDSWINSIPLASRFPLLYQLSHCKNATVKEVWNTSNNF-WDLNLGRNLKDTEAAEWAELSVELDTITLS-HTEDAW

Query:  KWPLSPSGSFSTKSLIIDMAGTNNLIEPSLAKTIWKGNYPKKIK
         WPLS SG FS KS  + ++ ++   +   +K +W    P K+K
Subjt:  KWPLSPSGSFSTKSLIIDMAGTNNLIEPSLAKTIWKGNYPKKIK

RVW16209.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]1.6e-4634.88Show/hide
Query:  KVRQDKSP--SINVNSNTVEVFAHQIRCKMGTWPNSYLGLPLS------------------------------GGRLTLLQATLSNLPTYYLSLFQIPKK
        KV  +KS    IN++   +   A  + CK   WP  YLGLPL                               GGR+TL+Q+ L++LP+Y+LSLF++P  
Subjt:  KVRQDKSP--SINVNSNTVEVFAHQIRCKMGTWPNSYLGLPLS------------------------------GGRLTLLQATLSNLPTYYLSLFQIPKK

Query:  VGIEIERIYWAFLWRGGTTNNGQHLVKWEKLLHPIDKGGLGLQSLFDKNKALLAKWTWRFNHEKNALWREVILAKYGSPSNRKRATPA---NFKGPRRNI
        V  +IER+   FLW G       HLV+W+ +  P   GGLGL ++  +N ALL KW WR+  E +ALW +VIL+ YGS SN   A      + + P + I
Subjt:  VGIEIERIYWAFLWRGGTTNNGQHLVKWEKLLHPIDKGGLGLQSLFDKNKALLAKWTWRFNHEKNALWREVILAKYGSPSNRKRATPA---NFKGPRRNI

Query:  AKQHILITSRIEHQLGNGGDTFFWTDSWINSIPLASRFPLLYQLSHCKNATVKEVWNTSNNF-WDLNLGRNLKDTEAAEWAELSVELDTITLS-HTEDAW
        A+     +    +  GNG    FW D W    PL +++P L+++   KN ++  V   S  F W+LN  RNL D+E  +   L   LD + LS    DA 
Subjt:  AKQHILITSRIEHQLGNGGDTFFWTDSWINSIPLASRFPLLYQLSHCKNATVKEVWNTSNNF-WDLNLGRNLKDTEAAEWAELSVELDTITLS-HTEDAW

Query:  KWPLSPSGSFSTKSLIIDMAGTNNLIEPSLAKTIWKGNYPKKIK
         WPLS SG FS KS  + ++ ++   +   +K +W    P K+K
Subjt:  KWPLSPSGSFSTKSLIIDMAGTNNLIEPSLAKTIWKGNYPKKIK

RVW24937.1 putative ribonuclease H protein [Vitis vinifera]7.1e-4735.17Show/hide
Query:  KVRQDKSP--SINVNSNTVEVFAHQIRCKMGTWPNSYLGLPLS------------------------------GGRLTLLQATLSNLPTYYLSLFQIPKK
        KV  +KS    IN++   +   A  + CK   WP  YLGLPL                               GGR+TL Q+ L++LP+Y+LSLF+IP  
Subjt:  KVRQDKSP--SINVNSNTVEVFAHQIRCKMGTWPNSYLGLPLS------------------------------GGRLTLLQATLSNLPTYYLSLFQIPKK

Query:  VGIEIERIYWAFLWRGGTTNNGQHLVKWEKLLHPIDKGGLGLQSLFDKNKALLAKWTWRFNHEKNALWREVILAKYGSPSNRKRATPA---NFKGPRRNI
        V  +IER+   FLW G       HLV+W+ +  P   GGLGL ++  +N ALL KW WR+  E +ALW +VIL+ YGS SN   A      + + P + I
Subjt:  VGIEIERIYWAFLWRGGTTNNGQHLVKWEKLLHPIDKGGLGLQSLFDKNKALLAKWTWRFNHEKNALWREVILAKYGSPSNRKRATPA---NFKGPRRNI

