CuGenDBv2

Gene ID	Lag0030468
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	DEAD-box ATP-dependent RNA helicase FANCM isoform X2
Genome location	chr8:47515577..47518476
RNA-Seq Expression	Lag0030468
Synteny	Lag0030468
Gene Ontology terms	GO:0006281 - DNA repair (biological process) GO:0032508 - DNA duplex unwinding (biological process) GO:0016020 - membrane (cellular component) GO:0003677 - DNA binding (molecular function) GO:0005524 - ATP binding (molecular function) GO:0016787 - hydrolase activity (molecular function) GO:0043138 - 3'-5' DNA helicase activity (molecular function)
InterPro domains	IPR039686 - FANCM/Mph1-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6578303.1 DEAD-box ATP-dependent RNA helicase FANCM, partial [Cucurbita argyrosperma subsp. sororia]

6.4e-181

75.81

Show/hide

Query:  GSINEVSASEAELEGPLVYPEVSAPPNPAEDNCVSDYCSPKHPTNIDLFGSDFVSVGAMGKDQISRSPVFSSKNFLHPYSVAAGNKIFLSSSELGSCGVR
        GSINEVSA + ELEGP+VYPEVSAPPNP E+NC S YCS KHP+NI   GS FVSV AMG+DQISR PVFSSK  LH  SV A +KI LSS ELGS  VR
Subjt:  GSINEVSASEAELEGPLVYPEVSAPPNPAEDNCVSDYCSPKHPTNIDLFGSDFVSVGAMGKDQISRSPVFSSKNFLHPYSVAAGNKIFLSSSELGSCGVR

Query:  TVQDL--KTEAANEPTTSQTKFLQDEVLPSPETGDVTVLEDKAMNQIEKIHQSTTVKRTFFHKGDNAGEKPAVLEIEPQLPPAGECSIIETQLSPRLTNL
        T QDL  ++EA +EPTTSQTKFLQ+EVLPSPET D TVLEDKA+NQIEKIHQST +KRTFF++GDN  EKP VLEIEPQ PPA ECSI+ETQLSPRLTNL
Subjt:  TVQDL--KTEAANEPTTSQTKFLQDEVLPSPETGDVTVLEDKAMNQIEKIHQSTTVKRTFFHKGDNAGEKPAVLEIEPQLPPAGECSIIETQLSPRLTNL

Query:  IESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEGSRAGNDVSLSSGEVRPSVLEEIDSVGIKSSASGSPAFDETQTP
        IESGFVPDSPID+CGY+RQRI ES ISQF LPVQ D EQ+LKSSSPGI++RINCNEGS AGNDV L+SGE RPSVLE+ DSVG+KS    SP  +ETQTP
Subjt:  IESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEGSRAGNDVSLSSGEVRPSVLEEIDSVGIKSSASGSPAFDETQTP

Query:  LAVITSSCDTEDWHLVTGEKSSSVKKPCKFKRLRKVGDVEKNENMESMEKTSVSTLANIVKTFSSTRQMKKKKRDGERRFDDNARAFIEEEAEVSSDATI
         A+I SSCD EDW+LV+GEKSSSV+KP KFKRLRKVGDVEKNEN ES EKTSVS LAN+V TFSS+R +KKKKRDGERRF+DN RA+IEEEAEVSSDATI
Subjt:  LAVITSSCDTEDWHLVTGEKSSSVKKPCKFKRLRKVGDVEKNENMESMEKTSVSTLANIVKTFSSTRQMKKKKRDGERRFDDNARAFIEEEAEVSSDATI

Query:  SEDEEDDMIKSSFDSFIDDRVSASATSTQDETGRLDMMAIY--SWRVNTTYSRLVSQFAIGVL
        S DEEDD IKSSFDSFIDDRVSASATSTQDETG  DMMAIY  S    + + RL S  A  V+
Subjt:  SEDEEDDMIKSSFDSFIDDRVSASATSTQDETGRLDMMAIY--SWRVNTTYSRLVSQFAIGVL

XP_022939320.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X2 [Cucurbita moschata]

6.9e-183

76.84

Show/hide

Query:  GSINEVSASEAELEGPLVYPEVSAPPNPAEDNCVSDYCSPKHPTNIDLFGSDFVSVGAMGKDQISRSPVFSSKNFLHPYSVAAGNKIFLSSSELGSCGVR
        GSINEVSA + ELEGP+VYPEVSAPPNP E+NC S YCS KHP+NI   GS FVSV AMG+DQISR PVFSSK  LH  SV A +KI LSS ELGS  VR
Subjt:  GSINEVSASEAELEGPLVYPEVSAPPNPAEDNCVSDYCSPKHPTNIDLFGSDFVSVGAMGKDQISRSPVFSSKNFLHPYSVAAGNKIFLSSSELGSCGVR

Query:  TVQDL--KTEAANEPTTSQTKFLQDEVLPSPETGDVTVLEDKAMNQIEKIHQSTTVKRTFFHKGDNAGEKPAVLEIEPQLPPAGECSIIETQLSPRLTNL
        T QDL  +TEA +EPTTSQTKFLQ+EVLPSPET D TVLEDKA+NQIEKIHQST +KRTFF++GDN  EKP VLEIEPQ PPA ECSIIETQLSPRLTNL
Subjt:  TVQDL--KTEAANEPTTSQTKFLQDEVLPSPETGDVTVLEDKAMNQIEKIHQSTTVKRTFFHKGDNAGEKPAVLEIEPQLPPAGECSIIETQLSPRLTNL

