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Lag0030387 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0030387
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein farnesyltransferase subunit beta
Genome locationchr8:46836412..46840355
RNA-Seq ExpressionLag0030387
SyntenyLag0030387
Gene Ontology termsGO:0018343 - protein farnesylation (biological process)
GO:0005965 - protein farnesyltransferase complex (cellular component)
GO:0004660 - protein farnesyltransferase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001330 - PFTB repeat
IPR008930 - Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
IPR026872 - Protein farnesyltransferase subunit beta
IPR045089 - Prenyltransferase subunit beta


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594044.1 Protein farnesyltransferase subunit beta, partial [Cucurbita argyrosperma subsp. sororia]9.9e-4594.74Show/hide
Query:  VASILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ
        VASILNILDDELV NVGNYILS QTFEGGIAGEPGSEAHGGYTFCGLA MILINEV RLDLRSLV+WVVFRQAGLECGFQGRTNKLVDGCYSFWQ
Subjt:  VASILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ

KAG7017761.1 Protein farnesyltransferase subunit beta [Cucurbita argyrosperma subsp. argyrosperma]9.9e-4594.74Show/hide
Query:  VASILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ
        VASILNILDDELV NVGNYILS QTFEGGIAGEPGSEAHGGYTFCGLA MILINEV RLDLRSLV+WVVFRQAGLECGFQGRTNKLVDGCYSFWQ
Subjt:  VASILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ

XP_022158918.1 protein farnesyltransferase subunit beta [Momordica charantia]9.9e-4594.74Show/hide
Query:  VASILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ
        VASILNILDDELV NVGNYILS QTFEGGIAGEPGSEAHGGYTFCGLA MILINEV RLDLRSLV+WVVFRQAGLECGFQGRTNKLVDGCYSFWQ
Subjt:  VASILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ

XP_022934867.1 protein farnesyltransferase subunit beta [Cucurbita moschata]9.9e-4594.74Show/hide
Query:  VASILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ
        VASILNILDDELV NVGNYILS QTFEGGIAGEPGSEAHGGYTFCGLA MILINEV RLDLRSLV+WVVFRQAGLECGFQGRTNKLVDGCYSFWQ
Subjt:  VASILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ

XP_023527307.1 protein farnesyltransferase subunit beta [Cucurbita pepo subsp. pepo]9.9e-4594.74Show/hide
Query:  VASILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ
        VASILNILDDELV NVGNYILS QTFEGGIAGEPGSEAHGGYTFCGLA MILINEV RLDLRSLV+WVVFRQAGLECGFQGRTNKLVDGCYSFWQ
Subjt:  VASILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ

TrEMBL top hitse value%identityAlignment
A0A0A0LG61 Protein farnesyltransferase subunit beta4.1e-4492.63Show/hide
Query:  VASILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ
        VASILNILDDELV NVGNYI S QTFEGGIAGEPGSEAHGGYTFCGLA +ILINEV RLDLRSL+DWVVFRQAGLECGFQGRTNKLVDGCYSFWQ
Subjt:  VASILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ

A0A5A7UD15 Protein farnesyltransferase subunit beta4.1e-4492.63Show/hide
Query:  VASILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ
        VASILNILDDELV NVGNYI S QTFEGGIAGEPGSEAHGGYTFCGLA +ILINEV RLDLRSL+DWVVFRQAGLECGFQGRTNKLVDGCYSFWQ
Subjt:  VASILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ

A0A6J1DXE6 Protein farnesyltransferase subunit beta4.8e-4594.74Show/hide
Query:  VASILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ
        VASILNILDDELV NVGNYILS QTFEGGIAGEPGSEAHGGYTFCGLA MILINEV RLDLRSLV+WVVFRQAGLECGFQGRTNKLVDGCYSFWQ
Subjt:  VASILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ

A0A6J1F3Z8 Protein farnesyltransferase subunit beta4.8e-4594.74Show/hide
Query:  VASILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ
        VASILNILDDELV NVGNYILS QTFEGGIAGEPGSEAHGGYTFCGLA MILINEV RLDLRSLV+WVVFRQAGLECGFQGRTNKLVDGCYSFWQ
Subjt:  VASILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ

A0A6J1J3Q0 Protein farnesyltransferase subunit beta1.4e-4493.68Show/hide
Query:  VASILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ
        VASILNILD+ELV NVGNYILS QTFEGGIAGEPGSEAHGGYTFCGLA MILINEV RLDLRSLV+WVVFRQAGLECGFQGRTNKLVDGCYSFWQ
Subjt:  VASILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ

SwissProt top hitse value%identityAlignment
P49355 Protein farnesyltransferase subunit beta7.4e-2756.84Show/hide
Query:  VASILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ
        VAS+ NI+  +L      +I   Q +EGGI G PG EAHGGYTFCGLAA++++ + + L+L+SL+ WV  RQ   E GFQGR NKLVDGCYSFWQ
Subjt:  VASILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ

Q02293 Protein farnesyltransferase subunit beta7.4e-2756.84Show/hide
Query:  VASILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ
        VAS+ NI+  +L      +I   Q +EGGI G PG EAHGGYTFCGLAA++++ + + L+L+SL+ WV  RQ   E GFQGR NKLVDGCYSFWQ
Subjt:  VASILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ

Q04903 Protein farnesyltransferase subunit beta1.4e-4184.21Show/hide
Query:  VASILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ
        VAS+LNILDDEL+ NVG++ILS QT+EGG+AGEPGSEAHGGYTFCGLAAMILI EV RLDL  L+DWVVFRQ G ECGFQGRTNKLVDGCYSFWQ
Subjt:  VASILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ

Q38920 Protein farnesyltransferase subunit beta9.3e-3877.89Show/hide
Query:  VASILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ
        VASILNI+DDEL   +G+YILS QT+EGGI GEPGSEAHGGYT+CGLAAMILINEV RL+L SL++W V RQ G+E GFQGRTNKLVDGCY+FWQ
Subjt:  VASILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ

Q8K2I1 Protein farnesyltransferase subunit beta7.4e-2756.84Show/hide
Query:  VASILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ
        VAS+ NI+  +L      +I   Q +EGGI G PG EAHGGYTFCGLAA++++ + + L+L+SL+ WV  RQ   E GFQGR NKLVDGCYSFWQ
Subjt:  VASILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ

Arabidopsis top hitse value%identityAlignment
AT2G39550.1 Prenyltransferase family protein7.4e-1442.05Show/hide
Query:  NYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEV-----------QRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFW
        NYIL+ Q+++GG    PGSE+HGG T+C +A++ L+  +             +D   L++W + RQA  + GFQGRTNK  D CY+FW
Subjt:  NYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEV-----------QRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFW

AT3G12070.1 RAB geranylgeranyl transferase beta subunit 23.1e-1238.04Show/hide
Query:  SILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFW
        SIL  LD   V    +YI+S +  +GG    PG+E+H G  FC + A+ +   + R+D   L  W+  RQ     G  GR  KL D CYS+W
Subjt:  SILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFW

AT3G12070.2 RAB geranylgeranyl transferase beta subunit 23.1e-1238.04Show/hide
Query:  SILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFW
        SIL  LD   V    +YI+S +  +GG    PG+E+H G  FC + A+ +   + R+D   L  W+  RQ     G  GR  KL D CYS+W
Subjt:  SILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFW

AT5G12210.1 RAB geranylgeranyl transferase beta subunit 14.0e-1235.34Show/hide
Query:  SVLGCSWNRLTDHKQKVA----SILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQ--AGLECG
        S  G  W  +      +A    SIL  LD   V     YI+S +  +GG    PG+E+H G  FC + A+ +   +  +D  SL  W+  RQ  AG   G
Subjt:  SVLGCSWNRLTDHKQKVA----SILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQ--AGLECG