Query:  AKQHILITSRIEHQLGNGGDTFFWTDSWINSIPLASRFPLLYQLSHCKNATVKEVWNTSNNF-WDLNLGRNLKDTEAAEWAELSVELDTITLSHT-EDAW
        A+     +    + +GNG    FW D W    PL  ++P L+++   KN ++  V   S  F W+LN  RNL D+E  +   L   +D + LSH+  DA 
Subjt:  AKQHILITSRIEHQLGNGGDTFFWTDSWINSIPLASRFPLLYQLSHCKNATVKEVWNTSNNF-WDLNLGRNLKDTEAAEWAELSVELDTITLSHT-EDAW

Query:  KWPLSPSGSFSTKSLIIDMAGTNNLIEPSLAKTIWKGNYPKKIK
         WPLS SG FS KS  + ++ ++   +   +K +W    P K+K
Subjt:  KWPLSPSGSFSTKSLIIDMAGTNNLIEPSLAKTIWKGNYPKKIK

RVW53321.1 putative ribonuclease H protein [Vitis vinifera]8.4e-4834.2Show/hide
Query:  WTKVRQDKSPSINVNS-NTVEVFAHQIRCKMGTWPNSYLGLPL------------------------------SGGRLTLLQATLSNLPTYYLSLFQIPK
        W KV  +KS  I +   N +E  A ++ CK+G  P+SYLGLPL                               GGRLTL+++TLS+LP Y++SLF +P+
Subjt:  WTKVRQDKSPSINVNS-NTVEVFAHQIRCKMGTWPNSYLGLPL------------------------------SGGRLTLLQATLSNLPTYYLSLFQIPK

Query:  KVGIEIERIYWAFLWRGGTTNNGQHLVKWEKLLHPIDKGGLGLQSLFDKNKALLAKWTWRFNHEKNALWREVILAKYGSPSN---RKRATPANFKGPRRN
        KV + +E+I   FLW GG      HLV+W  +     KGGLG+++L   NKALL KW WRF  E  ALW++ I  KYG        +  +  +  G  + 
Subjt:  KVGIEIERIYWAFLWRGGTTNNGQHLVKWEKLLHPIDKGGLGLQSLFDKNKALLAKWTWRFNHEKNALWREVILAKYGSPSN---RKRATPANFKGPRRN

Query:  IAKQHILITSRIEHQLGNGGDTFFWTDSWINSIPLASRFPLLYQLSHCKNATVKEVWNTS--NNFWDLNLGRNLKD--TEAAEWAELSVELDTITLSHTE
        I K+ + + S + +++GNG    FW D W    PL   FP L+ +S  K+A V EVWN     N W     R L D   E  EW  L ++   +     E
Subjt:  IAKQHILITSRIEHQLGNGGDTFFWTDSWINSIPLASRFPLLYQLSHCKNATVKEVWNTS--NNFWDLNLGRNLKD--TEAAEWAELSVELDTITLSHTE

Query:  DAWKWPLSPSGSFSTKSLIIDMAGTNNLIEPSLAKTIWKGNYPKKIKF-----SYGKLPTKPSILM--MFCKGVCLTCLFRLE
        D   W  S SG FS KSL   +    + + P +   IW+   P K+ F     S+GK+ T   +          C  CL  +E
Subjt:  DAWKWPLSPSGSFSTKSLIIDMAGTNNLIEPSLAKTIWKGNYPKKIKF-----SYGKLPTKPSILM--MFCKGVCLTCLFRLE

RVW76026.1 putative ribonuclease H protein [Vitis vinifera]1.2e-4635.26Show/hide
Query:  KVRQDKSPSINVNS-NTVEVFAHQIRCKMGTWPNSYLGLPL------------------------------SGGRLTLLQATLSNLPTYYLSLFQIPKKV
        ++  DKS  I V   N VE  A  I CK+G+ P SYLGLPL                               GGR+TL+++TL+N+P Y++S+  +P+KV
Subjt:  KVRQDKSPSINVNS-NTVEVFAHQIRCKMGTWPNSYLGLPL------------------------------SGGRLTLLQATLSNLPTYYLSLFQIPKKV

