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Lag0030654 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0030654
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr11:148625..149987
RNA-Seq ExpressionLag0030654
SyntenyLag0030654
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]4.4e-2539.66Show/hide
Query:  MKAEVPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGLSAAIRCRAFFFTLTGSARHWFERLKRRSIS----------------------------FKQ
        MK +VP KFK+P  K YDG  DP+ HL+ Y  W D +G++ AIRCR F FTLTGS R WF++LKR+SIS                             KQ
Subjt:  MKAEVPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGLSAAIRCRAFFFTLTGSARHWFERLKRRSIS----------------------------FKQ

Query:  QPGESLHDYITRFNDESLQVEGYSEGAALVAITVGLVRRKLLNSIGKSLPRTYAE--------FAPGHKIHERR
        +  ESL DY+ RFN E LQVEG ++   L+    G+   +L+ S GK    T++E         + G  IH +R
Subjt:  QPGESLHDYITRFNDESLQVEGYSEGAALVAITVGLVRRKLLNSIGKSLPRTYAE--------FAPGHKIHERR

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]3.1e-2643.67Show/hide
Query:  EEVMKAEVPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGLSAAIRCRAFFFTLTGSARHWFERLKRRSIS----------------------------
        EE+MK +VP KFK+PT K +DG  D V HL+AY+ WMD +G+S A++CR F  TL+GSAR WF +LKR SIS                            
Subjt:  EEVMKAEVPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGLSAAIRCRAFFFTLTGSARHWFERLKRRSIS----------------------------

Query:  FKQQPGESLHDYITRFNDESLQVEGYSEGAALVAITVGLVRRKLLNSIGKSLPRTYAE
         KQ+  ESLHDY+ RFN+E LQVEG +   +L+A    +    L  S GK  P T++E
Subjt:  FKQQPGESLHDYITRFNDESLQVEGYSEGAALVAITVGLVRRKLLNSIGKSLPRTYAE

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]1.3e-2441.94Show/hide
Query:  MKAEVPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGLSAAIRCRAFFFTLTGSARHWFERLKRRSIS----------------------------FKQ
        MK +   KFK+P    YDG  DP+ HL+AY+ W D + +  AIRCR F FTLTGSAR+WF +LKR SIS                             KQ
Subjt:  MKAEVPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGLSAAIRCRAFFFTLTGSARHWFERLKRRSIS----------------------------FKQ

Query:  QPGESLHDYITRFNDESLQVEGYSEGAALVAITVGLVRRKLLNSIGKSLPRTYAE
        +  ESL +Y+ RFN+E LQVEG ++  AL+A   G+   +L+ S GK  P T+ E
Subjt:  QPGESLHDYITRFNDESLQVEGYSEGAALVAITVGLVRRKLLNSIGKSLPRTYAE

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]2.0e-3041.75Show/hide
Query:  PKLKPGLPRPRETCKSEGFKRARHGRTNDQVDPPFTEEVMKAEVPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGLSAAIRCRAFFFTLTGSARHWFE
        P  +P     R + K +GF         DQ D PFTEE+M+ +VP KFK+PT K +D   DPV HL+AY+ WMD +G+S A+RCR F  TL GSAR WF 
Subjt:  PKLKPGLPRPRETCKSEGFKRARHGRTNDQVDPPFTEEVMKAEVPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGLSAAIRCRAFFFTLTGSARHWFE

Query:  RLKRRSIS----------------------------FKQQPGESLHDYITRFNDESLQVEGYSEGAALVAITVGLVRRKLLNSIGKSLPRTYAE
        +LKR SIS                             KQ+  ESL DY+ RFN+E LQVEG ++  +L+A   G+    L  S GK  P T++E
Subjt:  RLKRRSIS----------------------------FKQQPGESLHDYITRFNDESLQVEGYSEGAALVAITVGLVRRKLLNSIGKSLPRTYAE

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]1.0e-2944.85Show/hide
Query:  QVDPPFTEEVMKAEVPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGLSAAIRCRAFFFTLTGSARHWFERLKRRSIS---------------------
        Q D PFTEE+M+ +VP KFK+PT K +DG  +PV HL+AY+ WMD +G+S AIRCR F  TL GSAR WF +LKR SIS                     
Subjt:  QVDPPFTEEVMKAEVPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGLSAAIRCRAFFFTLTGSARHWFERLKRRSIS---------------------

Query:  -------FKQQPGESLHDYITRFNDESLQVEGYSEGAALVAITVGLVRRKLLNSIGKSLPRTYAE
                KQ+  ESLHDY+ RFN+E LQ+EG ++  +L+A   G+    L  S  K  P T++E
Subjt:  -------FKQQPGESLHDYITRFNDESLQVEGYSEGAALVAITVGLVRRKLLNSIGKSLPRTYAE

