CuGenDBv2

Gene ID	Lag0030729
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Reverse transcriptase
Genome location	chr11:842266..847037
RNA-Seq Expression	Lag0030729
Synteny	Lag0030729
Gene Ontology terms	GO:0006259 - DNA metabolic process (biological process) GO:0003676 - nucleic acid binding (molecular function)
InterPro domains	IPR000953 - Chromo/chromo shadow domain IPR005162 - Retrotransposon gag domain IPR012337 - Ribonuclease H-like superfamily IPR016197 - Chromo-like domain superfamily IPR023780 - Chromo domain IPR036397 - Ribonuclease H superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0032849.1 reverse transcriptase [Cucumis melo var. makuwa]

1.1e-167

64.57

Show/hide

Query:  MSSNKQLTKTHVERLVEIEKQLLYLREVPDAVRFVESRLEEISIKADKVDAVAGRVHGMPIQELMIRVENLESKAT--RPSSYERGDSSSGSAALMEERV
        MSS+    K   +RLVE+E+Q+LYL EVPD++R++ESRLEEIS K + +DAVAGRV G PIQELM RV+ LE+     R  +YERGDSS+GS A +EERV
Subjt:  MSSNKQLTKTHVERLVEIEKQLLYLREVPDAVRFVESRLEEISIKADKVDAVAGRVHGMPIQELMIRVENLESKAT--RPSSYERGDSSSGSAALMEERV

Query:  DGLDSSQKAIVQMVTDLSEDVKAALDVVRAEVADLSARLNLTMRAVGNQAPAGGAVQFNKVKVPEPKPFYGVRDAKALENFIFYLEQYFRATNTVTEESK
          LDSSQK +++M+  +SED +A LDVVR E+AD++ARL+LTMRA+ NQAPAGGA+  ++VK+PEPKPF G RDAKALEN+IF LEQYFRATNTVTEE+K
Subjt:  DGLDSSQKAIVQMVTDLSEDVKAALDVVRAEVADLSARLNLTMRAVGNQAPAGGAVQFNKVKVPEPKPFYGVRDAKALENFIFYLEQYFRATNTVTEESK

Query:  ITLATIHLADDAKLWWRSRFMDIQEGRCTIDSWERLKQELRSQFFPENVEILARRKLRELKHTGNIRDYVKQFSGLMLDIRDMSEKTKF-----------
        +TLAT+HL++DAKLWWRSRF+DIQ+GRCTID+W+ LK+ELRSQFFPENVEILARRKLRELKHTG+IR+YVKQF+GLMLDIRDMSEK K            
Subjt:  ITLATIHLADDAKLWWRSRFMDIQEGRCTIDSWERLKQELRSQFFPENVEILARRKLRELKHTGNIRDYVKQFSGLMLDIRDMSEKTKF-----------

Query:  ------SRVQDLSTAYAAAERLFDLSNDQSQDVRRNLGPSNGGNRNNRPGSPKSGGGDRQGGGDRRPFQQRGRNSWRGPHQQNNYHQMPPFCFICKGAHR
               RVQDL++AYAAAERLFDLSND SQD RR+   S+GG+RNNRP SPK+ GGDR+  GDRR +Q    NSWRG + Q N    P  CFICKG H 
Subjt:  ------SRVQDLSTAYAAAERLFDLSNDQSQDVRRNLGPSNGGNRNNRPGSPKSGGGDRQGGGDRRPFQQRGRNSWRGPHQQNNYHQMPPFCFICKGAHR

Query:  VSDCPKRAALQAFQATFDTDPEVEAAAVETEGPQVEVENNPRMGALKFLSALQKKVGETKEPLERGLMYVDAWVNHKSAKSTMVDSGATHNFMT
          +CP + A  AFQA+  +D + + +  E E  Q E  +NPRMGALKFLS+LQKKVGET  P+ERGLMYVD W+N K  KSTMVDSGATHNF+T
Subjt:  VSDCPKRAALQAFQATFDTDPEVEAAAVETEGPQVEVENNPRMGALKFLSALQKKVGETKEPLERGLMYVDAWVNHKSAKSTMVDSGATHNFMT

KAA0037220.1 reverse transcriptase [Cucumis melo var. makuwa]

2.0e-167

64.78

Show/hide

Query:  MSSNKQLTKTHVERLVEIEKQLLYLREVPDAVRFVESRLEEISIKADKVDAVAGRVHGMPIQELMIRVENLESKAT--RPSSYERGDSSSGSAALMEERV
        MSS+    K   +RLVE+E+Q+LYL EVPD++R++ESRLEEIS K + +DAVAGRV G PIQELM RV+ LE+     R  +YERGDSS+GS A +EERV
Subjt:  MSSNKQLTKTHVERLVEIEKQLLYLREVPDAVRFVESRLEEISIKADKVDAVAGRVHGMPIQELMIRVENLESKAT--RPSSYERGDSSSGSAALMEERV

Query:  DGLDSSQKAIVQMVTDLSEDVKAALDVVRAEVADLSARLNLTMRAVGNQAPAGGAVQFNKVKVPEPKPFYGVRDAKALENFIFYLEQYFRATNTVTEESK
          LDSSQK +++M+  +SED +A LDVVR E+AD++ARL+LTMRA+ NQAPAGGA+  ++VK+PEPKPF G RDAKALEN+IF LEQYFRATNTVTEE+K
Subjt:  DGLDSSQKAIVQMVTDLSEDVKAALDVVRAEVADLSARLNLTMRAVGNQAPAGGAVQFNKVKVPEPKPFYGVRDAKALENFIFYLEQYFRATNTVTEESK