Query:  GIEIERIYWAFLWRGGTTNNGQHLVKWEKLLHPIDKGGLGLQSLFDKNKALLAKWTWRFNHEKNALWREVILAKYGSP----SNRKRATPANFKGPRRNI
         + +ERI   FLW GG      HLVKWE +    D GGLG++SL   NKALL KW+WRF  E+ A W +VI  KYG      S+++     +  G  + +
Subjt:  GIEIERIYWAFLWRGGTTNNGQHLVKWEKLLHPIDKGGLGLQSLFDKNKALLAKWTWRFNHEKNALWREVILAKYGSP----SNRKRATPANFKGPRRNI

Query:  AKQHILITSRIEHQLGNGGDTFFWTDSWINSIPLASRFPLLYQLSHCKNATVKEVW--NTSNNFWDLNLGRNLKDTEAAEWAELSVELDTITLSH-TEDA
         K+  ++ SR+   +GNG    FW D W    PL   FP L+ L+  K+A VK+VW  N     W     R   D E  E     V L+   +    +D 
Subjt:  AKQHILITSRIEHQLGNGGDTFFWTDSWINSIPLASRFPLLYQLSHCKNATVKEVW--NTSNNFWDLNLGRNLKDTEAAEWAELSVELDTITLSH-TEDA

Query:  WKWPLSPSGSFSTKSLIIDMAGTNNLIEPSLAKTIWKGNYPKKIKF
          W  +  G FS KSL   +   + +  PS A  IWK     K+ F
Subjt:  WKWPLSPSGSFSTKSLIIDMAGTNNLIEPSLAKTIWKGNYPKKIKF

TrEMBL top hitse value%identityAlignment
A0A438EZY9 Putative ribonuclease H protein4.1e-4834.2Show/hide
Query:  WTKVRQDKSPSINVNS-NTVEVFAHQIRCKMGTWPNSYLGLPL------------------------------SGGRLTLLQATLSNLPTYYLSLFQIPK
        W KV  +KS  I +   N +E  A ++ CK+G  P+SYLGLPL                               GGRLTL+++TLS+LP Y++SLF +P+
Subjt:  WTKVRQDKSPSINVNS-NTVEVFAHQIRCKMGTWPNSYLGLPL------------------------------SGGRLTLLQATLSNLPTYYLSLFQIPK

Query:  KVGIEIERIYWAFLWRGGTTNNGQHLVKWEKLLHPIDKGGLGLQSLFDKNKALLAKWTWRFNHEKNALWREVILAKYGSPSN---RKRATPANFKGPRRN
        KV + +E+I   FLW GG      HLV+W  +     KGGLG+++L   NKALL KW WRF  E  ALW++ I  KYG        +  +  +  G  + 
Subjt:  KVGIEIERIYWAFLWRGGTTNNGQHLVKWEKLLHPIDKGGLGLQSLFDKNKALLAKWTWRFNHEKNALWREVILAKYGSPSN---RKRATPANFKGPRRN

Query:  IAKQHILITSRIEHQLGNGGDTFFWTDSWINSIPLASRFPLLYQLSHCKNATVKEVWNTS--NNFWDLNLGRNLKD--TEAAEWAELSVELDTITLSHTE
        I K+ + + S + +++GNG    FW D W    PL   FP L+ +S  K+A V EVWN     N W     R L D   E  EW  L ++   +     E
Subjt:  IAKQHILITSRIEHQLGNGGDTFFWTDSWINSIPLASRFPLLYQLSHCKNATVKEVWNTS--NNFWDLNLGRNLKD--TEAAEWAELSVELDTITLSHTE

Query:  DAWKWPLSPSGSFSTKSLIIDMAGTNNLIEPSLAKTIWKGNYPKKIKF-----SYGKLPTKPSILM--MFCKGVCLTCLFRLE
        D   W  S SG FS KSL   +    + + P +   IW+   P K+ F     S+GK+ T   +          C  CL  +E
Subjt:  DAWKWPLSPSGSFSTKSLIIDMAGTNNLIEPSLAKTIWKGNYPKKIKF-----SYGKLPTKPSILM--MFCKGVCLTCLFRLE

A0A7C9A8S6 Reverse transcriptase domain-containing protein2.6e-4734.44Show/hide
Query:  KVRQDKSPSINVNS-NTVEVFAHQIRCKMGTWPNSYLGLPL------------------------------SGGRLTLLQATLSNLPTYYLSLFQIPKKV
        KV   KS  I +     ++       C +   P+ YLGLPL                               GGRLTLLQ+TL NLP YY+SLF IP  V
Subjt:  KVRQDKSPSINVNS-NTVEVFAHQIRCKMGTWPNSYLGLPL------------------------------SGGRLTLLQATLSNLPTYYLSLFQIPKKV