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166192.1e-2539.66Show/hide
Query:  MKAEVPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGLSAAIRCRAFFFTLTGSARHWFERLKRRSIS----------------------------FKQ
        MK +VP KFK+P  K YDG  DP+ HL+ Y  W D +G++ AIRCR F FTLTGS R WF++LKR+SIS                             KQ
Subjt:  MKAEVPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGLSAAIRCRAFFFTLTGSARHWFERLKRRSIS----------------------------FKQ

Query:  QPGESLHDYITRFNDESLQVEGYSEGAALVAITVGLVRRKLLNSIGKSLPRTYAE--------FAPGHKIHERR
        +  ESL DY+ RFN E LQVEG ++   L+    G+   +L+ S GK    T++E         + G  IH +R
Subjt:  QPGESLHDYITRFNDESLQVEGYSEGAALVAITVGLVRRKLLNSIGKSLPRTYAE--------FAPGHKIHERR

A0A6J1D7D2 uncharacterized protein LOC1110183071.5e-2643.67Show/hide
Query:  EEVMKAEVPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGLSAAIRCRAFFFTLTGSARHWFERLKRRSIS----------------------------
        EE+MK +VP KFK+PT K +DG  D V HL+AY+ WMD +G+S A++CR F  TL+GSAR WF +LKR SIS                            
Subjt:  EEVMKAEVPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGLSAAIRCRAFFFTLTGSARHWFERLKRRSIS----------------------------

Query:  FKQQPGESLHDYITRFNDESLQVEGYSEGAALVAITVGLVRRKLLNSIGKSLPRTYAE
         KQ+  ESLHDY+ RFN+E LQVEG +   +L+A    +    L  S GK  P T++E
Subjt:  FKQQPGESLHDYITRFNDESLQVEGYSEGAALVAITVGLVRRKLLNSIGKSLPRTYAE

A0A6J1DWY0 uncharacterized protein LOC1110252939.9e-3141.75Show/hide
Query:  PKLKPGLPRPRETCKSEGFKRARHGRTNDQVDPPFTEEVMKAEVPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGLSAAIRCRAFFFTLTGSARHWFE
        P  +P     R + K +GF         DQ D PFTEE+M+ +VP KFK+PT K +D   DPV HL+AY+ WMD +G+S A+RCR F  TL GSAR WF 
Subjt:  PKLKPGLPRPRETCKSEGFKRARHGRTNDQVDPPFTEEVMKAEVPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGLSAAIRCRAFFFTLTGSARHWFE

Query:  RLKRRSIS----------------------------FKQQPGESLHDYITRFNDESLQVEGYSEGAALVAITVGLVRRKLLNSIGKSLPRTYAE
        +LKR SIS                             KQ+  ESL DY+ RFN+E LQVEG ++  +L+A   G+    L  S GK  P T++E
Subjt:  RLKRRSIS----------------------------FKQQPGESLHDYITRFNDESLQVEGYSEGAALVAITVGLVRRKLLNSIGKSLPRTYAE

A0A6J1DZ49 uncharacterized protein LOC1110248516.2e-2541.94Show/hide
Query:  MKAEVPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGLSAAIRCRAFFFTLTGSARHWFERLKRRSIS----------------------------FKQ
        MK +   KFK+P    YDG  DP+ HL+AY+ W D + +  AIRCR F FTLTGSAR+WF +LKR SIS                             KQ
Subjt:  MKAEVPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGLSAAIRCRAFFFTLTGSARHWFERLKRRSIS----------------------------FKQ

Query:  QPGESLHDYITRFNDESLQVEGYSEGAALVAITVGLVRRKLLNSIGKSLPRTYAE
        +  ESL +Y+ RFN+E LQVEG ++  AL+A   G+   +L+ S GK  P T+ E
Subjt:  QPGESLHDYITRFNDESLQVEGYSEGAALVAITVGLVRRKLLNSIGKSLPRTYAE

A0A6J1E1E7 uncharacterized protein LOC1110255484.9e-3044.85Show/hide
Query:  QVDPPFTEEVMKAEVPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGLSAAIRCRAFFFTLTGSARHWFERLKRRSIS---------------------
        Q D PFTEE+M+ +VP KFK+PT K +DG  +PV HL+AY+ WMD +G+S AIRCR F  TL GSAR WF +LKR SIS                     
Subjt:  QVDPPFTEEVMKAEVPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGLSAAIRCRAFFFTLTGSARHWFERLKRRSIS---------------------

