CuGenDBv2

Gene ID	Lag0030475
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic
Genome location	chr8:47537117..47537634
RNA-Seq Expression	Lag0030475
Synteny	Lag0030475
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7033428.1 hypothetical protein SDJN02_07484 [Cucurbita argyrosperma subsp. argyrosperma]

4.3e-39

63.38

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Query:  MAWCCSCASKSNNSI--FPFPPHRHRLLP-NKSKSKSSNISFAAAAISSLSKRCQKCGGKGAIDCPGCKVTHPISILNSQFSILNSSASSSLSSLWFQGT
        MAWC S  SKSNNS   FPFPPH   +LP NK +SK SNI FAAA   SL KRCQ CGGKGAIDCPGCK                             GT
Subjt:  MAWCCSCASKSNNSI--FPFPPHRHRLLP-NKSKSKSSNISFAAAAISSLSKRCQKCGGKGAIDCPGCKVTHPISILNSQFSILNSSASSSLSSLWFQGT

Query:  GKNKKNGNIFERWKCFECQGFGLKSCPACGNGGLTPEQRGER
        G+NKKNGNIFERWKCFECQGFGLKSCP CG GGLTPEQRGER
Subjt:  GKNKKNGNIFERWKCFECQGFGLKSCPACGNGGLTPEQRGER

XP_022152486.1 uncharacterized protein LOC111020203 [Momordica charantia]

4.3e-39

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Query:  MERGMAWCCSCASKSNNSIFPF----PPHRHRLL---PNKSKSKSSNISFAAAAISSLSKRCQKCGGKGAIDCPGCKVTHPISILNSQFSILNSSASSSL
        ME G    CSC+S + N+IFPF    PP  HRLL   PNK K + SNISF AAA  SL KRCQKCGGKGAIDCPGCK                       
Subjt:  MERGMAWCCSCASKSNNSIFPF----PPHRHRLL---PNKSKSKSSNISFAAAAISSLSKRCQKCGGKGAIDCPGCKVTHPISILNSQFSILNSSASSSL

Query:  SSLWFQGTGKNKKNGNIFERWKCFECQGFGLKSCPACGNGGLTPEQRGER
              GTGKNKKNGNIFERWKCFECQGFGLKSCP CGNGGLTPEQRGER
Subjt:  SSLWFQGTGKNKKNGNIFERWKCFECQGFGLKSCPACGNGGLTPEQRGER

XP_022963874.1 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic [Cucurbita moschata]

4.3e-39

63.38

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Query:  MAWCCSCASKSNNSI--FPFPPHRHRLLP-NKSKSKSSNISFAAAAISSLSKRCQKCGGKGAIDCPGCKVTHPISILNSQFSILNSSASSSLSSLWFQGT
        MAWC S  SKSNNS   FPFPPH   +LP NK +SK SNI FAAA   SL KRCQ CGGKGAIDCPGCK                             GT
Subjt:  MAWCCSCASKSNNSI--FPFPPHRHRLLP-NKSKSKSSNISFAAAAISSLSKRCQKCGGKGAIDCPGCKVTHPISILNSQFSILNSSASSSLSSLWFQGT

Query:  GKNKKNGNIFERWKCFECQGFGLKSCPACGNGGLTPEQRGER
        G+NKKNGNIFERWKCFECQGFGLKSCP CG GGLTPEQRGER
Subjt:  GKNKKNGNIFERWKCFECQGFGLKSCPACGNGGLTPEQRGER

XP_022990183.1 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic [Cucurbita maxima]

9.6e-39

63.38

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Query:  MAWCCSCASKSNNSI--FPFPPHRHRLLP-NKSKSKSSNISFAAAAISSLSKRCQKCGGKGAIDCPGCKVTHPISILNSQFSILNSSASSSLSSLWFQGT
        MAWC S  SKSNNS   FPFPPH   +LP NKS+SK SNI FAAA   SL KRCQ CGGKGAIDC GCK                             GT
Subjt:  MAWCCSCASKSNNSI--FPFPPHRHRLLP-NKSKSKSSNISFAAAAISSLSKRCQKCGGKGAIDCPGCKVTHPISILNSQFSILNSSASSSLSSLWFQGT