Query:  GIEIERIYWAFLWRGGTTNNGQHLVKWEKLLHPIDKGGLGLQSLFDKNKALLAKWTWRFNHEKNALWREVILAKYGSPSN---RKRATPANFKGPRRNIA
          ++ER+   FLW    ++ G H V W+++  P + GGLG++ L   N+AL+ KW WRF +E+ ALWR++I++KYG  S     K ++ A+  G  + I 
Subjt:  GIEIERIYWAFLWRGGTTNNGQHLVKWEKLLHPIDKGGLGLQSLFDKNKALLAKWTWRFNHEKNALWREVILAKYGSPSN---RKRATPANFKGPRRNIA

Query:  KQHILITSRIEHQLGNGGDTFFWTDSWINSIPLASRFPLLYQLSHCKNATVKEV--WNTSNNFWDLNLGRNLKDTEAAEWAEL---SVELDTITLSHTED
         +  +  S +  ++ NG   FFW D+W    PL  +FP L++L+  ++ATV +V  WN + + WD+   R+  D E      L     + + + L    D
Subjt:  KQHILITSRIEHQLGNGGDTFFWTDSWINSIPLASRFPLLYQLSHCKNATVKEV--WNTSNNFWDLNLGRNLKDTEAAEWAEL---SVELDTITLSHTED

Query:  AWKWPLSPSGSFSTKSLIIDMAGTNNLIEPSLAKTIWKGNYPKKIKF-----SYGKLPTK
           W L+ +G FS KSL   M G+N+L  P   K IWK   P K  F     S GK+PT+
Subjt:  AWKWPLSPSGSFSTKSLIIDMAGTNNLIEPSLAKTIWKGNYPKKIKF-----SYGKLPTK

A0A803P465 Uncharacterized protein1.1e-4833.52Show/hide
Query:  KVRQDKSPSINV--NSNTVEVFAHQIRCKMGTWPNSYLGLPL------------------------------SGGRLTLLQATLSNLPTYYLSLFQIPKK
        K+   KS  + +  +   V   A +I C++G+WP  YLG+PL                               GGRLTL+Q+ LS+LP Y+LSLF+ P+ 
Subjt:  KVRQDKSPSINV--NSNTVEVFAHQIRCKMGTWPNSYLGLPL------------------------------SGGRLTLLQATLSNLPTYYLSLFQIPKK

Query:  VGIEIERIYWAFLWRGGTTNNGQHLVKWEKLLHPIDKGGLGLQSLFDKNKALLAKWTWRFNHEKNALWREVILAKYGSPSN---RKRATPANFKGPRRNI
        V   +E++   FLW G  ++ G+HLV W+++  P  +GGLG+  L  +NK+LL KW WRF  E+N+LW  V++++YG   N    K+ +  + KGP R+I
Subjt:  VGIEIERIYWAFLWRGGTTNNGQHLVKWEKLLHPIDKGGLGLQSLFDKNKALLAKWTWRFNHEKNALWREVILAKYGSPSN---RKRATPANFKGPRRNI

Query:  AKQHILITSRIEHQLGNGGDTFFWTDSWINSIPLASRFPLLYQLSHCKNATVKEV---------WNTSNNFWDLNLGRNLKDTEAAEWAELSVELDTI-T
        +  +      +  +LG G    FW D WI+  PL S FP L  +S  +N  +KE+         W  S   W+    RNL D E      L  +++ +  
Subjt:  AKQHILITSRIEHQLGNGGDTFFWTDSWINSIPLASRFPLLYQLSHCKNATVKEV---------WNTSNNFWDLNLGRNLKDTEAAEWAELSVELDTI-T

Query:  LSHTEDAWKWPLSPSGSFSTKSLIIDMAGTNNLIEPSLAKTIWKGNYPKKIK
        LS +ED+  W   PSG FS KS    M    +       K++WK   P K+K
Subjt:  LSHTEDAWKWPLSPSGSFSTKSLIIDMAGTNNLIEPSLAKTIWKGNYPKKIK