Query:  ITLATIHLADDAKLWWRSRFMDIQEGRCTIDSWERLKQELRSQFFPENVEILARRKLRELKHTGNIRDYVKQFSGLMLDIRDMSEKTKF-----------
        +TLAT+HL++DAKLWWRSRF+DIQEGRCTID+W+ LK+ELRSQFFPENVEILARRKLRELKHTG+IR+YVKQF+GLMLDIRDMSEK K            
Subjt:  ITLATIHLADDAKLWWRSRFMDIQEGRCTIDSWERLKQELRSQFFPENVEILARRKLRELKHTGNIRDYVKQFSGLMLDIRDMSEKTKF-----------

Query:  ------SRVQDLSTAYAAAERLFDLSNDQSQDVRRNLGPSNGGNRNNRPGSPKSGGGDRQGGGDRRPFQQRGRNSWRGPHQQNNYHQMPPFCFICKGAHR
               RVQDL++AYAAAERLFDLSND SQD RR+   S+GG+RNNRP SPK+ GGDR+  GDRR  Q    NSWRG   Q N    P  CFICKG H 
Subjt:  ------SRVQDLSTAYAAAERLFDLSNDQSQDVRRNLGPSNGGNRNNRPGSPKSGGGDRQGGGDRRPFQQRGRNSWRGPHQQNNYHQMPPFCFICKGAHR

Query:  VSDCPKRAALQAFQATFDTDPEVEAAAVETEGPQVEVENNPRMGALKFLSALQKKVGETKEPLERGLMYVDAWVNHKSAKSTMVDSGATHNFMT
          +CP + A  AFQA+  +D + + +  E E  Q E  +NPRMGALKFLS+LQKKVGET  P+ERGLMYVD W+N K  KSTMVDSGATHNF+T
Subjt:  VSDCPKRAALQAFQATFDTDPEVEAAAVETEGPQVEVENNPRMGALKFLSALQKKVGETKEPLERGLMYVDAWVNHKSAKSTMVDSGATHNFMT

KAA0063412.1 reverse transcriptase [Cucumis melo var. makuwa]

2.0e-167

64.78

Show/hide

Query:  MSSNKQLTKTHVERLVEIEKQLLYLREVPDAVRFVESRLEEISIKADKVDAVAGRVHGMPIQELMIRVENLESKAT--RPSSYERGDSSSGSAALMEERV
        MSS+    K   +RLVE+E+Q+LYL EVPD++R++ESRLEEIS K + +DAVAGRV G PIQELM RV+ LE+     R  +YERGDSS+GS A +EERV
Subjt:  MSSNKQLTKTHVERLVEIEKQLLYLREVPDAVRFVESRLEEISIKADKVDAVAGRVHGMPIQELMIRVENLESKAT--RPSSYERGDSSSGSAALMEERV

Query:  DGLDSSQKAIVQMVTDLSEDVKAALDVVRAEVADLSARLNLTMRAVGNQAPAGGAVQFNKVKVPEPKPFYGVRDAKALENFIFYLEQYFRATNTVTEESK
          LDSSQK +++M+  +SED +A LDVVR E+AD++ARL+LTMRA+ NQAPAGGA+  ++VK+PEPKPF G RDAKALEN+IF LEQYFRATNTVTEE+K
Subjt:  DGLDSSQKAIVQMVTDLSEDVKAALDVVRAEVADLSARLNLTMRAVGNQAPAGGAVQFNKVKVPEPKPFYGVRDAKALENFIFYLEQYFRATNTVTEESK

Query:  ITLATIHLADDAKLWWRSRFMDIQEGRCTIDSWERLKQELRSQFFPENVEILARRKLRELKHTGNIRDYVKQFSGLMLDIRDMSEKTKF-----------
        +TLAT+HL++DAKLWWRSRF+DIQEGRCTID+W+ LK+ELRSQFFPENVEILARRKLRELKHTG+IR+YVKQF+GLMLDIRDMSEK K            
Subjt:  ITLATIHLADDAKLWWRSRFMDIQEGRCTIDSWERLKQELRSQFFPENVEILARRKLRELKHTGNIRDYVKQFSGLMLDIRDMSEKTKF-----------

Query:  ------SRVQDLSTAYAAAERLFDLSNDQSQDVRRNLGPSNGGNRNNRPGSPKSGGGDRQGGGDRRPFQQRGRNSWRGPHQQNNYHQMPPFCFICKGAHR
               RVQDL++AYAAAERLFDLSND SQD RR+   S+GG+RNNRP SPK+ GGDR+  GDRR  Q    NSWRG   Q N    P  CFICKG H 
Subjt:  ------SRVQDLSTAYAAAERLFDLSNDQSQDVRRNLGPSNGGNRNNRPGSPKSGGGDRQGGGDRRPFQQRGRNSWRGPHQQNNYHQMPPFCFICKGAHR

