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Lag0030645 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0030645
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein TOPLESS
Genome locationchr11:51099..52369
RNA-Seq ExpressionLag0030645
SyntenyLag0030645
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR027728 - Topless family
IPR036322 - WD40-repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036524.1 Protein TOPLESS [Cucurbita argyrosperma subsp. argyrosperma]5.4e-2345.4Show/hide
Query:  KVNLPVNVLPVSFADHGH--------DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQ-------
        +VNLPVNVLPVSFA HGH        DL K VMRTLNQGSSPM MDFHPVQQTLLLV                                +P Q       
Subjt:  KVNLPVNVLPVSFADHGH--------DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQ-------

Query:  ------------------AHCSNI--LLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV
                          A+  +I  + S+  G  L+   EIDAH+GGVNDLAFSNPNKQLCV+  GDD  IKV
Subjt:  ------------------AHCSNI--LLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV

KVH98059.1 CTLH, C-terminal LisH motif-containing protein [Cynara cardunculus var. scolymus]1.4e-2349.66Show/hide
Query:  MKVNLPVNVLPVSFADHG---------HDLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQAHCSN
        M+VNLP+NV+PVSF  HG          DL KTV RTLNQGSSPM MDFHP+QQTLLLV                                +P QA    
Subjt:  MKVNLPVNVLPVSFADHG---------HDLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQAHCSN

Query:  ILLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV
          L  D G++   VN IDAH+GGVNDLAFS+PNKQLCV+  GDD  IKV
Subjt:  ILLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV

XP_022153396.1 protein TOPLESS [Momordica charantia]3.1e-2345.4Show/hide
Query:  KVNLPVNVLPVSFADHGH--------DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQ-------
        +VNLPVNVLPVSFA HGH        DL KTV+RTLNQGSSPM MDFHPVQQTLLLV                                +P Q       
Subjt:  KVNLPVNVLPVSFADHGH--------DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQ-------

Query:  ------------------AHCSNI--LLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV
                          A+  +I  + S+  G  L+   EIDAH+GGVNDLAFSNPNKQLCV+  GDD  IKV
Subjt:  ------------------AHCSNI--LLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV

XP_022997768.1 protein TOPLESS-like [Cucurbita maxima]5.4e-2345.4Show/hide
Query:  KVNLPVNVLPVSFADHGH--------DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQ-------
        +VNLPVNVLPVSFA HGH        DL K VMRTLNQGSSPM MDFHPVQQTLLLV                                +P Q       
Subjt:  KVNLPVNVLPVSFADHGH--------DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQ-------

Query:  ------------------AHCSNI--LLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV
                          A+  +I  + S+  G  L+   EIDAH+GGVNDLAFSNPNKQLCV+  GDD  IKV
Subjt:  ------------------AHCSNI--LLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV

XP_023523502.1 protein TOPLESS [Cucurbita pepo subsp. pepo]5.4e-2345.4Show/hide
Query:  KVNLPVNVLPVSFADHGH--------DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQ-------
        +VNLPVNVLPVSFA HGH        DL K VMRTLNQGSSPM MDFHPVQQTLLLV                                +P Q       
Subjt:  KVNLPVNVLPVSFADHGH--------DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQ-------

Query:  ------------------AHCSNI--LLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV
                          A+  +I  + S+  G  L+   EIDAH+GGVNDLAFSNPNKQLCV+  GDD  IKV
Subjt:  ------------------AHCSNI--LLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV

TrEMBL top hitse value%identityAlignment
A0A103XWC1 CTLH, C-terminal LisH motif-containing protein6.8e-2449.66Show/hide
Query:  MKVNLPVNVLPVSFADHG---------HDLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQAHCSN
        M+VNLP+NV+PVSF  HG          DL KTV RTLNQGSSPM MDFHP+QQTLLLV                                +P QA    
Subjt:  MKVNLPVNVLPVSFADHG---------HDLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQAHCSN

Query:  ILLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV
          L  D G++   VN IDAH+GGVNDLAFS+PNKQLCV+  GDD  IKV
Subjt:  ILLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV

A0A1S3BY14 protein TOPLESS7.6e-2344.25Show/hide
Query:  KVNLPVNVLPVSFADHGH--------DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQ-------
        +VNLPVNVLPVSFA HGH        DL KTVMRTLNQGSSP  MDFHP+QQTLLLV                                +P Q       
Subjt:  KVNLPVNVLPVSFADHGH--------DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQ-------

Query:  ------------------AHCSNI--LLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV
                          A+  +I  + S+  G  ++   EIDAH+GGVNDLAFSNPNKQLCV+  GDD  IKV
Subjt:  ------------------AHCSNI--LLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV

A0A6J1DKI7 protein TOPLESS1.5e-2345.4Show/hide
Query:  KVNLPVNVLPVSFADHGH--------DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQ-------
        +VNLPVNVLPVSFA HGH        DL KTV+RTLNQGSSPM MDFHPVQQTLLLV                                +P Q       
Subjt:  KVNLPVNVLPVSFADHGH--------DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQ-------

Query:  ------------------AHCSNI--LLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV
                          A+  +I  + S+  G  L+   EIDAH+GGVNDLAFSNPNKQLCV+  GDD  IKV
Subjt:  ------------------AHCSNI--LLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV

A0A6J1GAU7 protein TOPLESS-like2.6e-2345.4Show/hide
Query:  KVNLPVNVLPVSFADHGH--------DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQ-------
        +VNLPVNVLPVSFA HGH        DL K VMRTLNQGSSPM MDFHPVQQTLLLV                                +P Q       
Subjt:  KVNLPVNVLPVSFADHGH--------DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQ-------

Query:  ------------------AHCSNI--LLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV
                          A+  +I  + S+  G  L+   EIDAH+GGVNDLAFSNPNKQLCV+  GDD  IKV
Subjt:  ------------------AHCSNI--LLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV

A0A6J1KEV5 protein TOPLESS-like2.6e-2345.4Show/hide
Query:  KVNLPVNVLPVSFADHGH--------DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQ-------
        +VNLPVNVLPVSFA HGH        DL K VMRTLNQGSSPM MDFHPVQQTLLLV                                +P Q       
Subjt:  KVNLPVNVLPVSFADHGH--------DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQ-------

Query:  ------------------AHCSNI--LLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV
                          A+  +I  + S+  G  L+   EIDAH+GGVNDLAFSNPNKQLCV+  GDD  IKV
Subjt:  ------------------AHCSNI--LLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV

SwissProt top hitse value%identityAlignment
Q0J7U6 Protein TOPLESS-RELATED PROTEIN 23.4e-1235.98Show/hide
Query:  VSFADHGH--------DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQA--------HCSNILLS
        VSF+   H        DL K V+R LNQGS+ M +DFHPVQQT+LLV                                LP QA          +  L S
Subjt:  VSFADHGH--------DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQA--------HCSNILLS

Query:  WDHGM-----------TLKFV--------NEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV
         D  +           T  FV         EIDAH+GGVND+AFS+PNK L ++  GDD  IKV
Subjt:  WDHGM-----------TLKFV--------NEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV

Q0WV90 Topless-related protein 11.1e-1838.64Show/hide
Query:  KVNLPVNVLPVSFAD--HGH--------DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQ-----
        +V+L VN+LP++F    HGH        DL KTV RTL+QGSSPM MDFHP++QTLLLV                                +P Q     
Subjt:  KVNLPVNVLPVSFAD--HGH--------DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQ-----

Query:  --------------------AHCSNI--LLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV
                            A+  +I  L S+  G  ++   EIDAH+GGVND+AFS PNKQLCV   GDD  IKV
Subjt:  --------------------AHCSNI--LLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV

Q10NY2 Protein TPR37.0e-1837.06Show/hide
Query:  KVNLPVNVLPVSF-ADHGH---DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV-----------------------------------------------
        +VNLPVN+LPV++   H +   D  K V RTL+QGS+PM MDFHPVQQTLLLV                                               
Subjt:  KVNLPVNVLPVSF-ADHGH---DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV-----------------------------------------------

Query:  ----------LPTQAHCSNI--LLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV
                  L   A+  +I  + S+  G  ++   EIDAH+GGVND+AF++PNKQLC++  GDD  IKV
Subjt:  ----------LPTQAHCSNI--LLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV

Q27GK7 Topless-related protein 44.3e-1536.05Show/hide
Query:  NLPVNVLPVSFADHGH--------DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV---------------------------------------------
        NLPVNVLPV++    H        DL K V R L+QGS+   MDFHPVQQT+LLV                                             
Subjt:  NLPVNVLPVSFADHGH--------DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV---------------------------------------------

Query:  ------------LPTQAHCSNI--LLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV
                    L   A+  +I  + S+  G  L+   EIDAH G VNDLAFS PN+QLCVV  G+D  IKV
Subjt:  ------------LPTQAHCSNI--LLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV

Q94AI7 Protein TOPLESS7.5e-2039.2Show/hide
Query:  KVNLPVNVLPVSFAD--HGH--------DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQ-----
        +VNL VN+LP+SF+   HGH        DL KTV RTL+QGSSPM MDFHP++QTLLLV                                +P Q     
Subjt:  KVNLPVNVLPVSFAD--HGH--------DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQ-----

Query:  --------------------AHCSNI--LLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV
                            A+  +I  L S+  G  ++   EIDAH+GGVND++FS PNKQLCV+  GDD  IKV
Subjt:  --------------------AHCSNI--LLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV

Arabidopsis top hitse value%identityAlignment
AT1G15750.1 Transducin family protein / WD-40 repeat family protein5.3e-2139.2Show/hide
Query:  KVNLPVNVLPVSFAD--HGH--------DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQ-----
        +VNL VN+LP+SF+   HGH        DL KTV RTL+QGSSPM MDFHP++QTLLLV                                +P Q     
Subjt:  KVNLPVNVLPVSFAD--HGH--------DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQ-----

Query:  --------------------AHCSNI--LLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV
                            A+  +I  L S+  G  ++   EIDAH+GGVND++FS PNKQLCV+  GDD  IKV
Subjt:  --------------------AHCSNI--LLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV

AT1G15750.2 Transducin family protein / WD-40 repeat family protein5.3e-2139.2Show/hide
Query:  KVNLPVNVLPVSFAD--HGH--------DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQ-----
        +VNL VN+LP+SF+   HGH        DL KTV RTL+QGSSPM MDFHP++QTLLLV                                +P Q     
Subjt:  KVNLPVNVLPVSFAD--HGH--------DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQ-----

Query:  --------------------AHCSNI--LLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV
                            A+  +I  L S+  G  ++   EIDAH+GGVND++FS PNKQLCV+  GDD  IKV
Subjt:  --------------------AHCSNI--LLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV

AT1G15750.3 Transducin family protein / WD-40 repeat family protein5.3e-2139.2Show/hide
Query:  KVNLPVNVLPVSFAD--HGH--------DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQ-----
        +VNL VN+LP+SF+   HGH        DL KTV RTL+QGSSPM MDFHP++QTLLLV                                +P Q     
Subjt:  KVNLPVNVLPVSFAD--HGH--------DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQ-----

Query:  --------------------AHCSNI--LLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV
                            A+  +I  L S+  G  ++   EIDAH+GGVND++FS PNKQLCV+  GDD  IKV
Subjt:  --------------------AHCSNI--LLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV

AT1G15750.4 Transducin family protein / WD-40 repeat family protein5.3e-2139.2Show/hide
Query:  KVNLPVNVLPVSFAD--HGH--------DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQ-----
        +VNL VN+LP+SF+   HGH        DL KTV RTL+QGSSPM MDFHP++QTLLLV                                +P Q     
Subjt:  KVNLPVNVLPVSFAD--HGH--------DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQ-----

Query:  --------------------AHCSNI--LLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV
                            A+  +I  L S+  G  ++   EIDAH+GGVND++FS PNKQLCV+  GDD  IKV
Subjt:  --------------------AHCSNI--LLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV

AT1G80490.1 TOPLESS-related 17.7e-2038.64Show/hide
Query:  KVNLPVNVLPVSFAD--HGH--------DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQ-----
        +V+L VN+LP++F    HGH        DL KTV RTL+QGSSPM MDFHP++QTLLLV                                +P Q     
Subjt:  KVNLPVNVLPVSFAD--HGH--------DLSKTVMRTLNQGSSPMCMDFHPVQQTLLLV--------------------------------LPTQ-----

Query:  --------------------AHCSNI--LLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV
                            A+  +I  L S+  G  ++   EIDAH+GGVND+AFS PNKQLCV   GDD  IKV
Subjt:  --------------------AHCSNI--LLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTAAATCTACCGGTTAATGTTCTACCCGTATCATTTGCGGATCATGGTCATGATTTGTCAAAGACTGTTATGCGAACACTGAATCAAGGGTCATCTCCAATGTG
CATGGATTTTCATCCAGTCCAACAAACTCTGCTATTGGTATTGCCTACTCAAGCACATTGTTCAAATATACTCCTTTCATGGGATCATGGCATGACACTAAAATTTGTGA
ATGAGATTGATGCTCATCTCGGTGGAGTTAATGATCTAGCTTTCTCCAATCCCAATAAACAACTTTGTGTCGTAATGGGTGGGGATGACATGGCCATTAAAGTCATGAGG
CTCATGTTTTCTCTTTTTGCCCCAACTACAGGGAAAACATTCAGTGTTGGTGCACAGCGATGGCTTATATTGAAGATGGTATGTGGCTCTTCTCTTGTGGGACAAGTAAA
GATAGAGAGTCTTATATTGTTGAGTGAAATGAGAGTGAAGGAGCAGTTAAGAGAACTTACCAAGGGTTCCTCAAGCGGTCTCTGGGTGCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGTAAATCTACCGGTTAATGTTCTACCCGTATCATTTGCGGATCATGGTCATGATTTGTCAAAGACTGTTATGCGAACACTGAATCAAGGGTCATCTCCAATGTG
CATGGATTTTCATCCAGTCCAACAAACTCTGCTATTGGTATTGCCTACTCAAGCACATTGTTCAAATATACTCCTTTCATGGGATCATGGCATGACACTAAAATTTGTGA
ATGAGATTGATGCTCATCTCGGTGGAGTTAATGATCTAGCTTTCTCCAATCCCAATAAACAACTTTGTGTCGTAATGGGTGGGGATGACATGGCCATTAAAGTCATGAGG
CTCATGTTTTCTCTTTTTGCCCCAACTACAGGGAAAACATTCAGTGTTGGTGCACAGCGATGGCTTATATTGAAGATGGTATGTGGCTCTTCTCTTGTGGGACAAGTAAA
GATAGAGAGTCTTATATTGTTGAGTGAAATGAGAGTGAAGGAGCAGTTAAGAGAACTTACCAAGGGTTCCTCAAGCGGTCTCTGGGTGCTGTAA
Protein sequenceShow/hide protein sequence
MKVNLPVNVLPVSFADHGHDLSKTVMRTLNQGSSPMCMDFHPVQQTLLLVLPTQAHCSNILLSWDHGMTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDMAIKVMR
LMFSLFAPTTGKTFSVGAQRWLILKMVCGSSLVGQVKIESLILLSEMRVKEQLRELTKGSSSGLWVL