; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0030472 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0030472
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibosomal L18p/L5e family protein
Genome locationchr8:47525474..47530839
RNA-Seq ExpressionLag0030472
SyntenyLag0030472
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005484 - Ribosomal protein L18
IPR036967 - Ribosomal protein S11 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602740.1 NAD(P)H-quinone oxidoreductase subunit T, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]5.2e-5197.2Show/hide
Query:  AWTRRSRGEVAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRIIGKLIAERSKEADVYAMSYEP
        AWTRRSRGE AKRPNKKSWKQRTDMYMRPFLLNVFFSKKF+HAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACR+IGKLIAERSKEADVYAMSYEP
Subjt:  AWTRRSRGEVAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRIIGKLIAERSKEADVYAMSYEP

Query:  RKDERIE
        RKDERIE
Subjt:  RKDERIE

KAG7033427.1 NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]5.2e-5197.2Show/hide
Query:  AWTRRSRGEVAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRIIGKLIAERSKEADVYAMSYEP
        AWTRRSRGE AKRPNKKSWKQRTDMYMRPFLLNVFFSKKF+HAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACR+IGKLIAERSKEADVYAMSYEP
Subjt:  AWTRRSRGEVAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRIIGKLIAERSKEADVYAMSYEP

Query:  RKDERIE
        RKDERIE
Subjt:  RKDERIE

XP_022152485.1 uncharacterized protein LOC111020202 [Momordica charantia]6.1e-5285.16Show/hide
Query:  NSGQFSVSSLTRH-----IVLAWTRRSRGEVAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRI
        ++G  S+SS   H     I  AWTRRSRGE AKRPNKKSWKQRTDMYMRPFLLNVFFSKKF+HAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACR+
Subjt:  NSGQFSVSSLTRH-----IVLAWTRRSRGEVAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRI

Query:  IGKLIAERSKEADVYAMSYEPRKDERIE
        IGKLIAERSKEADVYAMSYEPRKDER+E
Subjt:  IGKLIAERSKEADVYAMSYEPRKDERIE

XP_022990182.1 uncharacterized protein LOC111487153 [Cucurbita maxima]5.2e-5197.2Show/hide
Query:  AWTRRSRGEVAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRIIGKLIAERSKEADVYAMSYEP
        AWTRRSRGE AKRPNKKSWKQRTDMYMRPFLLNVFFSKKF+HAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACR+IGKLIAERSKEADVYAMSYEP
Subjt:  AWTRRSRGEVAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRIIGKLIAERSKEADVYAMSYEP

Query:  RKDERIE
        RKDERIE
Subjt:  RKDERIE

XP_023521951.1 uncharacterized protein LOC111785799 [Cucurbita pepo subsp. pepo]5.2e-5197.2Show/hide
Query:  AWTRRSRGEVAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRIIGKLIAERSKEADVYAMSYEP
        AWTRRSRGE AKRPNKKSWKQRTDMYMRPFLLNVFFSKKF+HAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACR+IGKLIAERSKEADVYAMSYEP
Subjt:  AWTRRSRGEVAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRIIGKLIAERSKEADVYAMSYEP

Query:  RKDERIE
        RKDERIE
Subjt:  RKDERIE

TrEMBL top hitse value%identityAlignment
A0A4U5Q9H6 Uncharacterized protein2.8e-5081.75Show/hide
Query:  SLENSGQFSVSSLTRHIVLAWTRRSRGEVAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRIIG
        S+ N+   S  + T  I  AWTRRSRGE+AK+PNKKSWKQRTDMYMRPFLLNVFFS++F+ AKVMHRGTSKV+SVATTNAKDLR+SLPSLTDHNACRI+G
Subjt:  SLENSGQFSVSSLTRHIVLAWTRRSRGEVAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRIIG

Query:  KLIAERSKEADVYAMSYEPRKDERIE
        KLIAERSKEADVYAMSYEPRKDERIE
Subjt:  KLIAERSKEADVYAMSYEPRKDERIE

A0A6J1DE20 uncharacterized protein LOC1110202023.0e-5285.16Show/hide
Query:  NSGQFSVSSLTRH-----IVLAWTRRSRGEVAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRI
        ++G  S+SS   H     I  AWTRRSRGE AKRPNKKSWKQRTDMYMRPFLLNVFFSKKF+HAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACR+
Subjt:  NSGQFSVSSLTRH-----IVLAWTRRSRGEVAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRI

Query:  IGKLIAERSKEADVYAMSYEPRKDERIE
        IGKLIAERSKEADVYAMSYEPRKDER+E
Subjt:  IGKLIAERSKEADVYAMSYEPRKDERIE

A0A6J1HH86 uncharacterized protein LOC1114640454.3e-5197.2Show/hide
Query:  AWTRRSRGEVAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRIIGKLIAERSKEADVYAMSYEP
        AWTRRSRGE AKRPNKKSWKQRTDMYMRPFLLNVFFSKKF+HAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACR+IGKLIAERSKEADVYAMSYEP
Subjt:  AWTRRSRGEVAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRIIGKLIAERSKEADVYAMSYEP

Query:  RKDERIE
        RKDERIE
Subjt:  RKDERIE

A0A6J1JHY7 uncharacterized protein LOC1114871532.5e-5197.2Show/hide
Query:  AWTRRSRGEVAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRIIGKLIAERSKEADVYAMSYEP
        AWTRRSRGE AKRPNKKSWKQRTDMYMRPFLLNVFFSKKF+HAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACR+IGKLIAERSKEADVYAMSYEP
Subjt:  AWTRRSRGEVAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRIIGKLIAERSKEADVYAMSYEP

Query:  RKDERIE
        RKDERIE
Subjt:  RKDERIE

A0A6J1JY30 uncharacterized protein LOC1114893273.6e-5086.51Show/hide
Query:  GQFSVSSLTRH-----IVLAWTRRSRGEVAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRIIG
        G   VSS   H     I  AWTRRSR E AKRPNKKSWKQRTDMYMRPFLL+VFFSKKFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACR+IG
Subjt:  GQFSVSSLTRH-----IVLAWTRRSRGEVAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRIIG

Query:  KLIAERSKEADVYAMSYEPRKDERIE
        KLIAERSKEADVYAMSYEPRKDERIE
Subjt:  KLIAERSKEADVYAMSYEPRKDERIE

SwissProt top hitse value%identityAlignment
Q5P316 50S ribosomal protein L184.5e-0536.76Show/hide
Query:  LNVFFSKKFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRIIGKLIAERSKEADVYAMSYE
        L VF +   ++A+V+    S+V++ A+T   D+R+ LP+  +  A +++GKLIAER+K A V A++++
Subjt:  LNVFFSKKFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRIIGKLIAERSKEADVYAMSYE

Arabidopsis top hitse value%identityAlignment
AT1G08845.1 Ribosomal L18p/L5e family protein3.3e-1950Show/hide
Query:  AKRPNKK-SWKQRTDMYMRPFLLNVFFSKKFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRIIGKLIAERSKEADVYAMSYEPRKDERIE
        +K P+K  S+KQRT  YM PF L+VF SK+FV A + HR T + ++VA TN+KD++  L S  D  AC  IG++++ER+KEADVY  SY PR  ++ E
Subjt:  AKRPNKK-SWKQRTDMYMRPFLLNVFFSKKFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRIIGKLIAERSKEADVYAMSYEPRKDERIE

AT1G08845.2 Ribosomal L18p/L5e family protein3.3e-1950Show/hide
Query:  AKRPNKK-SWKQRTDMYMRPFLLNVFFSKKFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRIIGKLIAERSKEADVYAMSYEPRKDERIE
        +K P+K  S+KQRT  YM PF L+VF SK+FV A + HR T + ++VA TN+KD++  L S  D  AC  IG++++ER+KEADVY  SY PR  ++ E
Subjt:  AKRPNKK-SWKQRTDMYMRPFLLNVFFSKKFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRIIGKLIAERSKEADVYAMSYEPRKDERIE

