CuGenDBv2

Gene ID	Lag0030426
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	53EXOc domain-containing protein
Genome location	chr8:47141189..47141620
RNA-Seq Expression	Lag0030426
Synteny	Lag0030426
Gene Ontology terms	GO:0006261 - DNA-dependent DNA replication (biological process) GO:0006302 - double-strand break repair (biological process) GO:0071897 - DNA biosynthetic process (biological process) GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process) GO:0003677 - DNA binding (molecular function) GO:0003887 - DNA-directed DNA polymerase activity (molecular function) GO:0004527 - exonuclease activity (molecular function)
InterPro domains	IPR002298 - DNA polymerase A

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6602717.1 hypothetical protein SDJN03_07950, partial [Cucurbita argyrosperma subsp. sororia]

2.1e-46

80.31

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Query:  MAEASANIGVNIPPFLNSASRGSLPSRTLKAAESALTTKANTWRTKPLKLSAFAAASSRFTSAAFKQTDGEKLRPRIEADDSRMGRVFFLDVNPLCYQGS
        MAEASAN+G+NIPPFLNS S  SLPSRTLKAAES  TTKA  WRTKPLKLS F AASSR TS+ FKQ +  KL P +EAD+ R GRVFFLDVNPLCYQGS
Subjt:  MAEASANIGVNIPPFLNSASRGSLPSRTLKAAESALTTKANTWRTKPLKLSAFAAASSRFTSAAFKQTDGEKLRPRIEADDSRMGRVFFLDVNPLCYQGS

Query:  RPSLHNFGRWVSIFFEEVSHSDPVIAV
        RPSLHNFGRWVSIFFEEVS SDPVIAV
Subjt:  RPSLHNFGRWVSIFFEEVSHSDPVIAV

XP_022961199.1 uncharacterized protein LOC111461781 [Cucurbita moschata]

1.3e-46

81.1

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Query:  MAEASANIGVNIPPFLNSASRGSLPSRTLKAAESALTTKANTWRTKPLKLSAFAAASSRFTSAAFKQTDGEKLRPRIEADDSRMGRVFFLDVNPLCYQGS
        MAEASANIG+NIPPFLNS S  SLPSRTLKAAES  TTKA +WRTKPLKLS F AASSR TS+ FKQ +  KL P +EAD+ R GRVFFLDVNPLCYQGS
Subjt:  MAEASANIGVNIPPFLNSASRGSLPSRTLKAAESALTTKANTWRTKPLKLSAFAAASSRFTSAAFKQTDGEKLRPRIEADDSRMGRVFFLDVNPLCYQGS

Query:  RPSLHNFGRWVSIFFEEVSHSDPVIAV
        RPSLHNFGRWVSIFFEEVS SDPVIAV
Subjt:  RPSLHNFGRWVSIFFEEVSHSDPVIAV

XP_022990137.1 uncharacterized protein LOC111487120 [Cucurbita maxima]

1.0e-48

83.46

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Query:  MAEASANIGVNIPPFLNSASRGSLPSRTLKAAESALTTKANTWRTKPLKLSAFAAASSRFTSAAFKQTDGEKLRPRIEADDSRMGRVFFLDVNPLCYQGS
        MAEASANIG+NIPPFLNSAS  SLPSRTLKAAES  TTKA +WRTKPLKLS FAAA SR TS+ FKQ +  KL PR+EAD+ R GRVFFLDVNPLCYQGS
Subjt:  MAEASANIGVNIPPFLNSASRGSLPSRTLKAAESALTTKANTWRTKPLKLSAFAAASSRFTSAAFKQTDGEKLRPRIEADDSRMGRVFFLDVNPLCYQGS

Query:  RPSLHNFGRWVSIFFEEVSHSDPVIAV
        RPSLHNFGRWVSIFFEEVSHSDPVIAV
Subjt:  RPSLHNFGRWVSIFFEEVSHSDPVIAV

XP_023542307.1 uncharacterized protein LOC111802238 [Cucurbita pepo subsp. pepo]

3.0e-48

82.68

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Query:  MAEASANIGVNIPPFLNSASRGSLPSRTLKAAESALTTKANTWRTKPLKLSAFAAASSRFTSAAFKQTDGEKLRPRIEADDSRMGRVFFLDVNPLCYQGS
        MAEASANIG+NIPPF NSAS  SLPSRTLKAAES  TTKA +WRTKPLKLS F AASSR TS+ FKQ +  KL PR+EAD+ R GRVFFLDVNPLCYQGS
Subjt:  MAEASANIGVNIPPFLNSASRGSLPSRTLKAAESALTTKANTWRTKPLKLSAFAAASSRFTSAAFKQTDGEKLRPRIEADDSRMGRVFFLDVNPLCYQGS

