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Lag0030671 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0030671
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionmetalloendoproteinase 2-MMP
Genome locationchr11:306674..307199
RNA-Seq ExpressionLag0030671
SyntenyLag0030671
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0030198 - extracellular matrix organization (biological process)
GO:0030574 - collagen catabolic process (biological process)
GO:0031012 - extracellular matrix (cellular component)
GO:0031225 - anchored component of membrane (cellular component)
GO:0004222 - metalloendopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR002477 - Peptidoglycan binding-like
IPR036365 - PGBD-like superfamily
IPR036366 - PGBD superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029995.1 Metalloendoproteinase 2-MMP, partial [Cucurbita argyrosperma subsp. argyrosperma]5.6e-2173.91Show/hide
Query:  QGCRPGDRLNGLANLKTYLKKFDYIPHSPSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQIQL
        +GCRPGD L GL+NLKTYL KF YIP+SPSNF+DLFD++L SAL TYQKNFNLN +G+LD +TL+QIQL
Subjt:  QGCRPGDRLNGLANLKTYLKKFDYIPHSPSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQIQL

XP_022946065.1 metalloendoproteinase 5-MMP-like [Cucurbita moschata]1.1e-2175.36Show/hide
Query:  QGCRPGDRLNGLANLKTYLKKFDYIPHSPSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQIQL
        +GCRPGD LNGL+NLKTYL KF YIP+SPSNF+DLFD++L SAL TYQKNFNLN +G+LD +TL+QIQL
Subjt:  QGCRPGDRLNGLANLKTYLKKFDYIPHSPSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQIQL

XP_022999578.1 metalloendoproteinase 2-MMP [Cucurbita maxima]6.1e-2072.46Show/hide
Query:  QGCRPGDRLNGLANLKTYLKKFDYIPHSPSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQIQL
        +GCR GD L GL+NLKTYL KF YIP+SPSNF+DLFD++L SAL TYQKNFNLN +G+LD +TL+QIQL
Subjt:  QGCRPGDRLNGLANLKTYLKKFDYIPHSPSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQIQL

XP_023546725.1 metalloendoproteinase 2-MMP-like [Cucurbita pepo subsp. pepo]5.6e-2173.91Show/hide
Query:  QGCRPGDRLNGLANLKTYLKKFDYIPHSPSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQIQL
        +GCRPGD L GL+NLKTYL KF YIP+SPSNF+DLFD++L SAL TYQKNFNLN +G+LD +TL+QIQL
Subjt:  QGCRPGDRLNGLANLKTYLKKFDYIPHSPSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQIQL

XP_038889498.1 metalloendoproteinase 2-MMP [Benincasa hispida]7.3e-2179.71Show/hide
Query:  QGCRPGDRLNGLANLKTYLKKFDYIPHSPSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQIQL
        +GCRPGDRLNGL+NLKTYLK+F YIP SP NFTDLFD LL SALQTYQ NFNLNV+G LD +TL+QIQL
Subjt:  QGCRPGDRLNGLANLKTYLKKFDYIPHSPSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQIQL

TrEMBL top hitse value%identityAlignment
A0A0A0KRY9 ZnMc domain-containing protein1.9e-1973.91Show/hide
Query:  QGCRPGDRLNGLANLKTYLKKFDYIPHSPSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQIQL
        +GCRPGDR NGL+NLKTYL +F YIP SP NFTDLFD LL SAL+TYQ NFNLN +G LD +TL+QIQL
Subjt:  QGCRPGDRLNGLANLKTYLKKFDYIPHSPSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQIQL

A0A1S3CPI6 metalloendoproteinase 2-MMP1.9e-1975.36Show/hide
Query:  QGCRPGDRLNGLANLKTYLKKFDYIPHSPSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQIQL
        +GCRPGDRLNGL+NLKTYL  F YIP SP NFTDLFD LL SAL+TYQ NFNLN +G LD +TL+QIQL
Subjt:  QGCRPGDRLNGLANLKTYLKKFDYIPHSPSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQIQL

A0A5D3DJB2 Metalloendoproteinase 2-MMP1.9e-1975.36Show/hide
Query:  QGCRPGDRLNGLANLKTYLKKFDYIPHSPSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQIQL
        +GCRPGDRLNGL+NLKTYL  F YIP SP NFTDLFD LL SAL+TYQ NFNLN +G LD +TL+QIQL
Subjt:  QGCRPGDRLNGLANLKTYLKKFDYIPHSPSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQIQL

A0A6J1G2R8 metalloendoproteinase 5-MMP-like5.4e-2275.36Show/hide
Query:  QGCRPGDRLNGLANLKTYLKKFDYIPHSPSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQIQL
        +GCRPGD LNGL+NLKTYL KF YIP+SPSNF+DLFD++L SAL TYQKNFNLN +G+LD +TL+QIQL
Subjt:  QGCRPGDRLNGLANLKTYLKKFDYIPHSPSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQIQL

A0A6J1KK37 metalloendoproteinase 2-MMP3.0e-2072.46Show/hide
Query:  QGCRPGDRLNGLANLKTYLKKFDYIPHSPSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQIQL
        +GCR GD L GL+NLKTYL KF YIP+SPSNF+DLFD++L SAL TYQKNFNLN +G+LD +TL+QIQL
Subjt:  QGCRPGDRLNGLANLKTYLKKFDYIPHSPSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQIQL

SwissProt top hitse value%identityAlignment
O04529 Metalloendoproteinase 2-MMP1.1e-1150.75Show/hide
Query:  GCRPGDRLNGLANLKTYLKKFDYIPHSPS-NFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQI
        GC  G  ++GL  +K Y ++F YIP + S NFTD FDD+L +A++ YQ NFNLNV+G LD  T+  I
Subjt:  GCRPGDRLNGLANLKTYLKKFDYIPHSPS-NFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQI

O23507 Metalloendoproteinase 1-MMP4.0e-0637.5Show/hide
Query:  GDRLNGLANLKTYLKKFDYIPHSPSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQIQL
        G  ++G++ LK YL +F Y+      F+D+FD  L SA+  YQ+N  L ++G LD  T++ + L
Subjt:  GDRLNGLANLKTYLKKFDYIPHSPSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQIQL

P29136 Metalloendoproteinase 12.9e-1253.97Show/hide
Query:  PGDRLNGLANLKTYLKKFDYIPHSPSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQI
        PG    GL+N+K Y     YIP++P +F D FDD L+SA++TYQKN+NLNV+G  D  TL QI
Subjt:  PGDRLNGLANLKTYLKKFDYIPHSPSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQI

Q5XF51 Metalloendoproteinase 3-MMP4.6e-1047.06Show/hide
Query:  GCRPGDRLNGLANLKTYLKKFDYIPHS--PSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQI
        GC  G + +GL  LK Y + F YI  +    NFTD FDD+L +A++ YQ+NF LNV+G LD  TL  +
Subjt:  GCRPGDRLNGLANLKTYLKKFDYIPHS--PSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQI

Q9ZUJ5 Metalloendoproteinase 5-MMP5.8e-1356.06Show/hide
Query:  GCRPGDRLNGLANLKTYLKKFDYIPHSPSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQI
        GC  G+ +NGL+ LK Y ++F YI  +  N TD FDD+L SA+ TYQKNFNL V+G LD  TL QI
Subjt:  GCRPGDRLNGLANLKTYLKKFDYIPHSPSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQI

Arabidopsis top hitse value%identityAlignment
AT1G24140.1 Matrixin family protein3.3e-1147.06Show/hide
Query:  GCRPGDRLNGLANLKTYLKKFDYIPHS--PSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQI
        GC  G + +GL  LK Y + F YI  +    NFTD FDD+L +A++ YQ+NF LNV+G LD  TL  +
Subjt:  GCRPGDRLNGLANLKTYLKKFDYIPHS--PSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQI

AT1G59970.1 Matrixin family protein4.1e-1456.06Show/hide
Query:  GCRPGDRLNGLANLKTYLKKFDYIPHSPSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQI
        GC  G+ +NGL+ LK Y ++F YI  +  N TD FDD+L SA+ TYQKNFNL V+G LD  TL QI
Subjt:  GCRPGDRLNGLANLKTYLKKFDYIPHSPSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQI

AT1G70170.1 matrix metalloproteinase7.8e-1350.75Show/hide
Query:  GCRPGDRLNGLANLKTYLKKFDYIPHSPS-NFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQI
        GC  G  ++GL  +K Y ++F YIP + S NFTD FDD+L +A++ YQ NFNLNV+G LD  T+  I
Subjt:  GCRPGDRLNGLANLKTYLKKFDYIPHSPS-NFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQI

AT4G16640.1 Matrixin family protein2.9e-0737.5Show/hide
Query:  GDRLNGLANLKTYLKKFDYIPHSPSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQIQL
        G  ++G++ LK YL +F Y+      F+D+FD  L SA+  YQ+N  L ++G LD  T++ + L
Subjt:  GDRLNGLANLKTYLKKFDYIPHSPSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQIQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCCCAGTGCGCCGACGACAGTGAAGGTGTTGCCTTCGATGCCTTCATTGGCGCTCGGATACTACATCTTACTGGCTAAACAAAACCAAGTGCGCTTGGGACGAAT
TCCAGAAGCTCAAGGTTGCCGCCCTGGTGACCGCCTCAACGGCTTGGCCAACCTCAAAACTTATTTGAAAAAATTCGACTACATTCCCCATTCCCCCTCCAATTTCACCG
ATCTTTTCGACGACCTCCTTCTTTCCGCCCTCCAAACCTACCAAAAGAATTTCAATCTCAACGTATCAGGCTACCTCGACTACAAGACTCTCTCCCAGATTCAGCTCGAT
GCAGCATCGCCGACATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCCCAGTGCGCCGACGACAGTGAAGGTGTTGCCTTCGATGCCTTCATTGGCGCTCGGATACTACATCTTACTGGCTAAACAAAACCAAGTGCGCTTGGGACGAAT
TCCAGAAGCTCAAGGTTGCCGCCCTGGTGACCGCCTCAACGGCTTGGCCAACCTCAAAACTTATTTGAAAAAATTCGACTACATTCCCCATTCCCCCTCCAATTTCACCG
ATCTTTTCGACGACCTCCTTCTTTCCGCCCTCCAAACCTACCAAAAGAATTTCAATCTCAACGTATCAGGCTACCTCGACTACAAGACTCTCTCCCAGATTCAGCTCGAT
GCAGCATCGCCGACATAA
Protein sequenceShow/hide protein sequence
MKPSAPTTVKVLPSMPSLALGYYILLAKQNQVRLGRIPEAQGCRPGDRLNGLANLKTYLKKFDYIPHSPSNFTDLFDDLLLSALQTYQKNFNLNVSGYLDYKTLSQIQLD
AASPT