Query:  GKNKKNGNIFERWKCFECQGFGLKSCPACGNGGLTPEQRGER
        G+NKKNGNIFERWKCFECQGFGLKSCP CG GGLTPEQRGER
Subjt:  GKNKKNGNIFERWKCFECQGFGLKSCPACGNGGLTPEQRGER

XP_023521952.1 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic-like [Cucurbita pepo subsp. pepo]

1.1e-39

64.08

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Query:  MAWCCSCASKSNNSI--FPFPPHRHRLLP-NKSKSKSSNISFAAAAISSLSKRCQKCGGKGAIDCPGCKVTHPISILNSQFSILNSSASSSLSSLWFQGT
        MAWC S  SKSNNS   FPFPPH   +LP NKS+SK SNI FAAA   SL KRCQ CGGKGAIDCPGCK                             GT
Subjt:  MAWCCSCASKSNNSI--FPFPPHRHRLLP-NKSKSKSSNISFAAAAISSLSKRCQKCGGKGAIDCPGCKVTHPISILNSQFSILNSSASSSLSSLWFQGT

Query:  GKNKKNGNIFERWKCFECQGFGLKSCPACGNGGLTPEQRGER
        G+NKKNGNIFERWKCFECQGFGLKSCP CG GGLTPEQRGER
Subjt:  GKNKKNGNIFERWKCFECQGFGLKSCPACGNGGLTPEQRGER

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LIM5 Uncharacterized protein

1.5e-29

54.89

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Query:  ASKSNNSIFPFPPHRHRLLPNKSKSKSSNISFAAAAISS-LSKRCQKCGGKGAIDCPGCKVTHPISILNSQFSILNSSASSSLSSLWFQGTGKNKKNGNI
        A+ ++ +IFPFP ++      KS      + FAA   S+ L KRCQKCGGKGAIDCPGCK                             GTGKNKKNGNI
Subjt:  ASKSNNSIFPFPPHRHRLLPNKSKSKSSNISFAAAAISS-LSKRCQKCGGKGAIDCPGCKVTHPISILNSQFSILNSSASSSLSSLWFQGTGKNKKNGNI

Query:  FERWKCFECQGFGLKSCPACGNGGLTPEQRGER
        FERWKCFECQGFGLKSCP CG GGLTPEQRGER
Subjt:  FERWKCFECQGFGLKSCPACGNGGLTPEQRGER

A0A1S3C9W1 protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic

3.3e-29

54.48

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Query:  ASKSNNSIFPFPPHRHRLLPNKSKSKSS-NISFAAAAISS-LSKRCQKCGGKGAIDCPGCKVTHPISILNSQFSILNSSASSSLSSLWFQGTGKNKKNGN
        ++ ++ +IFPFP   ++++ +K+KS  +  + FAA   S+ L KRCQKCGGKGAIDCPGCK                             GTGKNKKNGN
Subjt:  ASKSNNSIFPFPPHRHRLLPNKSKSKSS-NISFAAAAISS-LSKRCQKCGGKGAIDCPGCKVTHPISILNSQFSILNSSASSSLSSLWFQGTGKNKKNGN

Query:  IFERWKCFECQGFGLKSCPACGNGGLTPEQRGER
        IFERWKCFECQGFGLKSCP CG GGLTPEQRGER
Subjt:  IFERWKCFECQGFGLKSCPACGNGGLTPEQRGER

A0A6J1DHW0 uncharacterized protein LOC111020203

2.1e-39

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Query:  MERGMAWCCSCASKSNNSIFPF----PPHRHRLL---PNKSKSKSSNISFAAAAISSLSKRCQKCGGKGAIDCPGCKVTHPISILNSQFSILNSSASSSL
        ME G    CSC+S + N+IFPF    PP  HRLL   PNK K + SNISF AAA  SL KRCQKCGGKGAIDCPGCK                       
Subjt:  MERGMAWCCSCASKSNNSIFPF----PPHRHRLL---PNKSKSKSSNISFAAAAISSLSKRCQKCGGKGAIDCPGCKVTHPISILNSQFSILNSSASSSL

Query:  SSLWFQGTGKNKKNGNIFERWKCFECQGFGLKSCPACGNGGLTPEQRGER
              GTGKNKKNGNIFERWKCFECQGFGLKSCP CGNGGLTPEQRGER
Subjt:  SSLWFQGTGKNKKNGNIFERWKCFECQGFGLKSCPACGNGGLTPEQRGER