Query:  VSDCPKRAALQAFQATFDTDPEVEAAAVETEGPQVEVENNPRMGALKFLSALQKKVGETKEPLERGLMYVDAWVNHKSAKSTMVDSGATHNFMT
          +CP + A  AFQA+  +D + + +  E E  Q E  +NPRMGALKFLS+LQKKVGET  P+ERGLMYVD W+N K  KSTMVDSGATHNF+T
Subjt:  VSDCPKRAALQAFQATFDTDPEVEAAAVETEGPQVEVENNPRMGALKFLSALQKKVGETKEPLERGLMYVDAWVNHKSAKSTMVDSGATHNFMT

TYK03099.1 reverse transcriptase [Cucumis melo var. makuwa]

3.9e-168

64.98

Show/hide

Query:  MSSNKQLTKTHVERLVEIEKQLLYLREVPDAVRFVESRLEEISIKADKVDAVAGRVHGMPIQELMIRVENLESKAT--RPSSYERGDSSSGSAALMEERV
        MSS+  L K   +RLVE+E+Q+LYL EVPD++R++ESRLEEIS K + +DAVAGRV G PIQELM RV+ LE+     R  +YERGDSS+GS A +EERV
Subjt:  MSSNKQLTKTHVERLVEIEKQLLYLREVPDAVRFVESRLEEISIKADKVDAVAGRVHGMPIQELMIRVENLESKAT--RPSSYERGDSSSGSAALMEERV

Query:  DGLDSSQKAIVQMVTDLSEDVKAALDVVRAEVADLSARLNLTMRAVGNQAPAGGAVQFNKVKVPEPKPFYGVRDAKALENFIFYLEQYFRATNTVTEESK
          LDSSQK +++M+  +SED +A LDVVR E+AD++ARL+LTMRA+ NQAPAGGA+  ++VK+PEPKPF G RDAKALEN+IF LEQYFRATNTVTEE+K
Subjt:  DGLDSSQKAIVQMVTDLSEDVKAALDVVRAEVADLSARLNLTMRAVGNQAPAGGAVQFNKVKVPEPKPFYGVRDAKALENFIFYLEQYFRATNTVTEESK

Query:  ITLATIHLADDAKLWWRSRFMDIQEGRCTIDSWERLKQELRSQFFPENVEILARRKLRELKHTGNIRDYVKQFSGLMLDIRDMSEKTKF-----------
        +TLAT+HL++DAKLWWRSRF+DIQEGRCTID+W+ LK+ELRSQFFPENVEILARRKLRELKHTG+IR+YVKQF+GLMLDIRDMSEK K            
Subjt:  ITLATIHLADDAKLWWRSRFMDIQEGRCTIDSWERLKQELRSQFFPENVEILARRKLRELKHTGNIRDYVKQFSGLMLDIRDMSEKTKF-----------

Query:  ------SRVQDLSTAYAAAERLFDLSNDQSQDVRRNLGPSNGGNRNNRPGSPKSGGGDRQGGGDRRPFQQRGRNSWRGPHQQNNYHQMPPFCFICKGAHR
               RVQDL++AYAAAERLFDLSND SQD RR+   S+GG+RNNRP SPK+ GGDR+  GDRR  Q    NSWRG   Q N    P  CFICKG H 
Subjt:  ------SRVQDLSTAYAAAERLFDLSNDQSQDVRRNLGPSNGGNRNNRPGSPKSGGGDRQGGGDRRPFQQRGRNSWRGPHQQNNYHQMPPFCFICKGAHR

Query:  VSDCPKRAALQAFQATFDTDPEVEAAAVETEGPQVEVENNPRMGALKFLSALQKKVGETKEPLERGLMYVDAWVNHKSAKSTMVDSGATHNFMT
          +CP + A  AFQA+  +D + + +  E E  Q E  +NPRMGALKFLS+LQKKVGET  P+ERGLMYVD W+N K  KSTMVDSGATHNF+T
Subjt:  VSDCPKRAALQAFQATFDTDPEVEAAAVETEGPQVEVENNPRMGALKFLSALQKKVGETKEPLERGLMYVDAWVNHKSAKSTMVDSGATHNFMT

TYK25585.1 uncharacterized protein E5676_scaffold352G007440 [Cucumis melo var. makuwa]

1.5e-167

64.78

Show/hide

Query:  MSSNKQLTKTHVERLVEIEKQLLYLREVPDAVRFVESRLEEISIKADKVDAVAGRVHGMPIQELMIRVENLESKAT--RPSSYERGDSSSGSAALMEERV
        MSS+    K   +RLVE+E+Q+LYL EVPD++R++ESRLEEIS K + +DAVAGRV G PIQELM RV+ LE+     R  +YERGDSS+GS A +EERV
Subjt:  MSSNKQLTKTHVERLVEIEKQLLYLREVPDAVRFVESRLEEISIKADKVDAVAGRVHGMPIQELMIRVENLESKAT--RPSSYERGDSSSGSAALMEERV

Query:  DGLDSSQKAIVQMVTDLSEDVKAALDVVRAEVADLSARLNLTMRAVGNQAPAGGAVQFNKVKVPEPKPFYGVRDAKALENFIFYLEQYFRATNTVTEESK
          LDSSQK +++M+  +SED +A LDVVR E+AD++ARL+LTMRA+ NQAPAGGA+  ++VK+PEPKPF G RDAKALEN+IF LEQYFRATNTVTEE+K
Subjt:  DGLDSSQKAIVQMVTDLSEDVKAALDVVRAEVADLSARLNLTMRAVGNQAPAGGAVQFNKVKVPEPKPFYGVRDAKALENFIFYLEQYFRATNTVTEESK

