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Lag0030673 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0030673
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr11:317449..318825
RNA-Seq ExpressionLag0030673
SyntenyLag0030673
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVX23845.1 putative ribonuclease H protein [Vitis vinifera]6.7e-2142.11Show/hide
Query:  ATQKGADFWSSVEEKLAAKFSKWKNN-IGSRGRVTLANAVSSSMPIYLLSVFRCPSKVIKRLEKLIKDLIW-KGPPERGFNLVNWNNTPMPFQNGGLGVG
        A  K    W  VEE+   + + WK N I   GR+TL  +  SSMPIYL+S+ R P  V  RLEK+ +D +W +G  ER  +LVNW++     + GGLGV 
Subjt:  ATQKGADFWSSVEEKLAAKFSKWKNN-IGSRGRVTLANAVSSSMPIYLLSVFRCPSKVIKRLEKLIKDLIW-KGPPERGFNLVNWNNTPMPFQNGGLGVG

Query:  NLTVRNISLLARWGWSFLNEQNALWRRITASTY
         L+  N +LL +W W F NE+ ALWR++ +  +
Subjt:  NLTVRNISLLARWGWSFLNEQNALWRRITASTY

TYJ99315.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.9e-2143.65Show/hide
Query:  FWSSVEEKLAAKFSKWK-NNIGSRGRVTLANAVSSSMPIYLLSVFRCPSKVIKRLEKLIKDLIWKG-PPERGFNLVNWNNTPMPFQNGGLGVGNLTVRNI
        FW +VE+K+  K + WK   I   GR+TL  +  SS+PIY LSVF+ PS   K +EKL +  +WKG     G +L+NW       + GGLG+  L V N 
Subjt:  FWSSVEEKLAAKFSKWK-NNIGSRGRVTLANAVSSSMPIYLLSVFRCPSKVIKRLEKLIKDLIWKG-PPERGFNLVNWNNTPMPFQNGGLGVGNLTVRNI

Query:  SLLARWGWSFLNEQNALWRRITASTY
        +LL++W W +L+E NALWRR+    Y
Subjt:  SLLARWGWSFLNEQNALWRRITASTY

TYK00493.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.1e-2142.06Show/hide
Query:  FWSSVEEKLAAKFSKWK-NNIGSRGRVTLANAVSSSMPIYLLSVFRCPSKVIKRLEKLIKDLIWKGP-PERGFNLVNWNNTPMPFQNGGLGVGNLTVRNI
        FW ++E+++  K S WK  +I   GR+TL  +  SS+PIY LSVF+ PS   K +EKL ++ +WKG    +G +L+NW+    P + GGLG+  L V N 
Subjt:  FWSSVEEKLAAKFSKWK-NNIGSRGRVTLANAVSSSMPIYLLSVFRCPSKVIKRLEKLIKDLIWKGP-PERGFNLVNWNNTPMPFQNGGLGVGNLTVRNI

Query:  SLLARWGWSFLNEQNALWRRITASTY
        +LL++W W + +E N+LWRR+    Y
Subjt:  SLLARWGWSFLNEQNALWRRITASTY

TYK15315.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]8.7e-2142.06Show/hide
Query:  FWSSVEEKLAAKFSKWKN-NIGSRGRVTLANAVSSSMPIYLLSVFRCPSKVIKRLEKLIKDLIWKGP-PERGFNLVNWNNTPMPFQNGGLGVGNLTVRNI
        FW +VE+K+  K + WK   I   GR+TL  +  SS+PIY LSVF+ PS + K +EK  ++ +WKG    +G +L+NW       + GGLG+  L V N 
Subjt:  FWSSVEEKLAAKFSKWKN-NIGSRGRVTLANAVSSSMPIYLLSVFRCPSKVIKRLEKLIKDLIWKGP-PERGFNLVNWNNTPMPFQNGGLGVGNLTVRNI