A0A803P8A0 Uncharacterized protein1.1e-4834.1Show/hide
Query:  KVRQDKSPSINV--NSNTVEVFAHQIRCKMGTWPNSYLGLPLS------------------------------GGRLTLLQATLSNLPTYYLSLFQIPKK
        KV  +KS  + +  +   V   A+ I C++G WP +YLG+PL                               GGRLTL+Q+ LS+LP YYLSLF++PK 
Subjt:  KVRQDKSPSINV--NSNTVEVFAHQIRCKMGTWPNSYLGLPLS------------------------------GGRLTLLQATLSNLPTYYLSLFQIPKK

Query:  VGIEIERIYWAFLWRGGTTNNGQHLVKWEKLLHPIDKGGLGLQSLFDKNKALLAKWTWRFNHEKNALWREVILAKYGSPSN---RKRATPANFKGPRRNI
        V  E+E++   F W GG    G HLV W+++  P  +GGL +  L  +NK LL KW WRF  E N+LW +VI ++YG   N    K+    + +GP  +I
Subjt:  VGIEIERIYWAFLWRGGTTNNGQHLVKWEKLLHPIDKGGLGLQSLFDKNKALLAKWTWRFNHEKNALWREVILAKYGSPSN---RKRATPANFKGPRRNI

Query:  AKQHILITSRIEHQLGNGGDTFFWTDSWINSIPLASRFPLLYQLSHCKNATVKEVWNTSNNF------WDLNLGRNLKDTEAAEWAELSVELDTI-TLSH
        A  +      ++ ++GNG    FW D WI    L  +FP L  LS  KNA+++E+   +         WD    RN+ D E     +L  +L+ +  LS 
Subjt:  AKQHILITSRIEHQLGNGGDTFFWTDSWINSIPLASRFPLLYQLSHCKNATVKEVWNTSNNF------WDLNLGRNLKDTEAAEWAELSVELDTI-TLSH

Query:  TEDAWKWPLSPSGSFSTKSLIIDMAGTNNLIEPSLAKTIWKGNYPKKIK
         +D+  W     G FS+KS       T +  E S  K +WK   P K+K
Subjt:  TEDAWKWPLSPSGSFSTKSLIIDMAGTNNLIEPSLAKTIWKGNYPKKIK

A0A803QEA6 Uncharacterized protein2.6e-4733.52Show/hide
Query:  KVRQDKSPSINV--NSNTVEVFAHQIRCKMGTWPNSYLGLPLS------------------------------GGRLTLLQATLSNLPTYYLSLFQIPKK
        KV  +KS  + +  N   V   A  I C++G WP +YLG+ L                               GGRLTL+Q+ LS+LP YYLSLF+ PK 
Subjt:  KVRQDKSPSINV--NSNTVEVFAHQIRCKMGTWPNSYLGLPLS------------------------------GGRLTLLQATLSNLPTYYLSLFQIPKK

Query:  VGIEIERIYWAFLWRGGTTNNGQHLVKWEKLLHPIDKGGLGLQSLFDKNKALLAKWTWRFNHEKNALWREVILAKYGSPSN---RKRATPANFKGPRRNI
        V  E+E++   F W GG    G HLV W+++  P  +GGL +  L  +NK LL KW WRF  E N+LW +VI ++YG   N    K+    + +GP ++I
Subjt:  VGIEIERIYWAFLWRGGTTNNGQHLVKWEKLLHPIDKGGLGLQSLFDKNKALLAKWTWRFNHEKNALWREVILAKYGSPSN---RKRATPANFKGPRRNI

Query:  AKQHILITSRIEHQLGNGGDTFFWTDSWINSIPLASRFPLLYQLSHCKNATVKEVWNTSNNF------WDLNLGRNLKDTEAAEWAELSVELDTI-TLSH
        +  +      ++ ++GNG    FW D W+    L  +FP L  +S  KN +++E+             WDLN  RN+ D E     +L  +L+ +  L+ 
Subjt:  AKQHILITSRIEHQLGNGGDTFFWTDSWINSIPLASRFPLLYQLSHCKNATVKEVWNTSNNF------WDLNLGRNLKDTEAAEWAELSVELDTI-TLSH