Query:  ITLATIHLADDAKLWWRSRFMDIQEGRCTIDSWERLKQELRSQFFPENVEILARRKLRELKHTGNIRDYVKQFSGLMLDIRDMSEKTKF-----------
        +TLAT+HL++DAKLWWRSRF+DIQEGRCTID+W+ LK+ELRSQFFPENVEILARRKLRELKHTG+IR+YVKQF+GLMLDIRDMSEK K            
Subjt:  ITLATIHLADDAKLWWRSRFMDIQEGRCTIDSWERLKQELRSQFFPENVEILARRKLRELKHTGNIRDYVKQFSGLMLDIRDMSEKTKF-----------

Query:  ------SRVQDLSTAYAAAERLFDLSNDQSQDVRRNLGPSNGGNRNNRPGSPKSGGGDRQGGGDRRPFQQRGRNSWRGPHQQNNYHQMPPFCFICKGAHR
               RVQDL++AYAAAERLFDLSND SQD RR+   S+GG+RNNRP SPK+ GGDR+  GDRR  Q    NSWRG   Q N    P  CFICKG H 
Subjt:  ------SRVQDLSTAYAAAERLFDLSNDQSQDVRRNLGPSNGGNRNNRPGSPKSGGGDRQGGGDRRPFQQRGRNSWRGPHQQNNYHQMPPFCFICKGAHR

Query:  VSDCPKRAALQAFQATFDTDPEVEAAAVETEGPQVEVENNPRMGALKFLSALQKKVGETKEPLERGLMYVDAWVNHKSAKSTMVDSGATHNFMT
          +CP + A  AFQA+  +D + + +  E E  Q E  +NPRMGALKFLS+LQKKVGET  P+ERGLMYVD W+N K  KSTMVDSGATHNF+T
Subjt:  VSDCPKRAALQAFQATFDTDPEVEAAAVETEGPQVEVENNPRMGALKFLSALQKKVGETKEPLERGLMYVDAWVNHKSAKSTMVDSGATHNFMT

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SUK4 Reverse transcriptase

5.6e-168

64.57

Show/hide

Query:  MSSNKQLTKTHVERLVEIEKQLLYLREVPDAVRFVESRLEEISIKADKVDAVAGRVHGMPIQELMIRVENLESKAT--RPSSYERGDSSSGSAALMEERV
        MSS+    K   +RLVE+E+Q+LYL EVPD++R++ESRLEEIS K + +DAVAGRV G PIQELM RV+ LE+     R  +YERGDSS+GS A +EERV
Subjt:  MSSNKQLTKTHVERLVEIEKQLLYLREVPDAVRFVESRLEEISIKADKVDAVAGRVHGMPIQELMIRVENLESKAT--RPSSYERGDSSSGSAALMEERV

Query:  DGLDSSQKAIVQMVTDLSEDVKAALDVVRAEVADLSARLNLTMRAVGNQAPAGGAVQFNKVKVPEPKPFYGVRDAKALENFIFYLEQYFRATNTVTEESK
          LDSSQK +++M+  +SED +A LDVVR E+AD++ARL+LTMRA+ NQAPAGGA+  ++VK+PEPKPF G RDAKALEN+IF LEQYFRATNTVTEE+K
Subjt:  DGLDSSQKAIVQMVTDLSEDVKAALDVVRAEVADLSARLNLTMRAVGNQAPAGGAVQFNKVKVPEPKPFYGVRDAKALENFIFYLEQYFRATNTVTEESK

Query:  ITLATIHLADDAKLWWRSRFMDIQEGRCTIDSWERLKQELRSQFFPENVEILARRKLRELKHTGNIRDYVKQFSGLMLDIRDMSEKTKF-----------
        +TLAT+HL++DAKLWWRSRF+DIQ+GRCTID+W+ LK+ELRSQFFPENVEILARRKLRELKHTG+IR+YVKQF+GLMLDIRDMSEK K            
Subjt:  ITLATIHLADDAKLWWRSRFMDIQEGRCTIDSWERLKQELRSQFFPENVEILARRKLRELKHTGNIRDYVKQFSGLMLDIRDMSEKTKF-----------

Query:  ------SRVQDLSTAYAAAERLFDLSNDQSQDVRRNLGPSNGGNRNNRPGSPKSGGGDRQGGGDRRPFQQRGRNSWRGPHQQNNYHQMPPFCFICKGAHR
               RVQDL++AYAAAERLFDLSND SQD RR+   S+GG+RNNRP SPK+ GGDR+  GDRR +Q    NSWRG + Q N    P  CFICKG H 
Subjt:  ------SRVQDLSTAYAAAERLFDLSNDQSQDVRRNLGPSNGGNRNNRPGSPKSGGGDRQGGGDRRPFQQRGRNSWRGPHQQNNYHQMPPFCFICKGAHR

Query:  VSDCPKRAALQAFQATFDTDPEVEAAAVETEGPQVEVENNPRMGALKFLSALQKKVGETKEPLERGLMYVDAWVNHKSAKSTMVDSGATHNFMT
          +CP + A  AFQA+  +D + + +  E E  Q E  +NPRMGALKFLS+LQKKVGET  P+ERGLMYVD W+N K  KSTMVDSGATHNF+T
Subjt:  VSDCPKRAALQAFQATFDTDPEVEAAAVETEGPQVEVENNPRMGALKFLSALQKKVGETKEPLERGLMYVDAWVNHKSAKSTMVDSGATHNFMT