Query:  SLLARWGWSFLNEQNALWRRITASTY
         LL++W W + +E NALWRR+    Y
Subjt:  SLLARWGWSFLNEQNALWRRITASTY

XP_022151711.1 uncharacterized protein LOC111019624 [Momordica charantia]6.0e-2238.67Show/hide
Query:  ISSLEVNEAEEPFFMEATQKG-ADFWSSVEEKLAAKFSKWKNNIGSR-GRVTLANAVSSSMPIYLLSVFRCPSKVIKRLEKLIKDLIWKGPPE-RGFNLV
        IS L++N  +        + G    W+++ +K     S WK    S+ GR+TL  +V   +P Y LS+FR P KVI+ LEK+++D +W+G  E  G +LV
Subjt:  ISSLEVNEAEEPFFMEATQKG-ADFWSSVEEKLAAKFSKWKNNIGSR-GRVTLANAVSSSMPIYLLSVFRCPSKVIKRLEKLIKDLIWKGPPE-RGFNLV

Query:  NWNNTPMPFQNGGLGVGNLTVRNISLLARWGWSFLNEQNALWRRITASTYSLMKRNLVPKARLGPKSSTHLKNPGKATARC
        NW     P + GGLGVGNL +RN + LA+W W F +E +ALWR+I  S Y     + +    L   S     NP KA A C
Subjt:  NWNNTPMPFQNGGLGVGNLTVRNISLLARWGWSFLNEQNALWRRITASTYSLMKRNLVPKARLGPKSSTHLKNPGKATARC

TrEMBL top hitse value%identityAlignment
A0A438KRM3 Putative ribonuclease H protein3.2e-2142.11Show/hide
Query:  ATQKGADFWSSVEEKLAAKFSKWKNN-IGSRGRVTLANAVSSSMPIYLLSVFRCPSKVIKRLEKLIKDLIW-KGPPERGFNLVNWNNTPMPFQNGGLGVG
        A  K    W  VEE+   + + WK N I   GR+TL  +  SSMPIYL+S+ R P  V  RLEK+ +D +W +G  ER  +LVNW++     + GGLGV 
Subjt:  ATQKGADFWSSVEEKLAAKFSKWKNN-IGSRGRVTLANAVSSSMPIYLLSVFRCPSKVIKRLEKLIKDLIW-KGPPERGFNLVNWNNTPMPFQNGGLGVG

Query:  NLTVRNISLLARWGWSFLNEQNALWRRITASTY
         L+  N +LL +W W F NE+ ALWR++ +  +
Subjt:  NLTVRNISLLARWGWSFLNEQNALWRRITASTY

A0A5D3BL61 LINE-1 retrotransposable element ORF2 protein2.5e-2142.06Show/hide
Query:  FWSSVEEKLAAKFSKWK-NNIGSRGRVTLANAVSSSMPIYLLSVFRCPSKVIKRLEKLIKDLIWKGP-PERGFNLVNWNNTPMPFQNGGLGVGNLTVRNI
        FW ++E+++  K S WK  +I   GR+TL  +  SS+PIY LSVF+ PS   K +EKL ++ +WKG    +G +L+NW+    P + GGLG+  L V N 
Subjt:  FWSSVEEKLAAKFSKWK-NNIGSRGRVTLANAVSSSMPIYLLSVFRCPSKVIKRLEKLIKDLIWKGP-PERGFNLVNWNNTPMPFQNGGLGVGNLTVRNI

Query:  SLLARWGWSFLNEQNALWRRITASTY
        +LL++W W + +E N+LWRR+    Y
Subjt:  SLLARWGWSFLNEQNALWRRITASTY

A0A5D3BLV7 LINE-1 retrotransposable element ORF2 protein1.9e-2143.65Show/hide
Query:  FWSSVEEKLAAKFSKWK-NNIGSRGRVTLANAVSSSMPIYLLSVFRCPSKVIKRLEKLIKDLIWKG-PPERGFNLVNWNNTPMPFQNGGLGVGNLTVRNI
        FW +VE+K+  K + WK   I   GR+TL  +  SS+PIY LSVF+ PS   K +EKL +  +WKG     G +L+NW       + GGLG+  L V N 
Subjt:  FWSSVEEKLAAKFSKWK-NNIGSRGRVTLANAVSSSMPIYLLSVFRCPSKVIKRLEKLIKDLIWKG-PPERGFNLVNWNNTPMPFQNGGLGVGNLTVRNI

Query:  SLLARWGWSFLNEQNALWRRITASTY
        +LL++W W +L+E NALWRR+    Y
Subjt:  SLLARWGWSFLNEQNALWRRITASTY

A0A6J1DFI2 uncharacterized protein LOC1110196242.9e-2238.67Show/hide
Query:  ISSLEVNEAEEPFFMEATQKG-ADFWSSVEEKLAAKFSKWKNNIGSR-GRVTLANAVSSSMPIYLLSVFRCPSKVIKRLEKLIKDLIWKGPPE-RGFNLV
        IS L++N  +        + G    W+++ +K     S WK    S+ GR+TL  +V   +P Y LS+FR P KVI+ LEK+++D +W+G  E  G +LV
Subjt:  ISSLEVNEAEEPFFMEATQKG-ADFWSSVEEKLAAKFSKWKNNIGSR-GRVTLANAVSSSMPIYLLSVFRCPSKVIKRLEKLIKDLIWKGPPE-RGFNLV

Query:  NWNNTPMPFQNGGLGVGNLTVRNISLLARWGWSFLNEQNALWRRITASTYSLMKRNLVPKARLGPKSSTHLKNPGKATARC
        NW     P + GGLGVGNL +RN + LA+W W F +E +ALWR+I  S Y     + +    L   S     NP KA A C
Subjt:  NWNNTPMPFQNGGLGVGNLTVRNISLLARWGWSFLNEQNALWRRITASTYSLMKRNLVPKARLGPKSSTHLKNPGKATARC

A0A803P465 Uncharacterized protein3.2e-2142.36Show/hide
Query:  FWSSVEEKLAAKFSKWKNNIGSR-GRVTLANAVSSSMPIYLLSVFRCPSKVIKRLEKLIKDLIWKGPPER-GFNLVNWNNTPMPFQNGGLGVGNLTVRNI
        FW  V +K A +   WK    S+ GR+TL  +V SS+P+Y LS+F+ P  V K LEK+++D +W+G     G +LV W+    P   GGLG+G L +RN 
Subjt:  FWSSVEEKLAAKFSKWKNNIGSR-GRVTLANAVSSSMPIYLLSVFRCPSKVIKRLEKLIKDLIWKGPPER-GFNLVNWNNTPMPFQNGGLGVGNLTVRNI

Query:  SLLARWGWSFLNEQNALWRRITASTYSLMKRNLVPK--ARLGPK
        SLL +W W F  EQN+LW R+  S Y         K  +RL PK
Subjt:  SLLARWGWSFLNEQNALWRRITASTYSLMKRNLVPK--ARLGPK

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657501.7e-1432Show/hide
Query:  DFWSSVEEKLAAKFSKWK-NNIGSRGRVTLANAVSSSMPIYLLSVFRCPSKVIKRLEKLIKDLIWKGPPE-RGFNLVNWNNTPMPFQNGGLGVGNLTVRN
        D +  + E+++++ S W+   +   GR+TL  AV SSMP++ +S    P  ++ RL++L +  +W    E +  +LV W+    P + GGLGV      N
Subjt:  DFWSSVEEKLAAKFSKWK-NNIGSRGRVTLANAVSSSMPIYLLSVFRCPSKVIKRLEKLIKDLIWKGPPE-RGFNLVNWNNTPMPFQNGGLGVGNLTVRN

Query:  ISLLARWGWSFLNEQNALWRRITASTYSLMK----RNLVPKARLGPKSST
         +L+++ GW  L E+N+LW  +    Y + +    R L+PK   G  SST
Subjt:  ISLLARWGWSFLNEQNALWRRITASTYSLMK----RNLVPKARLGPKSST

Arabidopsis top hitse value%identityAlignment
AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.6e-0726.67Show/hide
Query:  EKLAAKFSKW-KNNIGSRGRVTLANAVSSSMPIYLLSVFRCPSKVIKRLEKLIKDLIWKGPPERGFNL-VNWNNTPMPFQNGGLGVGNL---------TV
        EK+  +  KW   ++   GR+ L ++V  S+  + +S FR PS  IK ++ +    +W GP        V W++   P   GGLG+ +L         ++
Subjt:  EKLAAKFSKW-KNNIGSRGRVTLANAVSSSMPIYLLSVFRCPSKVIKRLEKLIKDLIWKGPPERGFNL-VNWNNTPMPFQNGGLGVGNL---------TV