Query:  RPSLHNFGRWVSIFFEEVSHSDPVIAV
        RPSLHNFGRWVSIFFEEVSHSDPVIAV
Subjt:  RPSLHNFGRWVSIFFEEVSHSDPVIAV

XP_038884032.1 5'-3' exonuclease [Benincasa hispida]

1.6e-46

81.54

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Query:  MAEASANIGV-NIPPFLNSASRGSLPSRTLKAAESALTT--KANTWRTKPLKLSAFAAASSRFTSAAFKQTDGEKLRPRIEADDSRMGRVFFLDVNPLCY
        MAEASANIGV N+PPFLNS+SR SLPSRTLK AE+A+T+  KANTWRTKPLKL+ F AASSR+TSAAF QTD  K +PRIEAD+ R GRVFFLDVNPLCY
Subjt:  MAEASANIGV-NIPPFLNSASRGSLPSRTLKAAESALTT--KANTWRTKPLKLSAFAAASSRFTSAAFKQTDGEKLRPRIEADDSRMGRVFFLDVNPLCY

Query:  QGSRPSLHNFGRWVSIFFEEVSHSDPVIAV
        QG+RPSLHNFGRW+SIFFEEVSHSDPVIAV
Subjt:  QGSRPSLHNFGRWVSIFFEEVSHSDPVIAV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LQN4 53EXOc domain-containing protein

6.3e-44

79.07

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Query:  MAEASANIGVNIPPFLNSASRGSLPSRTLKAAESALTT--KANTWRTKPLKLSAFAAASSRFTSAAFKQTDGEKLRPRIEADDSRMGRVFFLDVNPLCYQ
        MAEASANIGVN PPFLNS+S   LPSRTLK  E  LT+  K NTWRTKPL L+AF A SSR TSAAF QTD  K +PRIEAD+SR GRVFFLDVNPLCYQ
Subjt:  MAEASANIGVNIPPFLNSASRGSLPSRTLKAAESALTT--KANTWRTKPLKLSAFAAASSRFTSAAFKQTDGEKLRPRIEADDSRMGRVFFLDVNPLCYQ

Query:  GSRPSLHNFGRWVSIFFEEVSHSDPVIAV
        GS+PSL NFGRWVSIFFEEVSHSDPVIAV
Subjt:  GSRPSLHNFGRWVSIFFEEVSHSDPVIAV

A0A1S3B2X7 5'-3' exonuclease

1.3e-41

75.19

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Query:  MAEASANIGVNIPPFLNSASRGSLPSRTLKAAESALTT--KANTWRTKPLKLSAFAAASSRFTSAAFKQTDGEKLRPRIEADDSRMGRVFFLDVNPLCYQ
        M EASA IGVN PPFLNS+SR  LPSRT      ALT+  K NTWRTKPLKL+AF   SSR TSAAF QTD  K +PRIEAD+ R GRVFFLDVNPLCYQ
Subjt:  MAEASANIGVNIPPFLNSASRGSLPSRTLKAAESALTT--KANTWRTKPLKLSAFAAASSRFTSAAFKQTDGEKLRPRIEADDSRMGRVFFLDVNPLCYQ

Query:  GSRPSLHNFGRWVSIFFEEVSHSDPVIAV
        G++PSL NFGRWVSIFFEEVSHSDPVIAV
Subjt:  GSRPSLHNFGRWVSIFFEEVSHSDPVIAV

A0A6J1DGI1 uncharacterized protein LOC111020233

1.3e-44

77.95

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Query:  MAEASANIGVNIPPFLNSASRGSLPSRTLKAAESALTTKANTWRTKPLKLSAFAAASSRFTSAAFKQTDGEKLRPRIEADDSRMGRVFFLDVNPLCYQGS
        MAEA ANIGVNIPPFLNSASR SLPSRTLK  ES LTTK+N+WRTK L+LSAF  AS     + FKQTDG  L+P IEAD+ R GRVFFLDVNPLCY+GS
Subjt:  MAEASANIGVNIPPFLNSASRGSLPSRTLKAAESALTTKANTWRTKPLKLSAFAAASSRFTSAAFKQTDGEKLRPRIEADDSRMGRVFFLDVNPLCYQGS