A0A5D3BRZ6 Reverse transcriptase

9.5e-168

64.78

Show/hide

Query:  MSSNKQLTKTHVERLVEIEKQLLYLREVPDAVRFVESRLEEISIKADKVDAVAGRVHGMPIQELMIRVENLESKAT--RPSSYERGDSSSGSAALMEERV
        MSS+    K   +RLVE+E+Q+LYL EVPD++R++ESRLEEIS K + +DAVAGRV G PIQELM RV+ LE+     R  +YERGDSS+GS A +EERV
Subjt:  MSSNKQLTKTHVERLVEIEKQLLYLREVPDAVRFVESRLEEISIKADKVDAVAGRVHGMPIQELMIRVENLESKAT--RPSSYERGDSSSGSAALMEERV

Query:  DGLDSSQKAIVQMVTDLSEDVKAALDVVRAEVADLSARLNLTMRAVGNQAPAGGAVQFNKVKVPEPKPFYGVRDAKALENFIFYLEQYFRATNTVTEESK
          LDSSQK +++M+  +SED +A LDVVR E+AD++ARL+LTMRA+ NQAPAGGA+  ++VK+PEPKPF G RDAKALEN+IF LEQYFRATNTVTEE+K
Subjt:  DGLDSSQKAIVQMVTDLSEDVKAALDVVRAEVADLSARLNLTMRAVGNQAPAGGAVQFNKVKVPEPKPFYGVRDAKALENFIFYLEQYFRATNTVTEESK

Query:  ITLATIHLADDAKLWWRSRFMDIQEGRCTIDSWERLKQELRSQFFPENVEILARRKLRELKHTGNIRDYVKQFSGLMLDIRDMSEKTKF-----------
        +TLAT+HL++DAKLWWRSRF+DIQEGRCTID+W+ LK+ELRSQFFPENVEILARRKLRELKHTG+IR+YVKQF+GLMLDIRDMSEK K            
Subjt:  ITLATIHLADDAKLWWRSRFMDIQEGRCTIDSWERLKQELRSQFFPENVEILARRKLRELKHTGNIRDYVKQFSGLMLDIRDMSEKTKF-----------

Query:  ------SRVQDLSTAYAAAERLFDLSNDQSQDVRRNLGPSNGGNRNNRPGSPKSGGGDRQGGGDRRPFQQRGRNSWRGPHQQNNYHQMPPFCFICKGAHR
               RVQDL++AYAAAERLFDLSND SQD RR+   S+GG+RNNRP SPK+ GGDR+  GDRR  Q    NSWRG   Q N    P  CFICKG H 
Subjt:  ------SRVQDLSTAYAAAERLFDLSNDQSQDVRRNLGPSNGGNRNNRPGSPKSGGGDRQGGGDRRPFQQRGRNSWRGPHQQNNYHQMPPFCFICKGAHR

Query:  VSDCPKRAALQAFQATFDTDPEVEAAAVETEGPQVEVENNPRMGALKFLSALQKKVGETKEPLERGLMYVDAWVNHKSAKSTMVDSGATHNFMT
          +CP + A  AFQA+  +D + + +  E E  Q E  +NPRMGALKFLS+LQKKVGET  P+ERGLMYVD W+N K  KSTMVDSGATHNF+T
Subjt:  VSDCPKRAALQAFQATFDTDPEVEAAAVETEGPQVEVENNPRMGALKFLSALQKKVGETKEPLERGLMYVDAWVNHKSAKSTMVDSGATHNFMT

A0A5D3BYE6 Reverse transcriptase

1.9e-168

64.98

Show/hide

Query:  MSSNKQLTKTHVERLVEIEKQLLYLREVPDAVRFVESRLEEISIKADKVDAVAGRVHGMPIQELMIRVENLESKAT--RPSSYERGDSSSGSAALMEERV
        MSS+  L K   +RLVE+E+Q+LYL EVPD++R++ESRLEEIS K + +DAVAGRV G PIQELM RV+ LE+     R  +YERGDSS+GS A +EERV
Subjt:  MSSNKQLTKTHVERLVEIEKQLLYLREVPDAVRFVESRLEEISIKADKVDAVAGRVHGMPIQELMIRVENLESKAT--RPSSYERGDSSSGSAALMEERV

Query:  DGLDSSQKAIVQMVTDLSEDVKAALDVVRAEVADLSARLNLTMRAVGNQAPAGGAVQFNKVKVPEPKPFYGVRDAKALENFIFYLEQYFRATNTVTEESK
          LDSSQK +++M+  +SED +A LDVVR E+AD++ARL+LTMRA+ NQAPAGGA+  ++VK+PEPKPF G RDAKALEN+IF LEQYFRATNTVTEE+K
Subjt:  DGLDSSQKAIVQMVTDLSEDVKAALDVVRAEVADLSARLNLTMRAVGNQAPAGGAVQFNKVKVPEPKPFYGVRDAKALENFIFYLEQYFRATNTVTEESK

Query:  ITLATIHLADDAKLWWRSRFMDIQEGRCTIDSWERLKQELRSQFFPENVEILARRKLRELKHTGNIRDYVKQFSGLMLDIRDMSEKTKF-----------
        +TLAT+HL++DAKLWWRSRF+DIQEGRCTID+W+ LK+ELRSQFFPENVEILARRKLRELKHTG+IR+YVKQF+GLMLDIRDMSEK K            
Subjt:  ITLATIHLADDAKLWWRSRFMDIQEGRCTIDSWERLKQELRSQFFPENVEILARRKLRELKHTGNIRDYVKQFSGLMLDIRDMSEKTKF-----------