Query:  IESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEGSRAGNDVSLSSGEVRPSVLEEIDSVGIKSSASGSPAFDETQTP
        IESGFVPDSPID+CGY+RQRIYES ISQF LPVQ D EQ+LKSSSPGI++RINCNEGS AGNDV L+SGE RPSVLE+ DSVG+KS    SP  +ETQTP
Subjt:  IESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEGSRAGNDVSLSSGEVRPSVLEEIDSVGIKSSASGSPAFDETQTP

Query:  LAVITSSCDTEDWHLVTGEKSSSVKKPCKFKRLRKVGDVEKNENMESMEKTSVSTLANIVKTFSSTRQMKKKKRDGERRFDDNARAFIEEEAEVSSDATI
         A+I SSCD EDW+LV+GEKSSSV+KP KFKRLRKVGDVEKNEN ES EKTSVS LAN+V TFSS+R +KKKKRDGERRF+DN RA+IEEEAEVSSDATI
Subjt:  LAVITSSCDTEDWHLVTGEKSSSVKKPCKFKRLRKVGDVEKNENMESMEKTSVSTLANIVKTFSSTRQMKKKKRDGERRFDDNARAFIEEEAEVSSDATI

Query:  SEDEEDDMIKSSFDSFIDDRVSASATSTQDETGRLDMMAIY--SWRVNTTYSRLVSQFAIGV
        S DEEDDMIKSSFDSFIDDRVSASATSTQDETG  DMMAIY  S    + + RL S  A  V
Subjt:  SEDEEDDMIKSSFDSFIDDRVSASATSTQDETGRLDMMAIY--SWRVNTTYSRLVSQFAIGV

XP_023551393.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X1 [Cucurbita pepo subsp. pepo]

6.4e-181

75.81

Show/hide

Query:  GSINEVSASEAELEGPLVYPEVSAPPNPAEDNCVSDYCSPKHPTNIDLFGSDFVSVGAMGKDQISRSPVFSSKNFLHPYSVAAGNKIFLSSSELGSCGVR
        GSINEVSA + ELEGP+VYPEVSAPPNP E+NC S YCS KHP+NI   GS FVSV AMG+DQISR PVFSSK  LH  SV A +KI LSS ELGS  VR
Subjt:  GSINEVSASEAELEGPLVYPEVSAPPNPAEDNCVSDYCSPKHPTNIDLFGSDFVSVGAMGKDQISRSPVFSSKNFLHPYSVAAGNKIFLSSSELGSCGVR

Query:  TVQDL--KTEAANEPTTSQTKFLQDEVLPSPETGDVTVLEDKAMNQIEKIHQSTTVKRTFFHKGDNAGEKPAVLEIEPQLPPAGECSIIETQLSPRLTNL
        T QDL  ++EA +EPTTSQTKFLQ+EVLPSPET D TVLEDKA+NQIEKIHQST +KRTFF++GDN  EKP VLEIEPQ PPA ECSI+ETQLSPRLTNL
Subjt:  TVQDL--KTEAANEPTTSQTKFLQDEVLPSPETGDVTVLEDKAMNQIEKIHQSTTVKRTFFHKGDNAGEKPAVLEIEPQLPPAGECSIIETQLSPRLTNL

Query:  IESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEGSRAGNDVSLSSGEVRPSVLEEIDSVGIKSSASGSPAFDETQTP
        IESGFVPDSPID+CGY+RQRI ES ISQF LPVQ D EQ+LKSSSPGI++RINCNEGS AGNDV L+SGE RPSVLE+ DSVG+KS    SP  +ETQTP
Subjt:  IESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEGSRAGNDVSLSSGEVRPSVLEEIDSVGIKSSASGSPAFDETQTP

Query:  LAVITSSCDTEDWHLVTGEKSSSVKKPCKFKRLRKVGDVEKNENMESMEKTSVSTLANIVKTFSSTRQMKKKKRDGERRFDDNARAFIEEEAEVSSDATI
         A+I SSCD EDW+LV+GEKSSSV+KP KFKRLRKVGDVEKNEN ES EKTSVS LAN+V TFSS+R +KKKKRDGERRF+DN RA+IEEEAEVSSDATI
Subjt:  LAVITSSCDTEDWHLVTGEKSSSVKKPCKFKRLRKVGDVEKNENMESMEKTSVSTLANIVKTFSSTRQMKKKKRDGERRFDDNARAFIEEEAEVSSDATI

Query:  SEDEEDDMIKSSFDSFIDDRVSASATSTQDETGRLDMMAIY--SWRVNTTYSRLVSQFAIGVL
        S DEEDD IKSSFDSFIDDRVSASATSTQDETG  DMMAIY  S    + + RL S  A  V+
Subjt:  SEDEEDDMIKSSFDSFIDDRVSASATSTQDETGRLDMMAIY--SWRVNTTYSRLVSQFAIGVL

XP_023551394.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X2 [Cucurbita pepo subsp. pepo]

