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Lag0030471 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0030471
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description50S ribosomal protein L18-like
Genome locationchr8:47524102..47524884
RNA-Seq ExpressionLag0030471
SyntenyLag0030471
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7033427.1 NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]3.0e-1053.33Show/hide
Query:  MNFTAIASSLPSSS-VRSVHFSQWLSTPTTPSQKPSSLSWASSFPHISISGGSSFVSSNPAFAK---------------ESSRALIMAGKDRTDCSMVYR
        M FTAI+SS+PSS+ VRS+  SQ +STPTTP QK SSLSWASSFP IS+S GS FVSSNPA AK                + R    + K RTD  M   
Subjt:  MNFTAIASSLPSSS-VRSVHFSQWLSTPTTPSQKPSSLSWASSFPHISISGGSSFVSSNPAFAK---------------ESSRALIMAGKDRTDCSMVYR

Query:  ILNYF
        +LN F
Subjt:  ILNYF

XP_022152485.1 uncharacterized protein LOC111020202 [Momordica charantia]1.3e-1356.19Show/hide
Query:  MNFTAIASSLPS-SSVRSVHFSQWLSTPTTPSQKPSSLSWASSFPHISISGGSSFVSSNPAFAK---------------ESSRALIMAGKDRTDCSMVYR
        M FTA++SSLPS SSVRSV  SQWLS PTTPS+KPSSLSW SSFP+ISIS GSS +SSNPA AK                + R    + K RTD  M   
Subjt:  MNFTAIASSLPS-SSVRSVHFSQWLSTPTTPSQKPSSLSWASSFPHISISGGSSFVSSNPAFAK---------------ESSRALIMAGKDRTDCSMVYR

Query:  ILNYF
        +LN F
Subjt:  ILNYF

XP_022963861.1 uncharacterized protein LOC111464045 [Cucurbita moschata]5.5e-1254.29Show/hide
Query:  MNFTAIASSLPSSS-VRSVHFSQWLSTPTTPSQKPSSLSWASSFPHISISGGSSFVSSNPAFAK---------------ESSRALIMAGKDRTDCSMVYR
        M FTAI+SS+PSS+ VRS+  SQ +STPTTPSQK SSLSWASSFP IS+S GS FVSSNPA AK                + R    + K RTD  M   
Subjt:  MNFTAIASSLPSSS-VRSVHFSQWLSTPTTPSQKPSSLSWASSFPHISISGGSSFVSSNPAFAK---------------ESSRALIMAGKDRTDCSMVYR

Query:  ILNYF
        +LN F
Subjt:  ILNYF

XP_022990182.1 uncharacterized protein LOC111487153 [Cucurbita maxima]1.3e-1054.29Show/hide
Query:  MNFTAIASSLPSS-SVRSVHFSQWLSTPTTPSQKPSSLSWASSFPHISISGGSSFVSSNPAFAK---------------ESSRALIMAGKDRTDCSMVYR
        M FTAI+SS+PSS SVRS+  SQ +STPTTP QK SSLSWASSFP IS+S GS FVSSNPA AK                + R    + K RTD  M   
Subjt:  MNFTAIASSLPSS-SVRSVHFSQWLSTPTTPSQKPSSLSWASSFPHISISGGSSFVSSNPAFAK---------------ESSRALIMAGKDRTDCSMVYR

Query:  ILNYF
        +LN F
Subjt:  ILNYF

XP_023521951.1 uncharacterized protein LOC111785799 [Cucurbita pepo subsp. pepo]2.4e-1255.24Show/hide
Query:  MNFTAIASSLPSS-SVRSVHFSQWLSTPTTPSQKPSSLSWASSFPHISISGGSSFVSSNPAFAK---------------ESSRALIMAGKDRTDCSMVYR
        M FTAI+SS+PSS SVRS+  SQ +STPTTPSQK SSLSWASSFP IS+S GS FVSSNPA AK                + R    + K RTD  M   
Subjt:  MNFTAIASSLPSS-SVRSVHFSQWLSTPTTPSQKPSSLSWASSFPHISISGGSSFVSSNPAFAK---------------ESSRALIMAGKDRTDCSMVYR

Query:  ILNYF
        +LN F
Subjt:  ILNYF

TrEMBL top hitse value%identityAlignment
A0A1S3B2Q8 50S ribosomal protein L18-like2.6e-0749.04Show/hide
Query:  MNFTAIASSLPSSSVRSVHFSQWLSTPTTPSQKPSSLSWASSFPHISISGGSSFVSSNPAFAK---------------ESSRALIMAGKDRTDCSMVYRI
        M FTAIASSLPS S  SV  SQ    P+TP QK SSLSWASSFPH++I  GS F SSNP +AK                + R    + K RTD  M   +
Subjt:  MNFTAIASSLPSSSVRSVHFSQWLSTPTTPSQKPSSLSWASSFPHISISGGSSFVSSNPAFAK---------------ESSRALIMAGKDRTDCSMVYRI