Query:  TEDAWKWPLSPSGSFSTKSLIIDMAGTNNLIEPSLAKTIWKGNYPKKIK
         ED+  W     G FS+KS       T N  E    K +WK   P K+K
Subjt:  TEDAWKWPLSPSGSFSTKSLIIDMAGTNNLIEPSLAKTIWKGNYPKKIK

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657508.5e-2727.78Show/hide
Query:  VNSNTVEVFAHQIRCKMGTWPNSYLGLPLSGGRLTLLQATLSNLPTYYLSLFQIPKKVGIEIERIYWAFLWRGGTTNNGQHLVKWEKLLHPIDKGGLGLQ
        +N +T      ++  +M  W    L      GRLTL +A LS++P + +S   +P+ +   ++++   FLW        QHLVKW K+  P  +GGLG++
Subjt:  VNSNTVEVFAHQIRCKMGTWPNSYLGLPLSGGRLTLLQATLSNLPTYYLSLFQIPKKVGIEIERIYWAFLWRGGTTNNGQHLVKWEKLLHPIDKGGLGLQ

Query:  SLFDKNKALLAKWTWRFNHEKNALWREVILAKY--GSPSNRKRATP-ANFKGPRRNIAKQHILITSRIEHQL----GNGGDTFFWTDSWINSIPLASRFP
        +    N+AL++K  WR   EKN+LW  V+  KY  G   + +   P  ++    R+IA   I +   + H +    G+G    FWTD W++  PL     
Subjt:  SLFDKNKALLAKWTWRFNHEKNALWREVILAKY--GSPSNRKRATP-ANFKGPRRNIAKQHILITSRIEHQL----GNGGDTFFWTDSWINSIPLASRFP

Query:  LLYQLSHCKNATVKEVWNTSNNFWDLNLGRNLKDTEAAEWAELSVELDTITLSHTEDAWKWPLSPSGSFSTKSLIIDMAGTNNLIEPSLA---KTIWKGN
           + + C     K++W      WD     +   T        +V LD +T     D   W  S  G FS +S   +M   + +  P++A     +WK  
Subjt:  LLYQLSHCKNATVKEVWNTSNNFWDLNLGRNLKDTEAAEWAELSVELDTITLSHTEDAWKWPLSPSGSFSTKSLIIDMAGTNNLIEPSLA---KTIWKGN

Query:  YPKKIK
         P+++K
Subjt:  YPKKIK

P93295 Uncharacterized mitochondrial protein AtMg003105.7e-0727.46Show/hide
Query:  LPTYYLSLFQIPKKVGIEIERIYWAFLWRGGTTNNGQHLVKWEKLL-HPIDKGGLGLQSLFDKNKALLAKWTWRFNHEKNALWREVILAKYGSPSNRKRA
        LP Y +S F++ K +  ++      F W           V W+KL     D GGLG + L   N+ALLAK ++R  H+ + L   ++ ++Y   S+    
Subjt:  LPTYYLSLFQIPKKVGIEIERIYWAFLWRGGTTNNGQHLVKWEKLL-HPIDKGGLGLQSLFDKNKALLAKWTWRFNHEKNALWREVILAKYGSPSNRKRA

Query:  TPANFKG-PRRNIAKQHILITSRIEHQLGNGGDTFFWTDSWI
        +         R+I     L++  +   +G+G  T  W D WI
Subjt:  TPANFKG-PRRNIAKQHILITSRIEHQLGNGGDTFFWTDSWI

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein2.9e-1425.36Show/hide
Query:  LPTYYLSLFQIPKKVGIEIERIYWAFLWRGGTTNNGQHLVKWEKLLHPIDKGGLGLQSLFDKNKALLAKWTWRFNHEKNALWREVILAKYGSPSNRKRAT
        LPTY ++ F +PK V  +I  +   F WR      G H   W+ L     +GG+G + +   N ALL K  WR      +L  +V  ++Y   S+   A 
Subjt:  LPTYYLSLFQIPKKVGIEIERIYWAFLWRGGTTNNGQHLVKWEKLLHPIDKGGLGLQSLFDKNKALLAKWTWRFNHEKNALWREVILAKYGSPSNRKRAT