A0A6J1HLG5 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic

2.1e-39

63.38

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Query:  MAWCCSCASKSNNSI--FPFPPHRHRLLP-NKSKSKSSNISFAAAAISSLSKRCQKCGGKGAIDCPGCKVTHPISILNSQFSILNSSASSSLSSLWFQGT
        MAWC S  SKSNNS   FPFPPH   +LP NK +SK SNI FAAA   SL KRCQ CGGKGAIDCPGCK                             GT
Subjt:  MAWCCSCASKSNNSI--FPFPPHRHRLLP-NKSKSKSSNISFAAAAISSLSKRCQKCGGKGAIDCPGCKVTHPISILNSQFSILNSSASSSLSSLWFQGT

Query:  GKNKKNGNIFERWKCFECQGFGLKSCPACGNGGLTPEQRGER
        G+NKKNGNIFERWKCFECQGFGLKSCP CG GGLTPEQRGER
Subjt:  GKNKKNGNIFERWKCFECQGFGLKSCPACGNGGLTPEQRGER

A0A6J1JSI3 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic

4.6e-39

63.38

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Query:  MAWCCSCASKSNNSI--FPFPPHRHRLLP-NKSKSKSSNISFAAAAISSLSKRCQKCGGKGAIDCPGCKVTHPISILNSQFSILNSSASSSLSSLWFQGT
        MAWC S  SKSNNS   FPFPPH   +LP NKS+SK SNI FAAA   SL KRCQ CGGKGAIDC GCK                             GT
Subjt:  MAWCCSCASKSNNSI--FPFPPHRHRLLP-NKSKSKSSNISFAAAAISSLSKRCQKCGGKGAIDCPGCKVTHPISILNSQFSILNSSASSSLSSLWFQGT

Query:  GKNKKNGNIFERWKCFECQGFGLKSCPACGNGGLTPEQRGER
        G+NKKNGNIFERWKCFECQGFGLKSCP CG GGLTPEQRGER
Subjt:  GKNKKNGNIFERWKCFECQGFGLKSCPACGNGGLTPEQRGER

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G22630.1 unknown protein

3.4e-26

54.64

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Query:  AISSLSKRCQKCGGKGAIDCPGCKVTHPISILNSQFSILNSSASSSLSSLWFQGTGKNKKNGNIFERWKCFECQGFGLKSCPACGNGGLTPEQRGER
        ++ S+ K C+ CG KGAI+CPGCK                             GTGKNKKNGN+FERWKCF+CQGFG+KSCP CG GGLTPEQRGER
Subjt:  AISSLSKRCQKCGGKGAIDCPGCKVTHPISILNSQFSILNSSASSSLSSLWFQGTGKNKKNGNIFERWKCFECQGFGLKSCPACGNGGLTPEQRGER

Sequences

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CDS sequence

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ATGGAAAGAGGGATGGCGTGGTGTTGCAGCTGTGCCTCAAAGAGTAACAACAGCATCTTCCCATTCCCGCCTCATCGGCATCGACTGCTGCCAAATAAGAGTAAAAGTAA
ATCATCCAACATCTCCTTCGCCGCAGCGGCAATATCTTCGCTGTCCAAAAGATGCCAAAAGTGTGGAGGTAAAGGGGCCATCGATTGTCCTGGATGCAAGGTCACCCATC
CCATCTCAATTCTCAATTCTCAATTCTCAATTCTCAATTCATCTGCATCTTCTTCACTATCTTCTCTTTGGTTTCAGGGGACTGGCAAAAACAAGAAAAACGGAAACATC
TTCGAGCGTTGGAAATGTTTCGAGTGTCAAGGATTCGGATTAAAGAGCTGCCCTGCATGTGGAAACGGAGGACTCACCCCCGAACAAAGGGGAGAAAGATAA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MERGMAWCCSCASKSNNSIFPFPPHRHRLLPNKSKSKSSNISFAAAAISSLSKRCQKCGGKGAIDCPGCKVTHPISILNSQFSILNSSASSSLSSLWFQGTGKNKKNGNI
FERWKCFECQGFGLKSCPACGNGGLTPEQRGER

Lag0030475 (gene) of Sponge gourd (AG-4) v1 genome