Query:  LNYF
        LN F
Subjt:  LNYF

A0A6J1DE20 uncharacterized protein LOC1110202026.3e-1456.19Show/hide
Query:  MNFTAIASSLPS-SSVRSVHFSQWLSTPTTPSQKPSSLSWASSFPHISISGGSSFVSSNPAFAK---------------ESSRALIMAGKDRTDCSMVYR
        M FTA++SSLPS SSVRSV  SQWLS PTTPS+KPSSLSW SSFP+ISIS GSS +SSNPA AK                + R    + K RTD  M   
Subjt:  MNFTAIASSLPS-SSVRSVHFSQWLSTPTTPSQKPSSLSWASSFPHISISGGSSFVSSNPAFAK---------------ESSRALIMAGKDRTDCSMVYR

Query:  ILNYF
        +LN F
Subjt:  ILNYF

A0A6J1HH86 uncharacterized protein LOC1114640452.6e-1254.29Show/hide
Query:  MNFTAIASSLPSSS-VRSVHFSQWLSTPTTPSQKPSSLSWASSFPHISISGGSSFVSSNPAFAK---------------ESSRALIMAGKDRTDCSMVYR
        M FTAI+SS+PSS+ VRS+  SQ +STPTTPSQK SSLSWASSFP IS+S GS FVSSNPA AK                + R    + K RTD  M   
Subjt:  MNFTAIASSLPSSS-VRSVHFSQWLSTPTTPSQKPSSLSWASSFPHISISGGSSFVSSNPAFAK---------------ESSRALIMAGKDRTDCSMVYR

Query:  ILNYF
        +LN F
Subjt:  ILNYF

A0A6J1JHY7 uncharacterized protein LOC1114871536.5e-1154.29Show/hide
Query:  MNFTAIASSLPSS-SVRSVHFSQWLSTPTTPSQKPSSLSWASSFPHISISGGSSFVSSNPAFAK---------------ESSRALIMAGKDRTDCSMVYR
        M FTAI+SS+PSS SVRS+  SQ +STPTTP QK SSLSWASSFP IS+S GS FVSSNPA AK                + R    + K RTD  M   
Subjt:  MNFTAIASSLPSS-SVRSVHFSQWLSTPTTPSQKPSSLSWASSFPHISISGGSSFVSSNPAFAK---------------ESSRALIMAGKDRTDCSMVYR

Query:  ILNYF
        +LN F
Subjt:  ILNYF

A0A6J1JY30 uncharacterized protein LOC1114893274.7e-0970.31Show/hide
Query:  MNFTAIASSLPS-SSVRSVHFSQWLSTPTTPSQKPSSLSWASSFPHISISGGSSFVSSNPAFAK
        M F AI+SSLPS SSV SV   QW STPT  SQK SSLSWASSFPH++IS GS  VSSNPA  K
Subjt:  MNFTAIASSLPS-SSVRSVHFSQWLSTPTTPSQKPSSLSWASSFPHISISGGSSFVSSNPAFAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTTCACAGCAATAGCTTCTTCACTGCCGTCTTCTTCTGTCCGTTCAGTTCACTTCTCCCAGTGGCTATCAACTCCCACCACTCCATCACAGAAACCCTCGTCTCT
TTCGTGGGCATCTTCGTTTCCACATATTAGCATATCCGGAGGCTCTTCTTTCGTCTCTTCGAATCCCGCGTTTGCCAAGGAGAGTAGTCGTGCTCTTATTATGGCTGGGA
AAGACAGAACTGACTGTTCCATGGTATATAGAATTCTCAACTATTTTCTGCATCCTTCCAGGTCAAATGACTTTATTGCTGTTGTTGAGCAATTTCCCCGTTCTGCATCT
TTCAAATTCTTCATTTTTGTTGAGGATCCCACGTTGAAAAGATTAGTGGAGACCTCACAATTTATAAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAACTTCACAGCAATAGCTTCTTCACTGCCGTCTTCTTCTGTCCGTTCAGTTCACTTCTCCCAGTGGCTATCAACTCCCACCACTCCATCACAGAAACCCTCGTCTCT
TTCGTGGGCATCTTCGTTTCCACATATTAGCATATCCGGAGGCTCTTCTTTCGTCTCTTCGAATCCCGCGTTTGCCAAGGAGAGTAGTCGTGCTCTTATTATGGCTGGGA
AAGACAGAACTGACTGTTCCATGGTATATAGAATTCTCAACTATTTTCTGCATCCTTCCAGGTCAAATGACTTTATTGCTGTTGTTGAGCAATTTCCCCGTTCTGCATCT
TTCAAATTCTTCATTTTTGTTGAGGATCCCACGTTGAAAAGATTAGTGGAGACCTCACAATTTATAAGATAG
Protein sequenceShow/hide protein sequence
MNFTAIASSLPSSSVRSVHFSQWLSTPTTPSQKPSSLSWASSFPHISISGGSSFVSSNPAFAKESSRALIMAGKDRTDCSMVYRILNYFLHPSRSNDFIAVVEQFPRSAS
FKFFIFVEDPTLKRLVETSQFIR