Query:  ------SRVQDLSTAYAAAERLFDLSNDQSQDVRRNLGPSNGGNRNNRPGSPKSGGGDRQGGGDRRPFQQRGRNSWRGPHQQNNYHQMPPFCFICKGAHR
               RVQDL++AYAAAERLFDLSND SQD RR+   S+GG+RNNRP SPK+ GGDR+  GDRR  Q    NSWRG   Q N    P  CFICKG H 
Subjt:  ------SRVQDLSTAYAAAERLFDLSNDQSQDVRRNLGPSNGGNRNNRPGSPKSGGGDRQGGGDRRPFQQRGRNSWRGPHQQNNYHQMPPFCFICKGAHR

Query:  VSDCPKRAALQAFQATFDTDPEVEAAAVETEGPQVEVENNPRMGALKFLSALQKKVGETKEPLERGLMYVDAWVNHKSAKSTMVDSGATHNFMT
          +CP + A  AFQA+  +D + + +  E E  Q E  +NPRMGALKFLS+LQKKVGET  P+ERGLMYVD W+N K  KSTMVDSGATHNF+T
Subjt:  VSDCPKRAALQAFQATFDTDPEVEAAAVETEGPQVEVENNPRMGALKFLSALQKKVGETKEPLERGLMYVDAWVNHKSAKSTMVDSGATHNFMT

A0A5D3C4R1 Reverse transcriptase

9.5e-168

64.78

Show/hide

Query:  MSSNKQLTKTHVERLVEIEKQLLYLREVPDAVRFVESRLEEISIKADKVDAVAGRVHGMPIQELMIRVENLESKAT--RPSSYERGDSSSGSAALMEERV
        MSS+    K   +RLVE+E+Q+LYL EVPD++R++ESRLEEIS K + +DAVAGRV G PIQELM RV+ LE+     R  +YERGDSS+GS A +EERV
Subjt:  MSSNKQLTKTHVERLVEIEKQLLYLREVPDAVRFVESRLEEISIKADKVDAVAGRVHGMPIQELMIRVENLESKAT--RPSSYERGDSSSGSAALMEERV

Query:  DGLDSSQKAIVQMVTDLSEDVKAALDVVRAEVADLSARLNLTMRAVGNQAPAGGAVQFNKVKVPEPKPFYGVRDAKALENFIFYLEQYFRATNTVTEESK
          LDSSQK +++M+  +SED +A LDVVR E+AD++ARL+LTMRA+ NQAPAGGA+  ++VK+PEPKPF G RDAKALEN+IF LEQYFRATNTVTEE+K
Subjt:  DGLDSSQKAIVQMVTDLSEDVKAALDVVRAEVADLSARLNLTMRAVGNQAPAGGAVQFNKVKVPEPKPFYGVRDAKALENFIFYLEQYFRATNTVTEESK

Query:  ITLATIHLADDAKLWWRSRFMDIQEGRCTIDSWERLKQELRSQFFPENVEILARRKLRELKHTGNIRDYVKQFSGLMLDIRDMSEKTKF-----------
        +TLAT+HL++DAKLWWRSRF+DIQEGRCTID+W+ LK+ELRSQFFPENVEILARRKLRELKHTG+IR+YVKQF+GLMLDIRDMSEK K            
Subjt:  ITLATIHLADDAKLWWRSRFMDIQEGRCTIDSWERLKQELRSQFFPENVEILARRKLRELKHTGNIRDYVKQFSGLMLDIRDMSEKTKF-----------

Query:  ------SRVQDLSTAYAAAERLFDLSNDQSQDVRRNLGPSNGGNRNNRPGSPKSGGGDRQGGGDRRPFQQRGRNSWRGPHQQNNYHQMPPFCFICKGAHR
               RVQDL++AYAAAERLFDLSND SQD RR+   S+GG+RNNRP SPK+ GGDR+  GDRR  Q    NSWRG   Q N    P  CFICKG H 
Subjt:  ------SRVQDLSTAYAAAERLFDLSNDQSQDVRRNLGPSNGGNRNNRPGSPKSGGGDRQGGGDRRPFQQRGRNSWRGPHQQNNYHQMPPFCFICKGAHR

Query:  VSDCPKRAALQAFQATFDTDPEVEAAAVETEGPQVEVENNPRMGALKFLSALQKKVGETKEPLERGLMYVDAWVNHKSAKSTMVDSGATHNFMT
          +CP + A  AFQA+  +D + + +  E E  Q E  +NPRMGALKFLS+LQKKVGET  P+ERGLMYVD W+N K  KSTMVDSGATHNF+T
Subjt:  VSDCPKRAALQAFQATFDTDPEVEAAAVETEGPQVEVENNPRMGALKFLSALQKKVGETKEPLERGLMYVDAWVNHKSAKSTMVDSGATHNFMT

A0A5D3DQ20 Retrotrans_gag domain-containing protein

7.3e-168

64.78

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Query:  MSSNKQLTKTHVERLVEIEKQLLYLREVPDAVRFVESRLEEISIKADKVDAVAGRVHGMPIQELMIRVENLESKAT--RPSSYERGDSSSGSAALMEERV
        MSS+    K   +RLVE+E+Q+LYL EVPD++R++ESRLEEIS K + +DAVAGRV G PIQELM RV+ LE+     R  +YERGDSS+GS A +EERV
Subjt:  MSSNKQLTKTHVERLVEIEKQLLYLREVPDAVRFVESRLEEISIKADKVDAVAGRVHGMPIQELMIRVENLESKAT--RPSSYERGDSSSGSAALMEERV

Query:  DGLDSSQKAIVQMVTDLSEDVKAALDVVRAEVADLSARLNLTMRAVGNQAPAGGAVQFNKVKVPEPKPFYGVRDAKALENFIFYLEQYFRATNTVTEESK
          LDSSQK +++M+  +SED +A LDVVR E+AD++ARL+LTMRA+ NQAPAGGA+  ++VK+PEPKPF G RDAKALEN+IF LEQYFRATNTVTEE+K
Subjt:  DGLDSSQKAIVQMVTDLSEDVKAALDVVRAEVADLSARLNLTMRAVGNQAPAGGAVQFNKVKVPEPKPFYGVRDAKALENFIFYLEQYFRATNTVTEESK

Query:  ITLATIHLADDAKLWWRSRFMDIQEGRCTIDSWERLKQELRSQFFPENVEILARRKLRELKHTGNIRDYVKQFSGLMLDIRDMSEKTKF-----------
        +TLAT+HL++DAKLWWRSRF+DIQEGRCTID+W+ LK+ELRSQFFPENVEILARRKLRELKHTG+IR+YVKQF+GLMLDIRDMSEK K            
Subjt:  ITLATIHLADDAKLWWRSRFMDIQEGRCTIDSWERLKQELRSQFFPENVEILARRKLRELKHTGNIRDYVKQFSGLMLDIRDMSEKTKF-----------

Query:  ------SRVQDLSTAYAAAERLFDLSNDQSQDVRRNLGPSNGGNRNNRPGSPKSGGGDRQGGGDRRPFQQRGRNSWRGPHQQNNYHQMPPFCFICKGAHR
               RVQDL++AYAAAERLFDLSND SQD RR+   S+GG+RNNRP SPK+ GGDR+  GDRR  Q    NSWRG   Q N    P  CFICKG H 
Subjt:  ------SRVQDLSTAYAAAERLFDLSNDQSQDVRRNLGPSNGGNRNNRPGSPKSGGGDRQGGGDRRPFQQRGRNSWRGPHQQNNYHQMPPFCFICKGAHR

Query:  VSDCPKRAALQAFQATFDTDPEVEAAAVETEGPQVEVENNPRMGALKFLSALQKKVGETKEPLERGLMYVDAWVNHKSAKSTMVDSGATHNFMT
          +CP + A  AFQA+  +D + + +  E E  Q E  +NPRMGALKFLS+LQKKVGET  P+ERGLMYVD W+N K  KSTMVDSGATHNF+T
Subjt:  VSDCPKRAALQAFQATFDTDPEVEAAAVETEGPQVEVENNPRMGALKFLSALQKKVGETKEPLERGLMYVDAWVNHKSAKSTMVDSGATHNFMT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G13370.1 chromatin remodeling 5

2.3e-04

35.14

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Query:  DKEVEEILADRVRRTGKPRRDVQAFLVKWKGLPDAEISWERVEDLKSAAIKIAEFEQRRLTGTVAQSRYETLKT
        + +VE I+ADR+ + G     V  +LVKW+GL  AE +WE+  D+  A + I E++ R ++  V     E  +T
Subjt:  DKEVEEILADRVRRTGKPRRDVQAFLVKWKGLPDAEISWERVEDLKSAAIKIAEFEQRRLTGTVAQSRYETLKT

Sequences

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CDS sequence

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ATGGAGCGGTTCAACAGTATGCTCGAGGAGTACTCGCGTCATTTTATTGACGCCCGACAGAAAAATTGGGCCGAGATGCTTGATGTTGCTCAGTTCAGTTTCAACTGTCA
AAAGAGTTCAGCGACAGGAAAGACTCCCTTCGAGTTAGTATGTGGAAGACAGCCGTTGATGCCACATGTAATTGACCATCCTTATGCGGGGAAGAGTCCCCAAGCTTACA
ACTTCACTAAAGAGTGGAGACAGACATCAGAGATAGCCCGAGCGTACCTAGAGAAGGCATCAAAACCTGAGACCAGAACAGATCCGGTTCCGAGGGAAGAGAGACCAACG
CCTTGTCCGAAAGTACGAAGGCCCCGTCGAAGTGATCCAGAAGGTCGAAGACTCCGAGCGCAACGAAGTGACACGGCCCCAGTCACAATGCAGAATCTGAATGACAAAGA
AGTGGAAGAAATTTTGGCAGACAGAGTTCGTCGCACAGGTAAACCTCGTCGAGACGTTCAAGCGTTCCTGGTGAAGTGGAAAGGGCTCCCGGATGCTGAGATTAGTTGGG
AGCGAGTTGAAGATCTGAAGTCGGCTGCTATCAAGATCGCAGAGTTCGAGCAGCGTCGGTTGACAGGGACTGTCGCACAGTCGCGTTACGAGACCCTAAAGACCGCGATT
GTGACAGTTGGTATCAGAGCCCAGTTGGCTCCTGAATCAGAAAGCGAAATCATGTCGTCAAACAAGCAGTTGACGAAGACCCATGTGGAACGTTTAGTTGAGATTGAAAA
GCAGTTGCTCTACTTGAGGGAAGTCCCCGATGCTGTTCGGTTTGTGGAATCTCGACTAGAGGAGATTTCGATCAAGGCCGACAAAGTTGATGCGGTAGCTGGCCGCGTTC
ATGGAATGCCCATCCAAGAACTGATGATAAGGGTTGAGAACCTTGAAAGTAAAGCTACTCGACCTAGTAGCTACGAGCGTGGTGACAGCTCGTCGGGCTCTGCTGCCCTG
ATGGAGGAGCGCGTCGATGGCTTAGACAGCTCCCAGAAAGCTATAGTCCAGATGGTCACGGACTTGTCAGAAGACGTGAAAGCTGCCCTTGACGTGGTCAGGGCCGAAGT
GGCGGATCTGAGCGCCAGATTGAACCTCACGATGAGAGCAGTGGGGAACCAAGCCCCGGCAGGGGGTGCGGTCCAATTCAACAAAGTTAAAGTTCCAGAGCCAAAACCCT
TCTATGGGGTTCGTGATGCAAAGGCTCTTGAGAACTTCATTTTTTATCTCGAACAATATTTTCGAGCGACGAATACTGTGACCGAAGAGTCCAAGATAACATTGGCTACG
ATACATCTTGCTGATGATGCAAAGTTGTGGTGGAGGTCCCGATTCATGGACATCCAAGAGGGTCGTTGCACCATAGATAGTTGGGAAAGATTGAAACAGGAACTTCGTTC
TCAGTTTTTCCCTGAGAATGTGGAAATTTTGGCGAGGCGGAAGTTGAGAGAGCTCAAGCACACAGGCAACATCCGAGATTACGTGAAACAGTTCTCCGGATTGATGTTGG
ACATTCGCGATATGTCAGAGAAAACAAAGTTTTCTCGGGTGCAAGACCTTTCTACTGCCTATGCAGCGGCAGAGCGGCTGTTCGACCTCAGTAATGACCAGTCCCAGGAC
GTGAGACGGAATCTGGGCCCTTCTAATGGAGGAAACAGAAATAATCGACCAGGCTCCCCCAAAAGTGGGGGAGGAGACAGACAAGGAGGGGGAGATCGTAGACCCTTCCA
GCAGAGAGGCAGAAATTCGTGGCGAGGGCCACACCAACAGAACAACTACCATCAGATGCCCCCTTTCTGTTTCATATGCAAGGGGGCCCATCGGGTGTCTGATTGCCCGA
AGCGAGCAGCCCTCCAAGCTTTTCAAGCCACGTTTGACACCGATCCTGAAGTCGAAGCGGCAGCCGTAGAGACTGAGGGACCACAAGTTGAAGTTGAGAACAACCCCCGA
ATGGGGGCACTGAAATTCCTCTCCGCCCTCCAGAAGAAAGTGGGGGAGACCAAAGAACCATTAGAAAGAGGACTCATGTACGTTGATGCATGGGTGAATCACAAGTCGGC
CAAGAGCACGATGGTCGACTCGGGAGCCACCCATAACTTTATGACCATGACACCCCGCATCCCTTATTCCGGAGAATGTGGTTTCCATAATTTCTCTGGCGTCCGATTCC
CAATCTCGCCGGAAAATTGTGCAACGCCGATGATCTGA

mRNA sequence

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Protein sequence

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MERFNSMLEEYSRHFIDARQKNWAEMLDVAQFSFNCQKSSATGKTPFELVCGRQPLMPHVIDHPYAGKSPQAYNFTKEWRQTSEIARAYLEKASKPETRTDPVPREERPT
PCPKVRRPRRSDPEGRRLRAQRSDTAPVTMQNLNDKEVEEILADRVRRTGKPRRDVQAFLVKWKGLPDAEISWERVEDLKSAAIKIAEFEQRRLTGTVAQSRYETLKTAI
VTVGIRAQLAPESESEIMSSNKQLTKTHVERLVEIEKQLLYLREVPDAVRFVESRLEEISIKADKVDAVAGRVHGMPIQELMIRVENLESKATRPSSYERGDSSSGSAAL
MEERVDGLDSSQKAIVQMVTDLSEDVKAALDVVRAEVADLSARLNLTMRAVGNQAPAGGAVQFNKVKVPEPKPFYGVRDAKALENFIFYLEQYFRATNTVTEESKITLAT
IHLADDAKLWWRSRFMDIQEGRCTIDSWERLKQELRSQFFPENVEILARRKLRELKHTGNIRDYVKQFSGLMLDIRDMSEKTKFSRVQDLSTAYAAAERLFDLSNDQSQD
VRRNLGPSNGGNRNNRPGSPKSGGGDRQGGGDRRPFQQRGRNSWRGPHQQNNYHQMPPFCFICKGAHRVSDCPKRAALQAFQATFDTDPEVEAAAVETEGPQVEVENNPR
MGALKFLSALQKKVGETKEPLERGLMYVDAWVNHKSAKSTMVDSGATHNFMTMTPRIPYSGECGFHNFSGVRFPISPENCATPMI

Lag0030729 (gene) of Sponge gourd (AG-4) v1 genome