6.4e-181

75.81

Show/hide

Query:  GSINEVSASEAELEGPLVYPEVSAPPNPAEDNCVSDYCSPKHPTNIDLFGSDFVSVGAMGKDQISRSPVFSSKNFLHPYSVAAGNKIFLSSSELGSCGVR
        GSINEVSA + ELEGP+VYPEVSAPPNP E+NC S YCS KHP+NI   GS FVSV AMG+DQISR PVFSSK  LH  SV A +KI LSS ELGS  VR
Subjt:  GSINEVSASEAELEGPLVYPEVSAPPNPAEDNCVSDYCSPKHPTNIDLFGSDFVSVGAMGKDQISRSPVFSSKNFLHPYSVAAGNKIFLSSSELGSCGVR

Query:  TVQDL--KTEAANEPTTSQTKFLQDEVLPSPETGDVTVLEDKAMNQIEKIHQSTTVKRTFFHKGDNAGEKPAVLEIEPQLPPAGECSIIETQLSPRLTNL
        T QDL  ++EA +EPTTSQTKFLQ+EVLPSPET D TVLEDKA+NQIEKIHQST +KRTFF++GDN  EKP VLEIEPQ PPA ECSI+ETQLSPRLTNL
Subjt:  TVQDL--KTEAANEPTTSQTKFLQDEVLPSPETGDVTVLEDKAMNQIEKIHQSTTVKRTFFHKGDNAGEKPAVLEIEPQLPPAGECSIIETQLSPRLTNL

Query:  IESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEGSRAGNDVSLSSGEVRPSVLEEIDSVGIKSSASGSPAFDETQTP
        IESGFVPDSPID+CGY+RQRI ES ISQF LPVQ D EQ+LKSSSPGI++RINCNEGS AGNDV L+SGE RPSVLE+ DSVG+KS    SP  +ETQTP
Subjt:  IESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEGSRAGNDVSLSSGEVRPSVLEEIDSVGIKSSASGSPAFDETQTP

Query:  LAVITSSCDTEDWHLVTGEKSSSVKKPCKFKRLRKVGDVEKNENMESMEKTSVSTLANIVKTFSSTRQMKKKKRDGERRFDDNARAFIEEEAEVSSDATI
         A+I SSCD EDW+LV+GEKSSSV+KP KFKRLRKVGDVEKNEN ES EKTSVS LAN+V TFSS+R +KKKKRDGERRF+DN RA+IEEEAEVSSDATI
Subjt:  LAVITSSCDTEDWHLVTGEKSSSVKKPCKFKRLRKVGDVEKNENMESMEKTSVSTLANIVKTFSSTRQMKKKKRDGERRFDDNARAFIEEEAEVSSDATI

Query:  SEDEEDDMIKSSFDSFIDDRVSASATSTQDETGRLDMMAIY--SWRVNTTYSRLVSQFAIGVL
        S DEEDD IKSSFDSFIDDRVSASATSTQDETG  DMMAIY  S    + + RL S  A  V+
Subjt:  SEDEEDDMIKSSFDSFIDDRVSASATSTQDETGRLDMMAIY--SWRVNTTYSRLVSQFAIGVL

XP_023551395.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X3 [Cucurbita pepo subsp. pepo]

6.4e-181

75.81

Show/hide

Query:  GSINEVSASEAELEGPLVYPEVSAPPNPAEDNCVSDYCSPKHPTNIDLFGSDFVSVGAMGKDQISRSPVFSSKNFLHPYSVAAGNKIFLSSSELGSCGVR
        GSINEVSA + ELEGP+VYPEVSAPPNP E+NC S YCS KHP+NI   GS FVSV AMG+DQISR PVFSSK  LH  SV A +KI LSS ELGS  VR
Subjt:  GSINEVSASEAELEGPLVYPEVSAPPNPAEDNCVSDYCSPKHPTNIDLFGSDFVSVGAMGKDQISRSPVFSSKNFLHPYSVAAGNKIFLSSSELGSCGVR

Query:  TVQDL--KTEAANEPTTSQTKFLQDEVLPSPETGDVTVLEDKAMNQIEKIHQSTTVKRTFFHKGDNAGEKPAVLEIEPQLPPAGECSIIETQLSPRLTNL
        T QDL  ++EA +EPTTSQTKFLQ+EVLPSPET D TVLEDKA+NQIEKIHQST +KRTFF++GDN  EKP VLEIEPQ PPA ECSI+ETQLSPRLTNL
Subjt:  TVQDL--KTEAANEPTTSQTKFLQDEVLPSPETGDVTVLEDKAMNQIEKIHQSTTVKRTFFHKGDNAGEKPAVLEIEPQLPPAGECSIIETQLSPRLTNL

Query:  IESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEGSRAGNDVSLSSGEVRPSVLEEIDSVGIKSSASGSPAFDETQTP
        IESGFVPDSPID+CGY+RQRI ES ISQF LPVQ D EQ+LKSSSPGI++RINCNEGS AGNDV L+SGE RPSVLE+ DSVG+KS    SP  +ETQTP
Subjt:  IESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEGSRAGNDVSLSSGEVRPSVLEEIDSVGIKSSASGSPAFDETQTP

Query:  LAVITSSCDTEDWHLVTGEKSSSVKKPCKFKRLRKVGDVEKNENMESMEKTSVSTLANIVKTFSSTRQMKKKKRDGERRFDDNARAFIEEEAEVSSDATI
         A+I SSCD EDW+LV+GEKSSSV+KP KFKRLRKVGDVEKNEN ES EKTSVS LAN+V TFSS+R +KKKKRDGERRF+DN RA+IEEEAEVSSDATI
Subjt:  LAVITSSCDTEDWHLVTGEKSSSVKKPCKFKRLRKVGDVEKNENMESMEKTSVSTLANIVKTFSSTRQMKKKKRDGERRFDDNARAFIEEEAEVSSDATI

