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Lag0030646 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0030646
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein TOPLESS
Genome locationchr11:52432..52898
RNA-Seq ExpressionLag0030646
SyntenyLag0030646
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009791 - post-embryonic development (biological process)
GO:0048367 - shoot system development (biological process)
GO:0048608 - reproductive structure development (biological process)
InterPro domainsIPR027728 - Topless family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018371.1 Protein TOPLESS [Cucurbita argyrosperma subsp. argyrosperma]2.0e-2471.43Show/hide
Query:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLISTATCSVGLA
        MDNVQLL TVDADGG+    PASP I FNKD  L AVS NENGIKILANVDG++LL+ FENLSYDASRTSEAG KPT+N IS A      A
Subjt:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLISTATCSVGLA

PON51665.1 Topless-like WD40 repeat containing protein [Parasponia andersonii]2.3e-2570.21Show/hide
Query:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLISTATCSVGLAERA
        MDNVQLL TVDADGG+    PASP I FNKD +L AVS+N+NGIK+LAN DG++LL+ FENLSYDASRTSEA  KPTV+ IS A  S GL+ERA
Subjt:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLISTATCSVGLAERA

XP_022955701.1 protein TOPLESS [Cucurbita moschata]2.0e-2471.43Show/hide
Query:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLISTATCSVGLA
        MDNVQLL TVDADGG+    PASP I FNKD  L AVS NENGIKILANVDG++LL+ FENLSYDASRTSEAG KPT+N IS A      A
Subjt:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLISTATCSVGLA

XP_022980163.1 protein TOPLESS [Cucurbita maxima]2.0e-2471.43Show/hide
Query:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLISTATCSVGLA
        MDNVQLL TVDADGG+    PASP I FNKD  L AVS NENGIKILANVDG++LL+ FENLSYDASRTSEAG KPT+N IS A      A
Subjt:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLISTATCSVGLA

XP_023526905.1 protein TPR3-like [Cucurbita pepo subsp. pepo]2.0e-2471.43Show/hide
Query:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLISTATCSVGLA
        MDNVQLL TVDADGG+    PASP I FNKD  L AVS NENGIKILANVDG++LL+ FENLSYDASRTSEAG KPT+N IS A      A
Subjt:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLISTATCSVGLA

TrEMBL top hitse value%identityAlignment
A0A0A0KTH7 Uncharacterized protein1.6e-2471.43Show/hide
Query:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLISTATCSVGLA
        MDNVQLL TVDADGG+    PASP I FNKD  L AVS NENGIKILANVDGI+LL+ FENLSYDA+RTSEAG KPT+N IS A      A
Subjt:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLISTATCSVGLA

A0A2P5BSC8 Topless-like WD40 repeat containing protein1.1e-2570.21Show/hide
Query:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLISTATCSVGLAERA
        MDNVQLL TVDADGG+    PASP I FNKD +L AVS+N+NGIK+LAN DG++LL+ FENLSYDASRTSEA  KPTV+ IS A  S GL+ERA
Subjt:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLISTATCSVGLAERA

A0A6J1DKI7 protein TOPLESS2.1e-2471.43Show/hide
Query:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLISTATCSVGLA
        MDNVQLL TVDA+GG+    PASP I FNKD  L AVS NENGIKILANVDGI+LL+ FENLSYDASRTSEAG KPT+N IS A      A
Subjt:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLISTATCSVGLA

A0A6J1GUK9 protein TOPLESS9.5e-2571.43Show/hide
Query:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLISTATCSVGLA
        MDNVQLL TVDADGG+    PASP I FNKD  L AVS NENGIKILANVDG++LL+ FENLSYDASRTSEAG KPT+N IS A      A
Subjt:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLISTATCSVGLA

A0A6J1IYH0 protein TOPLESS9.5e-2571.43Show/hide
Query:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLISTATCSVGLA
        MDNVQLL TVDADGG+    PASP I FNKD  L AVS NENGIKILANVDG++LL+ FENLSYDASRTSEAG KPT+N IS A      A
Subjt:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLISTATCSVGLA

SwissProt top hitse value%identityAlignment
Q0J7U6 Protein TOPLESS-RELATED PROTEIN 23.6e-1345.78Show/hide
Query:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLIST
        MDN  +L T D DGG+    PASP + FN++ +L AV++NENGIKILAN DG +LL+  E+ +Y+ SR     I     +++T
Subjt:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLIST

Q0WV90 Topless-related protein 16.2e-1349.38Show/hide
Query:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLI
        MD +QLL  +DADGG+     ASP I FNK+ +L AVS+N+N IK++AN DG++LL   ENLS ++S       KP +N I
Subjt:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLI

Q10NY2 Protein TPR31.7e-1852.63Show/hide
Query:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRT-SEAGIKPTVNLISTATCSVGLAERA
        MDN  LL T+DADGG+    PASP + FNK+  L AVS++ENGIKILAN DG++LL+  EN S+DASR+ SE   KP +N ++ A  +   A  A
Subjt:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRT-SEAGIKPTVNLISTATCSVGLAERA

Q94AI7 Protein TOPLESS5.6e-1447.96Show/hide
Query:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLISTATC----SVGLAERA
        MD VQLL  +D DGG+     ASP I FNK+ +L AVS NEN IKI+AN DG++LL  FEN+S ++S       KP +N I+ A      S G A+R+
Subjt:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLISTATC----SVGLAERA

Q9LRZ0 Topless-related protein 22.6e-1142.39Show/hide
Query:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLISTATCSVGLAE
        MDN  LL  V+A+GG+    P  P + FNKD  L AV++ +NG KILAN DG++ L+AFE  S++AS+ S      T  + S+ + ++G  E
Subjt:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLISTATCSVGLAE

Arabidopsis top hitse value%identityAlignment
AT1G15750.1 Transducin family protein / WD-40 repeat family protein4.0e-1547.96Show/hide
Query:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLISTATC----SVGLAERA
        MD VQLL  +D DGG+     ASP I FNK+ +L AVS NEN IKI+AN DG++LL  FEN+S ++S       KP +N I+ A      S G A+R+
Subjt:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLISTATC----SVGLAERA

AT1G15750.2 Transducin family protein / WD-40 repeat family protein4.0e-1547.96Show/hide
Query:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLISTATC----SVGLAERA
        MD VQLL  +D DGG+     ASP I FNK+ +L AVS NEN IKI+AN DG++LL  FEN+S ++S       KP +N I+ A      S G A+R+
Subjt:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLISTATC----SVGLAERA

AT1G15750.3 Transducin family protein / WD-40 repeat family protein4.0e-1547.96Show/hide
Query:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLISTATC----SVGLAERA
        MD VQLL  +D DGG+     ASP I FNK+ +L AVS NEN IKI+AN DG++LL  FEN+S ++S       KP +N I+ A      S G A+R+
Subjt:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLISTATC----SVGLAERA

AT1G15750.4 Transducin family protein / WD-40 repeat family protein4.0e-1547.96Show/hide
Query:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLISTATC----SVGLAERA
        MD VQLL  +D DGG+     ASP I FNK+ +L AVS NEN IKI+AN DG++LL  FEN+S ++S       KP +N I+ A      S G A+R+
Subjt:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLISTATC----SVGLAERA

AT1G80490.1 TOPLESS-related 14.4e-1449.38Show/hide
Query:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLI
        MD +QLL  +DADGG+     ASP I FNK+ +L AVS+N+N IK++AN DG++LL   ENLS ++S       KP +N I
Subjt:  MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAATGTTCAACTTTTGATGACCGTAGATGCTGATGGAGGCGTTTGTGCAAGTTTCCCGGCAAGTCCGCACATCTGCTTTAACAAGGATTGGGCCCTTTTTGCTGT
TTCTAGCAATGAGAATGGAATTAAAATCTTAGCAAATGTGGATGGAATCCAACTATTGCAAGCATTTGAAAATCTTTCTTATGATGCATCTAGAACGTCAGAGGCCGGGA
TAAAGCCCACAGTAAATCTAATTTCAACTGCTACTTGTAGTGTAGGCCTTGCTGAGAGAGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGACAATGTTCAACTTTTGATGACCGTAGATGCTGATGGAGGCGTTTGTGCAAGTTTCCCGGCAAGTCCGCACATCTGCTTTAACAAGGATTGGGCCCTTTTTGCTGT
TTCTAGCAATGAGAATGGAATTAAAATCTTAGCAAATGTGGATGGAATCCAACTATTGCAAGCATTTGAAAATCTTTCTTATGATGCATCTAGAACGTCAGAGGCCGGGA
TAAAGCCCACAGTAAATCTAATTTCAACTGCTACTTGTAGTGTAGGCCTTGCTGAGAGAGCATAG
Protein sequenceShow/hide protein sequence
MDNVQLLMTVDADGGVCASFPASPHICFNKDWALFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNLISTATCSVGLAERA