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Lag0030688 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0030688
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description28S ribosomal protein S9
Genome locationchr11:415211..415810
RNA-Seq ExpressionLag0030688
SyntenyLag0030688
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005763 - mitochondrial small ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579377.1 30S ribosomal protein S9, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]3.4e-8285.57Show/hide
Query:  MLSRLLPKPSHFRLLALISTKAPAQTPTFRLLPRFLSTNNNGSNNNNNSGSRDQPTSNVWKLSQENDGKFDQLFTQEADNLDGIAEDDSAPSHDDSWVRS
        MLSRLLPKPSHFRLL LISTK PAQ+P F LLPRF S++NNGSNNN N GSRDQPTSNVWKLS+E+D  FDQLFTQEADNLDGIAEDDSAP++DDSWVRS
Subjt:  MLSRLLPKPSHFRLLALISTKAPAQTPTFRLLPRFLSTNNNGSNNNNNSGSRDQPTSNVWKLSQENDGKFDQLFTQEADNLDGIAEDDSAPSHDDSWVRS

Query:  KDGDQGAEGDIFASVEKEIRGNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIQEDAVEIGGSRDEIKEVDSKSSEDAKKLEKEEQELTAILKG
        +DGDQGA GDIFA VEKEIRGNKD DG NEWV A KFEPW LVEEEKSDVFNIQEDAVEIG  RDEIKEVDS+SSEDA+KLEKEEQELTAILKG
Subjt:  KDGDQGAEGDIFASVEKEIRGNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIQEDAVEIGGSRDEIKEVDSKSSEDAKKLEKEEQELTAILKG

XP_022972996.1 28S ribosomal protein S9, mitochondrial [Cucurbita maxima]1.5e-8285.57Show/hide
Query:  MLSRLLPKPSHFRLLALISTKAPAQTPTFRLLPRFLSTNNNGSNNNNNSGSRDQPTSNVWKLSQENDGKFDQLFTQEADNLDGIAEDDSAPSHDDSWVRS
        MLSRLLPKPSHFRLL LISTK PAQ P F +LPRF S++NNGSNNN N GSRDQPTSNVWKLS+E+D  FDQLFTQEADNLDGIAEDDSAP++DD+WVRS
Subjt:  MLSRLLPKPSHFRLLALISTKAPAQTPTFRLLPRFLSTNNNGSNNNNNSGSRDQPTSNVWKLSQENDGKFDQLFTQEADNLDGIAEDDSAPSHDDSWVRS

Query:  KDGDQGAEGDIFASVEKEIRGNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIQEDAVEIGGSRDEIKEVDSKSSEDAKKLEKEEQELTAILKG
        +DGDQGA GDIFA VEKEIRG+KDGDG NEWVTA K EPWSLVEEEKSDVFNIQEDAVEIG SRDEIKEVDS+SSEDA+KLEKEEQELTAILKG
Subjt:  KDGDQGAEGDIFASVEKEIRGNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIQEDAVEIGGSRDEIKEVDSKSSEDAKKLEKEEQELTAILKG

XP_038874636.1 30S ribosomal protein S9, mitochondrial isoform X1 [Benincasa hispida]1.5e-8286.08Show/hide
Query:  MLSRLLPKPSHFRLLALISTKAPAQTPTFRLLPRFLSTNNNGSNNNNNSGSRDQPTSNVWKLSQENDGKFDQLFTQEADNLDGIAEDDSAPSHDDSWVRS
        MLSRLLPKPSHFRLL LISTK PAQTP+F LL R  ST+NNGSNNN NSGSRDQPTSNVWK+SQENDG FDQLFTQEAD+LD IAEDDSAP +DDSWV S
Subjt:  MLSRLLPKPSHFRLLALISTKAPAQTPTFRLLPRFLSTNNNGSNNNNNSGSRDQPTSNVWKLSQENDGKFDQLFTQEADNLDGIAEDDSAPSHDDSWVRS

Query:  KDGDQGAEGDIFASVEKEIRGNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIQEDAVEIGGSRDEIKEVDSKSSEDAKKLEKEEQELTAILKG
        K  DQGAEGDIFAS+E+E+RGNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNI+E AVEIG S DE KEVDSKSSEDA+KLEKEEQELTAILKG
Subjt:  KDGDQGAEGDIFASVEKEIRGNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIQEDAVEIGGSRDEIKEVDSKSSEDAKKLEKEEQELTAILKG

XP_038874637.1 30S ribosomal protein S9, mitochondrial isoform X2 [Benincasa hispida]1.5e-8286.08Show/hide
Query:  MLSRLLPKPSHFRLLALISTKAPAQTPTFRLLPRFLSTNNNGSNNNNNSGSRDQPTSNVWKLSQENDGKFDQLFTQEADNLDGIAEDDSAPSHDDSWVRS
        MLSRLLPKPSHFRLL LISTK PAQTP+F LL R  ST+NNGSNNN NSGSRDQPTSNVWK+SQENDG FDQLFTQEAD+LD IAEDDSAP +DDSWV S
Subjt:  MLSRLLPKPSHFRLLALISTKAPAQTPTFRLLPRFLSTNNNGSNNNNNSGSRDQPTSNVWKLSQENDGKFDQLFTQEADNLDGIAEDDSAPSHDDSWVRS

Query:  KDGDQGAEGDIFASVEKEIRGNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIQEDAVEIGGSRDEIKEVDSKSSEDAKKLEKEEQELTAILKG
        K  DQGAEGDIFAS+E+E+RGNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNI+E AVEIG S DE KEVDSKSSEDA+KLEKEEQELTAILKG
Subjt:  KDGDQGAEGDIFASVEKEIRGNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIQEDAVEIGGSRDEIKEVDSKSSEDAKKLEKEEQELTAILKG

XP_038874638.1 30S ribosomal protein S9, mitochondrial isoform X3 [Benincasa hispida]1.5e-8286.08Show/hide
Query:  MLSRLLPKPSHFRLLALISTKAPAQTPTFRLLPRFLSTNNNGSNNNNNSGSRDQPTSNVWKLSQENDGKFDQLFTQEADNLDGIAEDDSAPSHDDSWVRS
        MLSRLLPKPSHFRLL LISTK PAQTP+F LL R  ST+NNGSNNN NSGSRDQPTSNVWK+SQENDG FDQLFTQEAD+LD IAEDDSAP +DDSWV S
Subjt:  MLSRLLPKPSHFRLLALISTKAPAQTPTFRLLPRFLSTNNNGSNNNNNSGSRDQPTSNVWKLSQENDGKFDQLFTQEADNLDGIAEDDSAPSHDDSWVRS

Query:  KDGDQGAEGDIFASVEKEIRGNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIQEDAVEIGGSRDEIKEVDSKSSEDAKKLEKEEQELTAILKG
        K  DQGAEGDIFAS+E+E+RGNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNI+E AVEIG S DE KEVDSKSSEDA+KLEKEEQELTAILKG
Subjt:  KDGDQGAEGDIFASVEKEIRGNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIQEDAVEIGGSRDEIKEVDSKSSEDAKKLEKEEQELTAILKG

TrEMBL top hitse value%identityAlignment
A0A1S3ATW2 28S ribosomal protein S9, mitochondrial1.1e-7375.74Show/hide
Query:  MLSRLLPKPSHFRLLALISTKAPAQTPTFRLLPRFLSTNNNGSNNNNNSGSRDQPTSNVWKLSQENDGKFDQLFTQEADNLDGIAEDDSAPSHDDSWVRS
        MLSRLLPKPSH RLLALISTK PAQTP+F LLPRF STNNNGSNNNNNSGSRDQPTSN+WK+SQEND  FD+LFTQEADNLDGIAE+DSAP +DDSWV S
Subjt:  MLSRLLPKPSHFRLLALISTKAPAQTPTFRLLPRFLSTNNNGSNNNNNSGSRDQPTSNVWKLSQENDGKFDQLFTQEADNLDGIAEDDSAPSHDDSWVRS

Query:  KDGDQGAEGDIFASVEKEIRGNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIQEDAVEIGGSRDEIKEVDSKSSEDAKKLEK--------EEQELTAIL
        K GD+ AEGDIFAS+EKE++GNKDGDG + W   KKF+ WSLVE+EKSDVFNI+E   +IG  RDE+KEVD++S EDA+KLEK        EEQELTAIL
Subjt:  KDGDQGAEGDIFASVEKEIRGNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIQEDAVEIGGSRDEIKEVDSKSSEDAKKLEK--------EEQELTAIL

Query:  KG
        KG
Subjt:  KG

A0A5A7SLF3 28S ribosomal protein S95.6e-7575.61Show/hide
Query:  MLSRLLPKPSHFRLLALISTKAPAQTPTFRLLPRFLSTNNNGSNNNNNSGSRDQPTSNVWKLSQENDGKFDQLFTQEADNLDGIAEDDSAPSHDDSWVRS
        MLSRLLPKPSH RLLALISTK PAQTP+F LLPRF STNNNGSNNNNNSGSRDQPTSN+WK+SQEND  FD+LFTQEADNLDGIAE+DSAP +DDSWV S
Subjt:  MLSRLLPKPSHFRLLALISTKAPAQTPTFRLLPRFLSTNNNGSNNNNNSGSRDQPTSNVWKLSQENDGKFDQLFTQEADNLDGIAEDDSAPSHDDSWVRS

Query:  KDGDQGAEGDIFASVEKEIRGNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIQEDAVEIGGSRDEIKEVDSKSSEDAKKLEK--------EEQELTAIL
        K GD+ AEGDIFAS+EKE++GNKDGDG + W   KKF+ WSLVE+EKSDVFNI+E   +IG  RDE+KEVD++S EDA+KLEK        EEQELTAIL
Subjt:  KDGDQGAEGDIFASVEKEIRGNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIQEDAVEIGGSRDEIKEVDSKSSEDAKKLEK--------EEQELTAIL

Query:  KGKLF
        KGK F
Subjt:  KGKLF

A0A6J1DZS9 28S ribosomal protein S9, mitochondrial4.7e-8284.02Show/hide
Query:  MLSRLLPKPSHFRLLALISTKAPAQTPTFRLLPRFLSTNNNGSNNNNNSGSRDQPTSNVWKLSQENDGKFDQLFTQEADNLDGIAEDDSAPSHDDSWVRS
        MLSRLLPKPSHF+LLALISTK P Q+P+FRLLPRF STN+NGSNNN +SGSRDQPTSNVWKLSQENDG FDQLFTQ+ +NLDGIAEDDSA   DDSWVRS
Subjt:  MLSRLLPKPSHFRLLALISTKAPAQTPTFRLLPRFLSTNNNGSNNNNNSGSRDQPTSNVWKLSQENDGKFDQLFTQEADNLDGIAEDDSAPSHDDSWVRS

Query:  KDGDQGAEGDIFASVEKEIRGNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIQEDAVEIGGSRDEIKEVDSKSSEDAKKLEKEEQELTAILKG
        KDGD+GAEGD+FAS+EKEI+GNKDG GDNEWVTAKK+EPWSLVEEEKSDVFNI+E  VEIG SRDE +EVD  SSEDAKKLEKEEQELTA+LKG
Subjt:  KDGDQGAEGDIFASVEKEIRGNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIQEDAVEIGGSRDEIKEVDSKSSEDAKKLEKEEQELTAILKG

A0A6J1E6E6 28S ribosomal protein S9, mitochondrial4.7e-8285.57Show/hide
Query:  MLSRLLPKPSHFRLLALISTKAPAQTPTFRLLPRFLSTNNNGSNNNNNSGSRDQPTSNVWKLSQENDGKFDQLFTQEADNLDGIAEDDSAPSHDDSWVRS
        MLSRLLPKPSHFRLL LISTK PAQ+P F LLPRF S++NNGSNNN N GSRDQPTSNVWKLS+E+D  FDQLFTQEADNLDGIAEDDSAP++ DSWVRS
Subjt:  MLSRLLPKPSHFRLLALISTKAPAQTPTFRLLPRFLSTNNNGSNNNNNSGSRDQPTSNVWKLSQENDGKFDQLFTQEADNLDGIAEDDSAPSHDDSWVRS

Query:  KDGDQGAEGDIFASVEKEIRGNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIQEDAVEIGGSRDEIKEVDSKSSEDAKKLEKEEQELTAILKG
        +DGDQGA GDIFA VEKEIRGNKD DG NEWV A KFEPWSLVEEEKSDVFNIQEDAVEIG  RDEIKEVDS+SSEDA+KLEKEEQELTAILKG
Subjt:  KDGDQGAEGDIFASVEKEIRGNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIQEDAVEIGGSRDEIKEVDSKSSEDAKKLEKEEQELTAILKG

A0A6J1I7H1 28S ribosomal protein S9, mitochondrial7.3e-8385.57Show/hide
Query:  MLSRLLPKPSHFRLLALISTKAPAQTPTFRLLPRFLSTNNNGSNNNNNSGSRDQPTSNVWKLSQENDGKFDQLFTQEADNLDGIAEDDSAPSHDDSWVRS
        MLSRLLPKPSHFRLL LISTK PAQ P F +LPRF S++NNGSNNN N GSRDQPTSNVWKLS+E+D  FDQLFTQEADNLDGIAEDDSAP++DD+WVRS
Subjt:  MLSRLLPKPSHFRLLALISTKAPAQTPTFRLLPRFLSTNNNGSNNNNNSGSRDQPTSNVWKLSQENDGKFDQLFTQEADNLDGIAEDDSAPSHDDSWVRS

Query:  KDGDQGAEGDIFASVEKEIRGNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIQEDAVEIGGSRDEIKEVDSKSSEDAKKLEKEEQELTAILKG
        +DGDQGA GDIFA VEKEIRG+KDGDG NEWVTA K EPWSLVEEEKSDVFNIQEDAVEIG SRDEIKEVDS+SSEDA+KLEKEEQELTAILKG
Subjt:  KDGDQGAEGDIFASVEKEIRGNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIQEDAVEIGGSRDEIKEVDSKSSEDAKKLEKEEQELTAILKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTCTCGTTTACTTCCTAAACCCTCCCATTTCAGATTGCTCGCCTTGATTTCCACTAAAGCCCCAGCTCAAACTCCTACTTTTCGTCTTCTTCCTCGATTCCTCTC
CACCAATAACAATGGGAGTAACAACAATAACAACAGTGGAAGCAGAGACCAACCGACGAGCAATGTCTGGAAACTTTCCCAGGAGAACGACGGAAAATTTGACCAATTGT
TCACTCAGGAAGCTGACAACCTTGATGGCATTGCGGAGGACGATTCTGCTCCGAGCCACGACGATTCATGGGTGAGGTCGAAGGACGGGGATCAGGGTGCCGAGGGGGAC
ATTTTTGCGAGCGTGGAGAAGGAAATTCGAGGAAATAAAGATGGCGATGGTGATAATGAATGGGTTACGGCGAAAAAATTCGAGCCGTGGAGCTTGGTGGAGGAAGAAAA
GAGTGATGTCTTTAACATTCAAGAGGATGCAGTCGAAATTGGTGGATCCAGAGATGAGATTAAAGAAGTGGATAGTAAGAGCAGTGAGGACGCTAAGAAGCTCGAAAAGG
AGGAGCAGGAACTCACTGCCATCCTTAAAGGCAAGCTTTTCTCCCCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTTCTCGTTTACTTCCTAAACCCTCCCATTTCAGATTGCTCGCCTTGATTTCCACTAAAGCCCCAGCTCAAACTCCTACTTTTCGTCTTCTTCCTCGATTCCTCTC
CACCAATAACAATGGGAGTAACAACAATAACAACAGTGGAAGCAGAGACCAACCGACGAGCAATGTCTGGAAACTTTCCCAGGAGAACGACGGAAAATTTGACCAATTGT
TCACTCAGGAAGCTGACAACCTTGATGGCATTGCGGAGGACGATTCTGCTCCGAGCCACGACGATTCATGGGTGAGGTCGAAGGACGGGGATCAGGGTGCCGAGGGGGAC
ATTTTTGCGAGCGTGGAGAAGGAAATTCGAGGAAATAAAGATGGCGATGGTGATAATGAATGGGTTACGGCGAAAAAATTCGAGCCGTGGAGCTTGGTGGAGGAAGAAAA
GAGTGATGTCTTTAACATTCAAGAGGATGCAGTCGAAATTGGTGGATCCAGAGATGAGATTAAAGAAGTGGATAGTAAGAGCAGTGAGGACGCTAAGAAGCTCGAAAAGG
AGGAGCAGGAACTCACTGCCATCCTTAAAGGCAAGCTTTTCTCCCCCTAG
Protein sequenceShow/hide protein sequence
MLSRLLPKPSHFRLLALISTKAPAQTPTFRLLPRFLSTNNNGSNNNNNSGSRDQPTSNVWKLSQENDGKFDQLFTQEADNLDGIAEDDSAPSHDDSWVRSKDGDQGAEGD
IFASVEKEIRGNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIQEDAVEIGGSRDEIKEVDSKSSEDAKKLEKEEQELTAILKGKLFSP