Query:  SEDEEDDMIKSSFDSFIDDRVSASATSTQDETGRLDMMAIY--SWRVNTTYSRLVSQFAIGVL
        S DEEDD IKSSFDSFIDDRVSASATSTQDETG  DMMAIY  S    + + RL S  A  V+
Subjt:  SEDEEDDMIKSSFDSFIDDRVSASATSTQDETGRLDMMAIY--SWRVNTTYSRLVSQFAIGVL

TrEMBL top hits

e value

%identity

Alignment

A0A6J1FGG7 DEAD-box ATP-dependent RNA helicase FANCM isoform X4

1.4e-176

69.88

Show/hide

Query:  GSINEVSASEAELEGPLVYPEVSAPPNPAEDNCVSDYCSPKHPTNIDLFGSDFVSVGAMGKDQISRSPVFSSKNFLHPYSVAAGNKIFLSSSELGSCGVR
        GSINEVSA + ELEGP+VYPEVSAPPNP E+NC S YCS KHP+NI   GS FVSV AMG+DQISR PVFSSK  LH  SV A +KI LSS ELGS  VR
Subjt:  GSINEVSASEAELEGPLVYPEVSAPPNPAEDNCVSDYCSPKHPTNIDLFGSDFVSVGAMGKDQISRSPVFSSKNFLHPYSVAAGNKIFLSSSELGSCGVR

Query:  TVQDL--KTEAANEPTTSQTKFLQDEVLPSPETGDVTVLEDKAMNQIEKIHQSTTVKRTFFHKGDNAGEKPAVLEIEPQLPPAGECSIIETQLSPRLTNL
        T QDL  +TEA +EPTTSQTKFLQ+EVLPSPET D TVLEDKA+NQIEKIHQST +KRTFF++GDN  EKP VLEIEPQ PPA ECSIIETQLSPRLTNL
Subjt:  TVQDL--KTEAANEPTTSQTKFLQDEVLPSPETGDVTVLEDKAMNQIEKIHQSTTVKRTFFHKGDNAGEKPAVLEIEPQLPPAGECSIIETQLSPRLTNL

Query:  IESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEGSRAGNDVSLSSGEVRPSVLEEIDSVGIKSSASGSPAFDETQTP
        IESGFVPDSPID+CGY+RQRIYES ISQF LPVQ D EQ+LKSSSPGI++RINCNEGS AGNDV L+SGE RPSVLE+ DSVG+KS    SP  +ETQTP
Subjt:  IESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEGSRAGNDVSLSSGEVRPSVLEEIDSVGIKSSASGSPAFDETQTP

Query:  LAVITSSCDTEDWHLVTGEKSSSVKKPCKFKRLRKVGDVEKNENMESMEKTSVSTLANIVKTFSSTRQMKKKKRD-------------------------
         A+I SSCD EDW+LV+GEKSSSV+KP KFKRLRKVGDVEKNEN ES EKTSVS LAN+V TFSS+R +KKKKRD                         
Subjt:  LAVITSSCDTEDWHLVTGEKSSSVKKPCKFKRLRKVGDVEKNENMESMEKTSVSTLANIVKTFSSTRQMKKKKRD-------------------------

Query:  ---------------------GERRFDDNARAFIEEEAEVSSDATISEDEEDDMIKSSFDSFIDDRVSASATSTQDETGRLDMMAIY--SWRVNTTYSRL
                             GERRF+DN RA+IEEEAEVSSDATIS DEEDDMIKSSFDSFIDDRVSASATSTQDETG  DMMAIY  S    + + RL
Subjt:  ---------------------GERRFDDNARAFIEEEAEVSSDATISEDEEDDMIKSSFDSFIDDRVSASATSTQDETGRLDMMAIY--SWRVNTTYSRL

Query:  VSQFAIGV
         S  A  V
Subjt:  VSQFAIGV

A0A6J1FGU4 DEAD-box ATP-dependent RNA helicase FANCM isoform X6

1.4e-176

69.88

Show/hide

Query:  GSINEVSASEAELEGPLVYPEVSAPPNPAEDNCVSDYCSPKHPTNIDLFGSDFVSVGAMGKDQISRSPVFSSKNFLHPYSVAAGNKIFLSSSELGSCGVR
        GSINEVSA + ELEGP+VYPEVSAPPNP E+NC S YCS KHP+NI   GS FVSV AMG+DQISR PVFSSK  LH  SV A +KI LSS ELGS  VR
Subjt:  GSINEVSASEAELEGPLVYPEVSAPPNPAEDNCVSDYCSPKHPTNIDLFGSDFVSVGAMGKDQISRSPVFSSKNFLHPYSVAAGNKIFLSSSELGSCGVR

Query:  TVQDL--KTEAANEPTTSQTKFLQDEVLPSPETGDVTVLEDKAMNQIEKIHQSTTVKRTFFHKGDNAGEKPAVLEIEPQLPPAGECSIIETQLSPRLTNL
        T QDL  +TEA +EPTTSQTKFLQ+EVLPSPET D TVLEDKA+NQIEKIHQST +KRTFF++GDN  EKP VLEIEPQ PPA ECSIIETQLSPRLTNL
Subjt:  TVQDL--KTEAANEPTTSQTKFLQDEVLPSPETGDVTVLEDKAMNQIEKIHQSTTVKRTFFHKGDNAGEKPAVLEIEPQLPPAGECSIIETQLSPRLTNL