Query:  FQGRTNKLVDGCYSFW
          GR  KL D CYS+W
Subjt:  FQGRTNKLVDGCYSFW

AT5G40280.1 Prenyltransferase family protein6.6e-3977.89Show/hide
Query:  VASILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ
        VASILNI+DDEL   +G+YILS QT+EGGI GEPGSEAHGGYT+CGLAAMILINEV RL+L SL++W V RQ G+E GFQGRTNKLVDGCY+FWQ
Subjt:  VASILNILDDELVHNVGNYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCGACACACAACCGTCAAGAACCATCCTTTTTGGGAGCTAGAAGTGCTGGAACAACACATGGACTTAGCCTTGGTTGCTATGAAGCACGGATACCCACGATCTC
CCTCTTCGGCGTCGCTGTCGCCGTCGTCGTCAAAAGGGGTGATCATCAGTTGGTCGGGGTCGATTTTGGGCTCAAACCAACGCTGACCGTTGATATATCGGTCTCCGTCG
ATCGGTTGAAATCGGTTTTAGGGTGTTCATGGAATCGACTGACTGACCACAAACAAAAGGTTGCCAGTATATTGAACATCTTGGATGATGAACTAGTTCACAACGTTGGA
AACTACATTTTAAGTGTTCAAACTTTTGAAGGTGGCATTGCAGGAGAACCTGGATCTGAGGCACATGGTGGGTACACCTTTTGCGGTTTGGCTGCCATGATTCTGATCAA
TGAAGTCCAGCGGTTGGACTTGAGGAGTTTAGTTGATTGGGTGGTGTTTCGTCAAGCTGGTTTAGAGTGTGGATTTCAAGGAAGAACAAATAAGTTGGTCGATGGCTGCT
ACTCGTTCTGGCAGGAAGTCTTTGAGATTGATTCCATCCGTGGAACTCAAGACCTGCCGGAACCCCTAGGGGCGAGGAGAAGGTCTTCTATGGAGTCTGAGATCCAGACC
AGCACTACCTCTTTAGTTGACAGGACAAATTCTCCTATGCTCCTCTTGAATTCTCACCACTCTCCCCTTATAATTTCTATCAAAACCGCACGAGAAGAATTTGTTCTCTA
TCCTAACTCCACAGGTCTTTGGCATCGACATGACTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCGACACACAACCGTCAAGAACCATCCTTTTTGGGAGCTAGAAGTGCTGGAACAACACATGGACTTAGCCTTGGTTGCTATGAAGCACGGATACCCACGATCTC
CCTCTTCGGCGTCGCTGTCGCCGTCGTCGTCAAAAGGGGTGATCATCAGTTGGTCGGGGTCGATTTTGGGCTCAAACCAACGCTGACCGTTGATATATCGGTCTCCGTCG
ATCGGTTGAAATCGGTTTTAGGGTGTTCATGGAATCGACTGACTGACCACAAACAAAAGGTTGCCAGTATATTGAACATCTTGGATGATGAACTAGTTCACAACGTTGGA
AACTACATTTTAAGTGTTCAAACTTTTGAAGGTGGCATTGCAGGAGAACCTGGATCTGAGGCACATGGTGGGTACACCTTTTGCGGTTTGGCTGCCATGATTCTGATCAA
TGAAGTCCAGCGGTTGGACTTGAGGAGTTTAGTTGATTGGGTGGTGTTTCGTCAAGCTGGTTTAGAGTGTGGATTTCAAGGAAGAACAAATAAGTTGGTCGATGGCTGCT
ACTCGTTCTGGCAGGAAGTCTTTGAGATTGATTCCATCCGTGGAACTCAAGACCTGCCGGAACCCCTAGGGGCGAGGAGAAGGTCTTCTATGGAGTCTGAGATCCAGACC
AGCACTACCTCTTTAGTTGACAGGACAAATTCTCCTATGCTCCTCTTGAATTCTCACCACTCTCCCCTTATAATTTCTATCAAAACCGCACGAGAAGAATTTGTTCTCTA
TCCTAACTCCACAGGTCTTTGGCATCGACATGACTACTGA
Protein sequenceShow/hide protein sequence
MKSTHNRQEPSFLGARSAGTTHGLSLGCYEARIPTISLFGVAVAVVVKRGDHQLVGVDFGLKPTLTVDISVSVDRLKSVLGCSWNRLTDHKQKVASILNILDDELVHNVG
NYILSVQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQAGLECGFQGRTNKLVDGCYSFWQEVFEIDSIRGTQDLPEPLGARRRSSMESEIQT
STTSLVDRTNSPMLLLNSHHSPLIISIKTAREEFVLYPNSTGLWHRHDY