AT3G20230.1 Ribosomal L18p/L5e family protein2.2e-4784.11Show/hide
Query:  AWTRRSRGEVAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRIIGKLIAERSKEADVYAMSYEP
        AWTRRSRGE AKRPN+KSWKQRTDMYMRPFLLNVFFS+KF+HAKVMHR TSKVISVATTNA+D+R ++PSL D+ ACR+IGKLIAERS EADVYA+SYEP
Subjt:  AWTRRSRGEVAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRIIGKLIAERSKEADVYAMSYEP

Query:  RKDERIE
        RK ERIE
Subjt:  RKDERIE

AT3G22450.1 Ribosomal L18p/L5e family protein7.8e-1339.8Show/hide
Query:  VAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRIIGKLIAERSKEADVYAMSYEPRKDERIE
        V KR    ++ Q T  +  PF L+++ SK+ V A V+HR TSKV++VA + +KD++  L S  +  AC  +G ++A+RS E D++ + Y PRK ++IE
Subjt:  VAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRIIGKLIAERSKEADVYAMSYEPRKDERIE

AT5G27820.1 Ribosomal L18p/L5e family protein4.4e-0835Show/hide
Query:  YMRPFLLNVFFSKKFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRIIGKLIAERSKEADVYAMSYEPRKDER
        Y++P++L + F+ KFVHA+V+H  T+ V   A++  K LR ++    D  A   IGK++ ER    D+ A++ + +K++R
Subjt:  YMRPFLLNVFFSKKFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRIIGKLIAERSKEADVYAMSYEPRKDER