Query:  IESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEGSRAGNDVSLSSGEVRPSVLEEIDSVGIKSSASGSPAFDETQTP
        IESGFVPDSPID+CGY+RQRIYES ISQF LPVQ D EQ+LKSSSPGI++RINCNEGS AGNDV L+SGE RPSVLE+ DSVG+KS    SP  +ETQTP
Subjt:  IESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEGSRAGNDVSLSSGEVRPSVLEEIDSVGIKSSASGSPAFDETQTP

Query:  LAVITSSCDTEDWHLVTGEKSSSVKKPCKFKRLRKVGDVEKNENMESMEKTSVSTLANIVKTFSSTRQMKKKKRD-------------------------
         A+I SSCD EDW+LV+GEKSSSV+KP KFKRLRKVGDVEKNEN ES EKTSVS LAN+V TFSS+R +KKKKRD                         
Subjt:  LAVITSSCDTEDWHLVTGEKSSSVKKPCKFKRLRKVGDVEKNENMESMEKTSVSTLANIVKTFSSTRQMKKKKRD-------------------------

Query:  ---------------------GERRFDDNARAFIEEEAEVSSDATISEDEEDDMIKSSFDSFIDDRVSASATSTQDETGRLDMMAIY--SWRVNTTYSRL
                             GERRF+DN RA+IEEEAEVSSDATIS DEEDDMIKSSFDSFIDDRVSASATSTQDETG  DMMAIY  S    + + RL
Subjt:  ---------------------GERRFDDNARAFIEEEAEVSSDATISEDEEDDMIKSSFDSFIDDRVSASATSTQDETGRLDMMAIY--SWRVNTTYSRL

Query:  VSQFAIGV
         S  A  V
Subjt:  VSQFAIGV

A0A6J1FLC0 DEAD-box ATP-dependent RNA helicase FANCM isoform X5

1.4e-176

69.88

Show/hide

Query:  GSINEVSASEAELEGPLVYPEVSAPPNPAEDNCVSDYCSPKHPTNIDLFGSDFVSVGAMGKDQISRSPVFSSKNFLHPYSVAAGNKIFLSSSELGSCGVR
        GSINEVSA + ELEGP+VYPEVSAPPNP E+NC S YCS KHP+NI   GS FVSV AMG+DQISR PVFSSK  LH  SV A +KI LSS ELGS  VR
Subjt:  GSINEVSASEAELEGPLVYPEVSAPPNPAEDNCVSDYCSPKHPTNIDLFGSDFVSVGAMGKDQISRSPVFSSKNFLHPYSVAAGNKIFLSSSELGSCGVR

Query:  TVQDL--KTEAANEPTTSQTKFLQDEVLPSPETGDVTVLEDKAMNQIEKIHQSTTVKRTFFHKGDNAGEKPAVLEIEPQLPPAGECSIIETQLSPRLTNL
        T QDL  +TEA +EPTTSQTKFLQ+EVLPSPET D TVLEDKA+NQIEKIHQST +KRTFF++GDN  EKP VLEIEPQ PPA ECSIIETQLSPRLTNL
Subjt:  TVQDL--KTEAANEPTTSQTKFLQDEVLPSPETGDVTVLEDKAMNQIEKIHQSTTVKRTFFHKGDNAGEKPAVLEIEPQLPPAGECSIIETQLSPRLTNL

Query:  IESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEGSRAGNDVSLSSGEVRPSVLEEIDSVGIKSSASGSPAFDETQTP
        IESGFVPDSPID+CGY+RQRIYES ISQF LPVQ D EQ+LKSSSPGI++RINCNEGS AGNDV L+SGE RPSVLE+ DSVG+KS    SP  +ETQTP
Subjt:  IESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEGSRAGNDVSLSSGEVRPSVLEEIDSVGIKSSASGSPAFDETQTP

Query:  LAVITSSCDTEDWHLVTGEKSSSVKKPCKFKRLRKVGDVEKNENMESMEKTSVSTLANIVKTFSSTRQMKKKKRD-------------------------
         A+I SSCD EDW+LV+GEKSSSV+KP KFKRLRKVGDVEKNEN ES EKTSVS LAN+V TFSS+R +KKKKRD                         
Subjt:  LAVITSSCDTEDWHLVTGEKSSSVKKPCKFKRLRKVGDVEKNENMESMEKTSVSTLANIVKTFSSTRQMKKKKRD-------------------------

Query:  ---------------------GERRFDDNARAFIEEEAEVSSDATISEDEEDDMIKSSFDSFIDDRVSASATSTQDETGRLDMMAIY--SWRVNTTYSRL
                             GERRF+DN RA+IEEEAEVSSDATIS DEEDDMIKSSFDSFIDDRVSASATSTQDETG  DMMAIY  S    + + RL
Subjt:  ---------------------GERRFDDNARAFIEEEAEVSSDATISEDEEDDMIKSSFDSFIDDRVSASATSTQDETGRLDMMAIY--SWRVNTTYSRL