Query:  -------FKQQPGESLHDYITRFNDESLQVEGYSEGAALVAITVGLVRRKLLNSIGKSLPRTYAE
                KQ+  ESLHDY+ RFN+E LQ+EG ++  +L+A   G+    L  S  K  P T++E
Subjt:  -------FKQQPGESLHDYITRFNDESLQVEGYSEGAALVAITVGLVRRKLLNSIGKSLPRTYAE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAAGGGGATGGAGAAGAGAAATCAAGACGTAAACACAGAGAATTCGGATGGTGACCCCACCAGCGGAGGTCACGGGAAGAAGGCCGAGATCGGCCTCGGACTGAA
TCTCCTCGTCATCGGTCTCCATTGCCCTCATACCGACAGAAGCAAGCTGATCTCAAAATTGCTACTCTCGAAAACAAAACCTAGGAGTCTGATCGAGGAGAAGCGCATAA
GTGCAAAACTACCGAATCTGAGGCCAGAGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGGAGACCTGCAAAAGTGAAGGATTCAAGAGAGCAAGACATGGAAGA
ACTAATGACCAAGTCGACCCACCATTCACAGAAGAAGTCATGAAAGCTGAGGTGCCCCAGAAGTTCAAGGTGCCTACATTCAAGCTGTATGATGGCAAGAAAGACCCTGT
CCAGCATCTAAATGCCTACAAAAGCTGGATGGACTTCCACGGCCTCTCAGCTGCAATCAGGTGTCGTGCATTCTTTTTCACTCTAACAGGATCAGCCAGGCATTGGTTTG
AAAGGCTGAAAAGGAGATCCATCAGCTTCAAACAACAGCCTGGTGAGAGCTTGCATGATTACATAACGCGTTTTAACGACGAATCACTGCAGGTTGAGGGATACAGTGAG
GGAGCAGCCCTAGTAGCCATCACAGTCGGACTGGTAAGACGAAAACTGCTCAATTCAATAGGTAAGAGCCTACCTCGAACCTATGCAGAGTTCGCTCCCGGACACAAAAT
ACATGAGCGTAGAGGAGTTGCTCAAGTCAAAGAAGTCGGACGAGAACACAAAAAACATTTTCATCTGACCACGACAGTAAAAAGGACAAGAGGTAGCGAACAGACGAAAG
AGGTCGAGACCGACCAGACCAAGGAGACTACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTAAGGGGATGGAGAAGAGAAATCAAGACGTAAACACAGAGAATTCGGATGGTGACCCCACCAGCGGAGGTCACGGGAAGAAGGCCGAGATCGGCCTCGGACTGAA
TCTCCTCGTCATCGGTCTCCATTGCCCTCATACCGACAGAAGCAAGCTGATCTCAAAATTGCTACTCTCGAAAACAAAACCTAGGAGTCTGATCGAGGAGAAGCGCATAA
GTGCAAAACTACCGAATCTGAGGCCAGAGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGGAGACCTGCAAAAGTGAAGGATTCAAGAGAGCAAGACATGGAAGA
ACTAATGACCAAGTCGACCCACCATTCACAGAAGAAGTCATGAAAGCTGAGGTGCCCCAGAAGTTCAAGGTGCCTACATTCAAGCTGTATGATGGCAAGAAAGACCCTGT
CCAGCATCTAAATGCCTACAAAAGCTGGATGGACTTCCACGGCCTCTCAGCTGCAATCAGGTGTCGTGCATTCTTTTTCACTCTAACAGGATCAGCCAGGCATTGGTTTG
AAAGGCTGAAAAGGAGATCCATCAGCTTCAAACAACAGCCTGGTGAGAGCTTGCATGATTACATAACGCGTTTTAACGACGAATCACTGCAGGTTGAGGGATACAGTGAG
GGAGCAGCCCTAGTAGCCATCACAGTCGGACTGGTAAGACGAAAACTGCTCAATTCAATAGGTAAGAGCCTACCTCGAACCTATGCAGAGTTCGCTCCCGGACACAAAAT
ACATGAGCGTAGAGGAGTTGCTCAAGTCAAAGAAGTCGGACGAGAACACAAAAAACATTTTCATCTGACCACGACAGTAAAAAGGACAAGAGGTAGCGAACAGACGAAAG
AGGTCGAGACCGACCAGACCAAGGAGACTACTTGA
Protein sequenceShow/hide protein sequence
MSKGMEKRNQDVNTENSDGDPTSGGHGKKAEIGLGLNLLVIGLHCPHTDRSKLISKLLLSKTKPRSLIEEKRISAKLPNLRPELPKLKPGLPRPRETCKSEGFKRARHGR
TNDQVDPPFTEEVMKAEVPQKFKVPTFKLYDGKKDPVQHLNAYKSWMDFHGLSAAIRCRAFFFTLTGSARHWFERLKRRSISFKQQPGESLHDYITRFNDESLQVEGYSE
GAALVAITVGLVRRKLLNSIGKSLPRTYAEFAPGHKIHERRGVAQVKEVGREHKKHFHLTTTVKRTRGSEQTKEVETDQTKETT