Query:  PANFKGPRRNIAKQHILITSRIEHQ-----LGNGGDTFFWTDSWINSIPLASRFPLLYQLSHCKNATVKEVWNTSNNFWDLNLGRNLKDTEAAEWAE---
             G R +   + I  +  I  Q     +GNG D   W   W++S P AS    + ++   + A+V  +   S          +L D    EW +   
Subjt:  PANFKGPRRNIAKQHILITSRIEHQ-----LGNGGDTFFWTDSWINSIPLASRFPLLYQLSHCKNATVKEVWNTSNNFWDLNLGRNLKDTEAAEWAE---

Query:  --LSVELDTITLSHTE-------DAWKWPLSPSGSFSTKS-------LIIDMAGTNNLIEPSL---AKTIWKGNYPKKIK
          L  E++   +           D++ W  + SG ++ KS       +I   +    + EPSL    + IWK     KI+
Subjt:  --LSVELDTITLSHTE-------DAWKWPLSPSGSFSTKS-------LIIDMAGTNNLIEPSL---AKTIWKGNYPKKIK

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.1e-0827.46Show/hide
Query:  LPTYYLSLFQIPKKVGIEIERIYWAFLWRGGTTNNGQHLVKWEKLL-HPIDKGGLGLQSLFDKNKALLAKWTWRFNHEKNALWREVILAKYGSPSNRKRA
        LP Y +S F++ K +  ++      F W           V W+KL     D GGLG + L   N+ALLAK ++R  H+ + L   ++ ++Y   S+    
Subjt:  LPTYYLSLFQIPKKVGIEIERIYWAFLWRGGTTNNGQHLVKWEKLL-HPIDKGGLGLQSLFDKNKALLAKWTWRFNHEKNALWREVILAKYGSPSNRKRA

Query:  TPANFKG-PRRNIAKQHILITSRIEHQLGNGGDTFFWTDSWI
        +         R+I     L++  +   +G+G  T  W D WI
Subjt:  TPANFKG-PRRNIAKQHILITSRIEHQLGNGGDTFFWTDSWI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTTAACTGAAAGAGACTTCAGGGAAAATCAGTCTCTGCAGAATGCTTCATGGAAGCCTTTTGAGGTTATTTGCAGTCAGCACCCAACTTTTGACCTTAAAGACGA
TGTTTGGACAAAGGTTAGACAGGATAAATCCCCCAGCATTAATGTGAATTCTAATACAGTGGAGGTTTTTGCCCACCAGATTCGTTGTAAAATGGGCACCTGGCCTAACT
CTTATTTGGGCTTGCCTTTATCCGGTGGTAGACTTACCCTCCTCCAAGCCACTTTATCAAACCTTCCTACTTATTACCTATCCCTATTCCAAATACCTAAAAAAGTTGGA
ATAGAGATAGAAAGGATATACTGGGCTTTCCTTTGGAGAGGAGGCACAACCAATAATGGGCAGCATCTTGTTAAATGGGAAAAGCTTCTTCATCCCATTGACAAAGGAGG
CCTTGGTCTCCAATCCTTATTTGACAAAAACAAAGCTCTTTTGGCCAAATGGACGTGGAGATTCAACCATGAAAAGAATGCTTTGTGGAGAGAGGTTATCCTAGCCAAAT
ATGGGTCTCCATCGAACAGGAAAAGGGCCACACCAGCCAACTTTAAAGGTCCAAGGAGGAATATTGCCAAGCAACACATCCTCATCACCAGTCGCATTGAGCATCAGCTT
GGAAATGGGGGCGATACCTTCTTTTGGACTGACTCATGGATTAATAGTATCCCTTTGGCCTCCAGGTTTCCCCTCCTTTATCAGCTTTCTCATTGTAAAAATGCAACAGT
CAAGGAGGTTTGGAACACATCAAACAACTTTTGGGACCTCAACCTGGGAAGGAATTTAAAAGATACAGAAGCTGCTGAATGGGCTGAGCTTAGTGTTGAACTTGACACCA
TCACTTTATCCCACACAGAAGACGCATGGAAATGGCCCTTGAGCCCAAGCGGATCTTTCTCAACAAAATCTCTCATCATTGACATGGCAGGTACCAACAACCTCATTGAG
CCATCCTTGGCAAAGACAATCTGGAAAGGAAATTACCCAAAGAAAATTAAATTTTCTTATGGGAAGTTGCCCACAAAGCCATCAATACTAATGATGTTTTGCAAAGGCGT
ATGCCTTACATGTCTCTTTCGCCTGGAAGATACCTATTATGCAAAAGTGACAACGATCTCAAGGCCACATCTTTTGCCCTTTGCCCCTTTGCTAAGAGATTTTGGTCCAG
AATCATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGTTAACTGAAAGAGACTTCAGGGAAAATCAGTCTCTGCAGAATGCTTCATGGAAGCCTTTTGAGGTTATTTGCAGTCAGCACCCAACTTTTGACCTTAAAGACGA
TGTTTGGACAAAGGTTAGACAGGATAAATCCCCCAGCATTAATGTGAATTCTAATACAGTGGAGGTTTTTGCCCACCAGATTCGTTGTAAAATGGGCACCTGGCCTAACT
CTTATTTGGGCTTGCCTTTATCCGGTGGTAGACTTACCCTCCTCCAAGCCACTTTATCAAACCTTCCTACTTATTACCTATCCCTATTCCAAATACCTAAAAAAGTTGGA
ATAGAGATAGAAAGGATATACTGGGCTTTCCTTTGGAGAGGAGGCACAACCAATAATGGGCAGCATCTTGTTAAATGGGAAAAGCTTCTTCATCCCATTGACAAAGGAGG
CCTTGGTCTCCAATCCTTATTTGACAAAAACAAAGCTCTTTTGGCCAAATGGACGTGGAGATTCAACCATGAAAAGAATGCTTTGTGGAGAGAGGTTATCCTAGCCAAAT
ATGGGTCTCCATCGAACAGGAAAAGGGCCACACCAGCCAACTTTAAAGGTCCAAGGAGGAATATTGCCAAGCAACACATCCTCATCACCAGTCGCATTGAGCATCAGCTT
GGAAATGGGGGCGATACCTTCTTTTGGACTGACTCATGGATTAATAGTATCCCTTTGGCCTCCAGGTTTCCCCTCCTTTATCAGCTTTCTCATTGTAAAAATGCAACAGT
CAAGGAGGTTTGGAACACATCAAACAACTTTTGGGACCTCAACCTGGGAAGGAATTTAAAAGATACAGAAGCTGCTGAATGGGCTGAGCTTAGTGTTGAACTTGACACCA
TCACTTTATCCCACACAGAAGACGCATGGAAATGGCCCTTGAGCCCAAGCGGATCTTTCTCAACAAAATCTCTCATCATTGACATGGCAGGTACCAACAACCTCATTGAG
CCATCCTTGGCAAAGACAATCTGGAAAGGAAATTACCCAAAGAAAATTAAATTTTCTTATGGGAAGTTGCCCACAAAGCCATCAATACTAATGATGTTTTGCAAAGGCGT
ATGCCTTACATGTCTCTTTCGCCTGGAAGATACCTATTATGCAAAAGTGACAACGATCTCAAGGCCACATCTTTTGCCCTTTGCCCCTTTGCTAAGAGATTTTGGTCCAG
AATCATAA
Protein sequenceShow/hide protein sequence
MQLTERDFRENQSLQNASWKPFEVICSQHPTFDLKDDVWTKVRQDKSPSINVNSNTVEVFAHQIRCKMGTWPNSYLGLPLSGGRLTLLQATLSNLPTYYLSLFQIPKKVG
IEIERIYWAFLWRGGTTNNGQHLVKWEKLLHPIDKGGLGLQSLFDKNKALLAKWTWRFNHEKNALWREVILAKYGSPSNRKRATPANFKGPRRNIAKQHILITSRIEHQL
GNGGDTFFWTDSWINSIPLASRFPLLYQLSHCKNATVKEVWNTSNNFWDLNLGRNLKDTEAAEWAELSVELDTITLSHTEDAWKWPLSPSGSFSTKSLIIDMAGTNNLIE
PSLAKTIWKGNYPKKIKFSYGKLPTKPSILMMFCKGVCLTCLFRLEDTYYAKVTTISRPHLLPFAPLLRDFGPES