Query:  VSQFAIGV
         S  A  V
Subjt:  VSQFAIGV

A0A6J1FMD3 DEAD-box ATP-dependent RNA helicase FANCM isoform X2

3.3e-183

76.84

Show/hide

Query:  GSINEVSASEAELEGPLVYPEVSAPPNPAEDNCVSDYCSPKHPTNIDLFGSDFVSVGAMGKDQISRSPVFSSKNFLHPYSVAAGNKIFLSSSELGSCGVR
        GSINEVSA + ELEGP+VYPEVSAPPNP E+NC S YCS KHP+NI   GS FVSV AMG+DQISR PVFSSK  LH  SV A +KI LSS ELGS  VR
Subjt:  GSINEVSASEAELEGPLVYPEVSAPPNPAEDNCVSDYCSPKHPTNIDLFGSDFVSVGAMGKDQISRSPVFSSKNFLHPYSVAAGNKIFLSSSELGSCGVR

Query:  TVQDL--KTEAANEPTTSQTKFLQDEVLPSPETGDVTVLEDKAMNQIEKIHQSTTVKRTFFHKGDNAGEKPAVLEIEPQLPPAGECSIIETQLSPRLTNL
        T QDL  +TEA +EPTTSQTKFLQ+EVLPSPET D TVLEDKA+NQIEKIHQST +KRTFF++GDN  EKP VLEIEPQ PPA ECSIIETQLSPRLTNL
Subjt:  TVQDL--KTEAANEPTTSQTKFLQDEVLPSPETGDVTVLEDKAMNQIEKIHQSTTVKRTFFHKGDNAGEKPAVLEIEPQLPPAGECSIIETQLSPRLTNL

Query:  IESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEGSRAGNDVSLSSGEVRPSVLEEIDSVGIKSSASGSPAFDETQTP
        IESGFVPDSPID+CGY+RQRIYES ISQF LPVQ D EQ+LKSSSPGI++RINCNEGS AGNDV L+SGE RPSVLE+ DSVG+KS    SP  +ETQTP
Subjt:  IESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEGSRAGNDVSLSSGEVRPSVLEEIDSVGIKSSASGSPAFDETQTP

Query:  LAVITSSCDTEDWHLVTGEKSSSVKKPCKFKRLRKVGDVEKNENMESMEKTSVSTLANIVKTFSSTRQMKKKKRDGERRFDDNARAFIEEEAEVSSDATI
         A+I SSCD EDW+LV+GEKSSSV+KP KFKRLRKVGDVEKNEN ES EKTSVS LAN+V TFSS+R +KKKKRDGERRF+DN RA+IEEEAEVSSDATI
Subjt:  LAVITSSCDTEDWHLVTGEKSSSVKKPCKFKRLRKVGDVEKNENMESMEKTSVSTLANIVKTFSSTRQMKKKKRDGERRFDDNARAFIEEEAEVSSDATI

Query:  SEDEEDDMIKSSFDSFIDDRVSASATSTQDETGRLDMMAIY--SWRVNTTYSRLVSQFAIGV
        S DEEDDMIKSSFDSFIDDRVSASATSTQDETG  DMMAIY  S    + + RL S  A  V
Subjt:  SEDEEDDMIKSSFDSFIDDRVSASATSTQDETGRLDMMAIY--SWRVNTTYSRLVSQFAIGV

A0A6J1K1N4 DEAD-box ATP-dependent RNA helicase FANCM isoform X2

3.4e-180

75.54

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Query:  GSINEVSASEAELEGPLVYPEVSAPPNPAEDNCVSDYCSPKHPTNIDLFGSDFVSVGAMGKDQISRSPVFSSKNFLHPYSVAAGNKIFLSSSELGSCGVR
        GSINEV+A +AELEGP+VYPEVSAPPNP E+NC+S YCS KHP+NI   GS FVSV AMG+DQISR PVFSSK  LH  SV A +KI LSS  LGS  VR
Subjt:  GSINEVSASEAELEGPLVYPEVSAPPNPAEDNCVSDYCSPKHPTNIDLFGSDFVSVGAMGKDQISRSPVFSSKNFLHPYSVAAGNKIFLSSSELGSCGVR

Query:  TVQDL--KTEAANEPTTSQTKFLQDEVLPSPETGDVTVLEDKAMNQIEKIHQSTTVKRTFFHKGDNAGEKPAVLEIEPQLPPAGECSIIETQLSPRLTNL
        T QDL  +TEA +EPTTSQTKFLQ+EVLPSPET D TVLEDKA+NQIEKIHQST +KRTFF++GDN  EKP V EIEPQ PPA EC+IIETQLSPRLTNL
Subjt:  TVQDL--KTEAANEPTTSQTKFLQDEVLPSPETGDVTVLEDKAMNQIEKIHQSTTVKRTFFHKGDNAGEKPAVLEIEPQLPPAGECSIIETQLSPRLTNL

Query:  IESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEGSRAGNDVSLSSGEVRPSVLEEIDSVGIKSSASGSPAFDETQTP
        IESGFVPDSPID+CGY+RQRIYES ISQF L VQ D EQ+LKSSSPGI++RINCNEGS AGND+ L+SGE RPSVLE+ DSVG+KS A  SP  +ETQTP
Subjt:  IESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEGSRAGNDVSLSSGEVRPSVLEEIDSVGIKSSASGSPAFDETQTP