Query:  RNISLLARWGWSFLNEQNAL
           + L  W W  + +  AL
Subjt:  RNISLLARWGWSFLNEQNAL

AT4G29090.1 Ribonuclease H-like superfamily protein4.2e-0524.18Show/hide
Query:  SMPIYLLSVFRCPSKVIKRLEKLIKDLIWKGPPE-RGFNLVNWNNTPMPFQNGGLGVGNLTVRNISLLARWGWSFLNEQNALWRRITASTY
        ++P Y ++ F  P  V K++  ++ D  W+   E +G +   W++       GG+G  ++   N++LL +  W  L+   +L  ++  S Y
Subjt:  SMPIYLLSVFRCPSKVIKRLEKLIKDLIWKGPPE-RGFNLVNWNNTPMPFQNGGLGVGNLTVRNISLLARWGWSFLNEQNALWRRITASTY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCATGGAAAAGCCTCCAAAAACTTCTAGAAAAAAAAATCTCATATCCAGCCTCGAGGTAAACGAGGCAGAGGAGCCATTCTTTATGGAAGCAACCCAAAAGGGAGC
AGATTTTTGGAGCTCCGTTGAAGAAAAGTTGGCTGCCAAATTCTCCAAATGGAAGAACAACATCGGTTCTAGAGGAAGAGTCACTCTTGCAAATGCAGTTTCGTCCAGCA
TGCCCATTTATCTTTTATCAGTCTTTAGATGCCCTTCAAAAGTTATAAAAAGGCTGGAAAAGCTCATTAAAGACCTTATTTGGAAAGGCCCTCCAGAGAGAGGTTTTAAC
CTCGTCAATTGGAACAATACCCCGATGCCTTTTCAAAATGGAGGGCTGGGAGTAGGTAACCTTACTGTGAGGAATATCAGTTTACTTGCTAGGTGGGGTTGGAGCTTTTT
GAATGAACAAAATGCACTCTGGAGAAGAATTACTGCCAGCACATACTCTTTGATGAAGAGGAACCTAGTTCCAAAGGCCCGTCTTGGGCCTAAATCTTCAACCCATCTCA
AAAACCCTGGGAAAGCCACTGCCAGATGCTGCCTTCTTGTGGAAATATGGCACAGTTATTTTCAAGACTATGGAGTGGCTAATTCCAAAGGTTACTTTATAAATCAATAT
TGGGGAATCCACCTCTTGGGACATCTTGTTGAGAAGGAATCTCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCATGGAAAAGCCTCCAAAAACTTCTAGAAAAAAAAATCTCATATCCAGCCTCGAGGTAAACGAGGCAGAGGAGCCATTCTTTATGGAAGCAACCCAAAAGGGAGC
AGATTTTTGGAGCTCCGTTGAAGAAAAGTTGGCTGCCAAATTCTCCAAATGGAAGAACAACATCGGTTCTAGAGGAAGAGTCACTCTTGCAAATGCAGTTTCGTCCAGCA
TGCCCATTTATCTTTTATCAGTCTTTAGATGCCCTTCAAAAGTTATAAAAAGGCTGGAAAAGCTCATTAAAGACCTTATTTGGAAAGGCCCTCCAGAGAGAGGTTTTAAC
CTCGTCAATTGGAACAATACCCCGATGCCTTTTCAAAATGGAGGGCTGGGAGTAGGTAACCTTACTGTGAGGAATATCAGTTTACTTGCTAGGTGGGGTTGGAGCTTTTT
GAATGAACAAAATGCACTCTGGAGAAGAATTACTGCCAGCACATACTCTTTGATGAAGAGGAACCTAGTTCCAAAGGCCCGTCTTGGGCCTAAATCTTCAACCCATCTCA
AAAACCCTGGGAAAGCCACTGCCAGATGCTGCCTTCTTGTGGAAATATGGCACAGTTATTTTCAAGACTATGGAGTGGCTAATTCCAAAGGTTACTTTATAAATCAATAT
TGGGGAATCCACCTCTTGGGACATCTTGTTGAGAAGGAATCTCACTGA
Protein sequenceShow/hide protein sequence
MGMEKPPKTSRKKNLISSLEVNEAEEPFFMEATQKGADFWSSVEEKLAAKFSKWKNNIGSRGRVTLANAVSSSMPIYLLSVFRCPSKVIKRLEKLIKDLIWKGPPERGFN
LVNWNNTPMPFQNGGLGVGNLTVRNISLLARWGWSFLNEQNALWRRITASTYSLMKRNLVPKARLGPKSSTHLKNPGKATARCCLLVEIWHSYFQDYGVANSKGYFINQY
WGIHLLGHLVEKESH