Query:  RPSLHNFGRWVSIFFEEVSHSDPVIAV
        RPSLHNFGRW SIFFE+VSHSDPVIAV
Subjt:  RPSLHNFGRWVSIFFEEVSHSDPVIAV

A0A6J1HDC1 uncharacterized protein LOC111461781

6.1e-47

81.1

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Query:  MAEASANIGVNIPPFLNSASRGSLPSRTLKAAESALTTKANTWRTKPLKLSAFAAASSRFTSAAFKQTDGEKLRPRIEADDSRMGRVFFLDVNPLCYQGS
        MAEASANIG+NIPPFLNS S  SLPSRTLKAAES  TTKA +WRTKPLKLS F AASSR TS+ FKQ +  KL P +EAD+ R GRVFFLDVNPLCYQGS
Subjt:  MAEASANIGVNIPPFLNSASRGSLPSRTLKAAESALTTKANTWRTKPLKLSAFAAASSRFTSAAFKQTDGEKLRPRIEADDSRMGRVFFLDVNPLCYQGS

Query:  RPSLHNFGRWVSIFFEEVSHSDPVIAV
        RPSLHNFGRWVSIFFEEVS SDPVIAV
Subjt:  RPSLHNFGRWVSIFFEEVSHSDPVIAV

A0A6J1JHT6 uncharacterized protein LOC111487120

5.0e-49

83.46

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Query:  MAEASANIGVNIPPFLNSASRGSLPSRTLKAAESALTTKANTWRTKPLKLSAFAAASSRFTSAAFKQTDGEKLRPRIEADDSRMGRVFFLDVNPLCYQGS
        MAEASANIG+NIPPFLNSAS  SLPSRTLKAAES  TTKA +WRTKPLKLS FAAA SR TS+ FKQ +  KL PR+EAD+ R GRVFFLDVNPLCYQGS
Subjt:  MAEASANIGVNIPPFLNSASRGSLPSRTLKAAESALTTKANTWRTKPLKLSAFAAASSRFTSAAFKQTDGEKLRPRIEADDSRMGRVFFLDVNPLCYQGS

Query:  RPSLHNFGRWVSIFFEEVSHSDPVIAV
        RPSLHNFGRWVSIFFEEVSHSDPVIAV
Subjt:  RPSLHNFGRWVSIFFEEVSHSDPVIAV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G34380.1 5'-3' exonuclease family protein

2.8e-12

39.36

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Query:  RTKPLKLSAFAAASSRFTSAAFKQTDGEKLRPRIEADDSRMG----------RVFFLDVNPLCYQGSRPSLHNFGRWVSIFFEEVSHSDPVIAV
        +T+P +    +++SS F+S +  +T       ++   D   G          RVFFLDV+PLCY+G++PS   FG W+S+FF +VS +DPVIAV
Subjt:  RTKPLKLSAFAAASSRFTSAAFKQTDGEKLRPRIEADDSRMG----------RVFFLDVNPLCYQGSRPSLHNFGRWVSIFFEEVSHSDPVIAV

AT1G34380.2 5'-3' exonuclease family protein

2.8e-12

39.36

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Query:  RTKPLKLSAFAAASSRFTSAAFKQTDGEKLRPRIEADDSRMG----------RVFFLDVNPLCYQGSRPSLHNFGRWVSIFFEEVSHSDPVIAV
        +T+P +    +++SS F+S +  +T       ++   D   G          RVFFLDV+PLCY+G++PS   FG W+S+FF +VS +DPVIAV
Subjt:  RTKPLKLSAFAAASSRFTSAAFKQTDGEKLRPRIEADDSRMG----------RVFFLDVNPLCYQGSRPSLHNFGRWVSIFFEEVSHSDPVIAV

Sequences

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CDS sequence

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ATGGCAGAGGCGAGCGCCAACATAGGCGTTAATATTCCGCCATTTTTGAACTCTGCATCGCGTGGTTCCTTACCGTCGAGGACTCTGAAAGCCGCCGAATCTGCATTAAC
AACCAAAGCCAATACATGGAGAACGAAGCCATTGAAGCTAAGTGCTTTTGCTGCCGCATCTTCTCGTTTTACTTCTGCAGCTTTTAAACAAACAGATGGTGAGAAGTTGC
GGCCAAGAATTGAAGCTGATGATTCAAGAATGGGAAGGGTCTTCTTCCTTGACGTAAATCCTCTCTGCTATCAAGGTAGCAGACCTAGTTTGCACAATTTTGGCCGCTGG
GTTTCCATTTTCTTCGAGGAAGTTAGCCACAGTGATCCTGTTATTGCTGTAAGTGCCCTTGTCTCTGTATTGCATATATCATCAATAATGGCGAGAGCATAG

mRNA sequence

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Protein sequence

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MAEASANIGVNIPPFLNSASRGSLPSRTLKAAESALTTKANTWRTKPLKLSAFAAASSRFTSAAFKQTDGEKLRPRIEADDSRMGRVFFLDVNPLCYQGSRPSLHNFGRW
VSIFFEEVSHSDPVIAVSALVSVLHISSIMARA

Lag0030426 (gene) of Sponge gourd (AG-4) v1 genome