Query:  LAVITSSCDTEDWHLVTGEKSSSVKKPCKFKRLRKVGDVEKNENMESMEKTSVSTLANIVKTFSSTRQMKKKKRDGERRFDDNARAFIEEEAEVSSDATI
         A+I SSCD EDW+LV+GEKSSSV+KP KFKRLRKVGDVEKNEN ES EKTSVS LAN+V TFSS+R +KKKKRDGERRF+DN R +IEEEAEVSSDATI
Subjt:  LAVITSSCDTEDWHLVTGEKSSSVKKPCKFKRLRKVGDVEKNENMESMEKTSVSTLANIVKTFSSTRQMKKKKRDGERRFDDNARAFIEEEAEVSSDATI

Query:  SEDEEDDMIKSSFDSFIDDRVSASATSTQDETGRLDMMAIY--SWRVNTTYSRLVSQFAIGV
        S DEEDD IKSSFDSFIDDRVSASATSTQDETG  DMMAIY  S    + + RL S  A  V
Subjt:  SEDEEDDMIKSSFDSFIDDRVSASATSTQDETGRLDMMAIY--SWRVNTTYSRLVSQFAIGV

SwissProt top hits

e value

%identity

Alignment

I3XHK1 DEAD-box ATP-dependent RNA helicase FANCM

2.2e-22

33.99

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Query:  QLSPRLTNLIESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEGSRAGNDVSLSSGEVRPSVLEEIDSVGIKSSASGS
        +LSPRLTN I+SG VP+SP+ D G    R  +    Q + P++   E   +SS P    +  CN+ +       L + +    +    + + +      S
Subjt:  QLSPRLTNLIESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEGSRAGNDVSLSSGEVRPSVLEEIDSVGIKSSASGS

Query:  PAFDETQTPLAVI--TSSCDTEDWHLVTGEKSSSVKKPCKFKRLRKVGDVEKNENMESMEKTSVSTLANIVKTFSSTRQMKKKKRDGERRFDDNARAFIE
        P  ++ +TPLA +  T+S   +DW + +GEK  ++++P K KRLR++GD        S  K +   +       S +R  K  +   +   DD+ + FI+
Subjt:  PAFDETQTPLAVI--TSSCDTEDWHLVTGEKSSSVKKPCKFKRLRKVGDVEKNENMESMEKTSVSTLANIVKTFSSTRQMKKKKRDGERRFDDNARAFIE

Query:  EEAEVSSDATISEDEEDDMIKSSF-DSFIDDRVSASATSTQDETGRLDMMAIY
        EEAEVSS A +S DE +D+   SF DSFIDD    +A +TQ E+G++DMMA+Y
Subjt:  EEAEVSSDATISEDEEDDMIKSSF-DSFIDDRVSASATSTQDETGRLDMMAIY

Arabidopsis top hits

e value

%identity

Alignment

AT1G35530.1 DEAD/DEAH box RNA helicase family protein

1.5e-23

33.73

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Query:  QLSPRLTNLIESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEGSRAGNDVSLSSGEVRPSVLEEIDSVGIKSSASGS
        +LSPRLTN I+SG VP+SP+ D G    R  +    Q + P++   E   +SS P    +  CN+ +       L + +    +    + + +      S
Subjt:  QLSPRLTNLIESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEGSRAGNDVSLSSGEVRPSVLEEIDSVGIKSSASGS

Query:  PAFDETQTPLAVI--TSSCDTEDWHLVTGEKSSSVKKPCKFKRLRKVGDVEKNENMESMEKTSVSTLANIVKTFSSTRQMKKKKRDGERRFDDNARAFIE
        P  ++ +TPLA +  T+S   +DW + +GEK  ++++P K KRLR++GD        S  K +   +       S +R  K  +   +   DD+ + FI+
Subjt:  PAFDETQTPLAVI--TSSCDTEDWHLVTGEKSSSVKKPCKFKRLRKVGDVEKNENMESMEKTSVSTLANIVKTFSSTRQMKKKKRDGERRFDDNARAFIE

Query:  EEAEVSSDATISEDEEDDMIKSSF-DSFIDDRVSASATSTQDETGRLDMMAIYSW
        EEAEVSS A +S DE +D+   SF DSFIDD    +A +TQ E+G++DMMA+Y +
Subjt:  EEAEVSSDATISEDEEDDMIKSSF-DSFIDDRVSASATSTQDETGRLDMMAIYSW

AT1G35530.2 DEAD/DEAH box RNA helicase family protein

1.4e-21

31.64

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Query:  QLSPRLTNLIESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEGSRAGNDVSLSSGEVRPSVLEEIDSVGIKSSASGS
        +LSPRLTN I+SG VP+SP+ D G    R  +    Q + P++   E   +SS P    +  CN+ +       L + +    +    + + +      S
Subjt:  QLSPRLTNLIESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEGSRAGNDVSLSSGEVRPSVLEEIDSVGIKSSASGS

Query:  PAFDETQTPLAVI--TSSCDTEDWHLVTGEKSSSVKKPCKFKRLRKVGDVEK--NENMESMEKTSVSTLANIVKTFSSTRQMKKKKRDGERRF-------
        P  ++ +TPLA +  T+S   +DW + +GEK  ++++P K KRLR++GD      EN   + +       +I       + ++ K +  E  F       
Subjt:  PAFDETQTPLAVI--TSSCDTEDWHLVTGEKSSSVKKPCKFKRLRKVGDVEK--NENMESMEKTSVSTLANIVKTFSSTRQMKKKKRDGERRF-------