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGCTCTCGTTTAAATTCCCGTGGATGGGTTACTATTTTGGCAAGGTCAATATAGGAACGCAAGTCACCTTCCCCCGGATGCTCTTTCCTCACTCTTTTCTCCCAAC
CTTCAATCTATCCATATCCTACCCTGTCTTCCTCCAGCTAAGTTTCTCCATTGTTTCAGACTTCATCTTCTTCGGGGATTCCAAGGAGACTTTGCATGATGAGGAAGTAA
TTAAAAACCATGAGGATGCCGTCTTTATTGTTAATTCGGATGAGACACTGGATCAGCAGCAAAGTAATTCATTTGAATTATTGGATCAACAGCAAGATATGAACACGGTT
CAGAAAACTAATAATTTCGGTGTGGTTGGGAATCCCTCTTTGTCAAATTATTTGGGTCCTTCAATTCCATCGAGTGTCAAAGAAGTATGTGACAATTTCTGCGAATCATA
TCCCAATTTTTATGTGCTTAAGAAAGGGCTAGGTGTGGAATGTGACGTTTCAGTGGTTAATGCTGATGTTCTGGAGGAAGTTGTTTCTAAGGGTCTTAAATTGAATTGGG
CAAAGTATTTGATTTGTGGAATTAATATTGATGATCAAAAGGTGTTGGAGGTTTCCTCCAGACTTGATGGTAAGATGGAGCTTCTTCCGATTATGTATCTTGGTCTTTCA
TTGGGTGGCCATCCAAATTCCATTACTTTTTGGCTACCGGTTTTGGATAAGATATTGGATGAAGAAATTGTGAACTTGCAAATTTTGTTAGGTGTTTTGGATTCTTGGGT
TGTTGGTTCTTCTGAAGATGTTCGAGTTTGGTCTCTTGAAAGTTCTGGTATTCGAGTTTGGTCTCTTGAAAATTCTGGTCAGTTTTCAGTTAGTTCTTTGACACGTCACA
TTGTTTTGGCTTGGACAAGAAGGTCTCGAGGGGAGGTGGCAAAGCGACCGAACAAGAAATCATGGAAACAAAGGACAGATATGTATATGAGGCCATTTTTACTGAATGTT
TTCTTTTCGAAGAAATTTGTCCATGCTAAGGTAATGCATAGAGGAACAAGCAAAGTGATATCAGTGGCAACAACCAATGCAAAGGATCTCAGGAACAGTCTACCATCACT
CACGGATCATAATGCATGTAGAATAATAGGGAAGCTTATTGCAGAGAGATCAAAGGAAGCAGATGTATATGCGATGTCGTACGAGCCTAGGAAGGATGAAAGAATTGAAG
CCACCCGTTTCTCAGCCGCCGTCGTTGCCCAGCCTCCCGTCGCTCAGCCGCCATACATCGCCCAGCCAAAACTGAACTTAATTACCATTCAGTCGAGGATCCAAGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCGCTCTCGTTTAAATTCCCGTGGATGGGTTACTATTTTGGCAAGGTCAATATAGGAACGCAAGTCACCTTCCCCCGGATGCTCTTTCCTCACTCTTTTCTCCCAAC
CTTCAATCTATCCATATCCTACCCTGTCTTCCTCCAGCTAAGTTTCTCCATTGTTTCAGACTTCATCTTCTTCGGGGATTCCAAGGAGACTTTGCATGATGAGGAAGTAA
TTAAAAACCATGAGGATGCCGTCTTTATTGTTAATTCGGATGAGACACTGGATCAGCAGCAAAGTAATTCATTTGAATTATTGGATCAACAGCAAGATATGAACACGGTT
CAGAAAACTAATAATTTCGGTGTGGTTGGGAATCCCTCTTTGTCAAATTATTTGGGTCCTTCAATTCCATCGAGTGTCAAAGAAGTATGTGACAATTTCTGCGAATCATA
TCCCAATTTTTATGTGCTTAAGAAAGGGCTAGGTGTGGAATGTGACGTTTCAGTGGTTAATGCTGATGTTCTGGAGGAAGTTGTTTCTAAGGGTCTTAAATTGAATTGGG
CAAAGTATTTGATTTGTGGAATTAATATTGATGATCAAAAGGTGTTGGAGGTTTCCTCCAGACTTGATGGTAAGATGGAGCTTCTTCCGATTATGTATCTTGGTCTTTCA
TTGGGTGGCCATCCAAATTCCATTACTTTTTGGCTACCGGTTTTGGATAAGATATTGGATGAAGAAATTGTGAACTTGCAAATTTTGTTAGGTGTTTTGGATTCTTGGGT
TGTTGGTTCTTCTGAAGATGTTCGAGTTTGGTCTCTTGAAAGTTCTGGTATTCGAGTTTGGTCTCTTGAAAATTCTGGTCAGTTTTCAGTTAGTTCTTTGACACGTCACA
TTGTTTTGGCTTGGACAAGAAGGTCTCGAGGGGAGGTGGCAAAGCGACCGAACAAGAAATCATGGAAACAAAGGACAGATATGTATATGAGGCCATTTTTACTGAATGTT
TTCTTTTCGAAGAAATTTGTCCATGCTAAGGTAATGCATAGAGGAACAAGCAAAGTGATATCAGTGGCAACAACCAATGCAAAGGATCTCAGGAACAGTCTACCATCACT
CACGGATCATAATGCATGTAGAATAATAGGGAAGCTTATTGCAGAGAGATCAAAGGAAGCAGATGTATATGCGATGTCGTACGAGCCTAGGAAGGATGAAAGAATTGAAG
CCACCCGTTTCTCAGCCGCCGTCGTTGCCCAGCCTCCCGTCGCTCAGCCGCCATACATCGCCCAGCCAAAACTGAACTTAATTACCATTCAGTCGAGGATCCAAGAGTAG
Protein sequenceShow/hide protein sequence
MPLSFKFPWMGYYFGKVNIGTQVTFPRMLFPHSFLPTFNLSISYPVFLQLSFSIVSDFIFFGDSKETLHDEEVIKNHEDAVFIVNSDETLDQQQSNSFELLDQQQDMNTV
QKTNNFGVVGNPSLSNYLGPSIPSSVKEVCDNFCESYPNFYVLKKGLGVECDVSVVNADVLEEVVSKGLKLNWAKYLICGINIDDQKVLEVSSRLDGKMELLPIMYLGLS
LGGHPNSITFWLPVLDKILDEEIVNLQILLGVLDSWVVGSSEDVRVWSLESSGIRVWSLENSGQFSVSSLTRHIVLAWTRRSRGEVAKRPNKKSWKQRTDMYMRPFLLNV
FFSKKFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRIIGKLIAERSKEADVYAMSYEPRKDERIEATRFSAAVVAQPPVAQPPYIAQPKLNLITIQSRIQE