Query:  -----------DDNARAFIEEEAEVSSDATISEDEEDDMIKSSF-DSFIDDRVSASATSTQDETGRLDMMAIYSW
                   DD+ + FI+EEAEVSS A +S DE +D+   SF DSFIDD    +A +TQ E+G++DMMA+Y +
Subjt:  -----------DDNARAFIEEEAEVSSDATISEDEEDDMIKSSF-DSFIDDRVSASATSTQDETGRLDMMAIYSW

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCGGGCGAGTGACAAGCAGACGAACAAACGAGCGGCGAGCGGTAGACGAACGATCGTGAACCCGAACCCCTGTTGCGAACGTGACAGACAACTAATTGCGAACGTGAA
CGATCTGTCGGTGAGTGGGTTGTCGGAGAAGAAGAGATCGTTGTCGGAAGGAGAGTTTGCTGGTGAAGGTTCAATTAATGAAGTCAGCGCTTCAGAAGCAGAATTAGAAG
GACCATTAGTCTATCCTGAAGTCTCAGCACCTCCAAATCCTGCAGAAGATAATTGTGTTTCTGATTACTGTTCTCCGAAGCATCCTACGAACATAGATCTCTTTGGTTCT
GATTTTGTATCTGTTGGTGCCATGGGAAAGGACCAAATATCTCGTTCCCCTGTGTTCTCTTCAAAAAATTTCTTGCATCCCTATTCTGTTGCTGCAGGCAATAAAATATT
CTTGAGTTCTTCTGAGCTAGGTTCTTGCGGTGTAAGAACTGTTCAGGATTTGAAGACTGAAGCTGCCAATGAACCAACAACTTCTCAAACAAAATTCTTACAGGATGAGG
TTCTACCAAGCCCTGAAACAGGTGATGTAACTGTCTTGGAAGACAAAGCAATGAATCAGATTGAGAAAATTCATCAAAGCACAACCGTGAAGAGAACTTTTTTTCATAAA
GGAGATAATGCTGGTGAAAAGCCTGCTGTTTTAGAGATTGAGCCACAATTACCCCCAGCTGGTGAATGCAGTATAATCGAGACTCAGCTTAGTCCTCGTCTCACTAATCT
AATCGAAAGTGGTTTTGTTCCAGATTCACCCATTGATGATTGTGGATATACTAGACAAAGGATATATGAATCCACAATATCACAGTTTACCTTGCCTGTCCAAACGGATG
TTGAACAGATTTTAAAATCTTCAAGTCCTGGGATAAGCGAAAGAATTAATTGCAATGAGGGATCCCGTGCTGGAAATGACGTTTCTCTCTCTAGTGGTGAAGTTCGTCCG
TCTGTACTCGAGGAGATTGATAGTGTGGGTATAAAATCAAGTGCCTCTGGTTCTCCTGCATTTGATGAAACACAAACTCCCTTGGCCGTTATTACAAGCAGTTGTGATAC
TGAAGATTGGCATTTAGTTACTGGAGAAAAGTCCAGCAGTGTAAAGAAGCCCTGCAAATTTAAAAGGTTGCGGAAGGTTGGAGACGTGGAGAAAAATGAGAACATGGAAA
GCATGGAAAAAACTTCAGTTTCAACACTGGCAAATATAGTCAAAACTTTTTCTAGCACCAGACAGATGAAAAAAAAGAAACGGGATGGTGAAAGGAGATTTGACGACAAT
GCTAGAGCATTTATTGAGGAGGAAGCTGAGGTTTCTTCGGATGCTACCATATCTGAGGATGAAGAAGATGACATGATTAAGAGCTCGTTCGACAGTTTCATAGATGATAG
GGTTAGTGCTAGTGCCACGAGTACTCAAGATGAAACAGGCAGACTTGATATGATGGCAATTTACAGTTGGAGGGTCAATACTACTTACAGCCGGTTAGTGTCTCAATTTG
CAATTGGGGTTTTGGCTTGGAGAGTGGAAATAAGAAGCTTTGGAGGCTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MRASDKQTNKRAASGRRTIVNPNPCCERDRQLIANVNDLSVSGLSEKKRSLSEGEFAGEGSINEVSASEAELEGPLVYPEVSAPPNPAEDNCVSDYCSPKHPTNIDLFGS
DFVSVGAMGKDQISRSPVFSSKNFLHPYSVAAGNKIFLSSSELGSCGVRTVQDLKTEAANEPTTSQTKFLQDEVLPSPETGDVTVLEDKAMNQIEKIHQSTTVKRTFFHK
GDNAGEKPAVLEIEPQLPPAGECSIIETQLSPRLTNLIESGFVPDSPIDDCGYTRQRIYESTISQFTLPVQTDVEQILKSSSPGISERINCNEGSRAGNDVSLSSGEVRP
SVLEEIDSVGIKSSASGSPAFDETQTPLAVITSSCDTEDWHLVTGEKSSSVKKPCKFKRLRKVGDVEKNENMESMEKTSVSTLANIVKTFSSTRQMKKKKRDGERRFDDN
ARAFIEEEAEVSSDATISEDEEDDMIKSSFDSFIDDRVSASATSTQDETGRLDMMAIYSWRVNTTYSRLVSQFAIGVLAWRVEIRSFGG

Lag0030468 (gene) of Sponge gourd (AG-4) v1 genome