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Lag0030749 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0030749
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionacidic endochitinase-like
Genome locationchr11:1022665..1024937
RNA-Seq ExpressionLag0030749
SyntenyLag0030749
Gene Ontology termsGO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR017853 - Glycoside hydrolase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_010679280.1 PREDICTED: hevamine-A [Beta vulgaris subsp. vulgaris]2.8e-1050Show/hide
Query:  VRFPIKPS----SKN--SFYGVWNGWQKIPAQKVFLEIRTDPKI--GGFIPLGVLIVDILPKIKESPLYGGVMLWGNDNRYSDEIKKY
        VRF   PS    +KN  +F+  WN W  I A KVFL +   PK    GFIP+ VL   +LP IK+SP YGGVMLW   +RY D+I KY
Subjt:  VRFPIKPS----SKN--SFYGVWNGWQKIPAQKVFLEIRTDPKI--GGFIPLGVLIVDILPKIKESPLYGGVMLWGNDNRYSDEIKKY

XP_021734101.1 hevamine-A-like [Chenopodium quinoa]3.3e-1148.86Show/hide
Query:  VRFPIKPS------SKNSFYGVWNGWQKIPAQKVFLEIRTDPKIG--GFIPLGVLIVDILPKIKESPLYGGVMLWGNDNRYSDEIKKY
        VRF   PS      +K +F+  WN W  I A+ VFL +   PK    GFIP+ VL   +LP IK+SP YGGVMLW   +RYSD+I+KY
Subjt:  VRFPIKPS------SKNSFYGVWNGWQKIPAQKVFLEIRTDPKIG--GFIPLGVLIVDILPKIKESPLYGGVMLWGNDNRYSDEIKKY

XP_021764259.1 hevamine-A-like [Chenopodium quinoa]5.3e-0945.45Show/hide
Query:  VRFPIKPS------SKNSFYGVWNGWQKIPAQKVFLEIRTDPKIG--GFIPLGVLIVDILPKIKESPLYGGVMLWGNDNRYSDEIKKY
        VRF   PS      +K +F+  WN W  I  + VFL +    K    GFIP+ VL   +LP IK+SP YGGVMLW   +RY D+I+KY
Subjt:  VRFPIKPS------SKNSFYGVWNGWQKIPAQKVFLEIRTDPKIG--GFIPLGVLIVDILPKIKESPLYGGVMLWGNDNRYSDEIKKY

XP_022157128.1 acidic endochitinase-like [Momordica charantia]9.0e-0949.32Show/hide
Query:  NSFYGVWNGWQKIPAQKVFLEIRTDPKI---GGFIPLGVLIVDILPKIKESPLYGGVMLWGN--DNRYSDEIK
        +S    WN W   PA  +F+ +   P+    GGFIP  VLI  +LP IK SP YGGVMLW    DN YSD IK
Subjt:  NSFYGVWNGWQKIPAQKVFLEIRTDPKI---GGFIPLGVLIVDILPKIKESPLYGGVMLWGN--DNRYSDEIK

XP_023522921.1 acidic endochitinase-like [Cucurbita pepo subsp. pepo]1.2e-0850.68Show/hide
Query:  NSFYGVWNGWQKIPAQKVFLEIRTDPKI---GGFIPLGVLIVDILPKIKESPLYGGVMLWGN--DNRYSDEIK
        N+    WN W   PA K+F+ +   P+    GGFIP  VLI  ILP IK S  YGGVMLW    DN YSD IK
Subjt:  NSFYGVWNGWQKIPAQKVFLEIRTDPKI---GGFIPLGVLIVDILPKIKESPLYGGVMLWGN--DNRYSDEIK

TrEMBL top hitse value%identityAlignment
A0A1U8BLW8 acidic endochitinase-like7.4e-0947.22Show/hide
Query:  NSFYGVWNGWQKIPAQKVFLEIRTDPKI--GGFIPLGVLIVDILPKIKESPLYGGVMLWGN--DNRYSDEIK
        N+    WN W  I A K+FL +   P    GGFIP   L+  +LP I+ SP YGGVMLW    DN YS  IK
Subjt:  NSFYGVWNGWQKIPAQKVFLEIRTDPKI--GGFIPLGVLIVDILPKIKESPLYGGVMLWGN--DNRYSDEIK

A0A498KLH8 Glyco_hydro_18 domain-containing protein1.7e-0850.72Show/hide
Query:  WNGWQKIPAQKVFLEIRTDPKI---GGFIPLGVLIVDILPKIKESPLYGGVMLWGN----DNRYSDEIK
        WN W  +PA +VFL I   P+    GGFIP   L   +LP IK+SP YGG+MLWG     DN YS  IK
Subjt:  WNGWQKIPAQKVFLEIRTDPKI---GGFIPLGVLIVDILPKIKESPLYGGVMLWGN----DNRYSDEIK

A0A6J1DSK8 acidic endochitinase-like4.3e-0949.32Show/hide
Query:  NSFYGVWNGWQKIPAQKVFLEIRTDPKI---GGFIPLGVLIVDILPKIKESPLYGGVMLWGN--DNRYSDEIK
        +S    WN W   PA  +F+ +   P+    GGFIP  VLI  +LP IK SP YGGVMLW    DN YSD IK
Subjt:  NSFYGVWNGWQKIPAQKVFLEIRTDPKI---GGFIPLGVLIVDILPKIKESPLYGGVMLWGN--DNRYSDEIK

A0A6J1H309 acidic endochitinase-like1.3e-0849.32Show/hide
Query:  NSFYGVWNGWQKIPAQKVFLEIRTDPKI---GGFIPLGVLIVDILPKIKESPLYGGVMLWGN--DNRYSDEIK
        N+    WN W   PA K+F+ +   P+    GGFIP  VLI  ILP IK +  YGGVMLW    DN YSD IK
Subjt:  NSFYGVWNGWQKIPAQKVFLEIRTDPKI---GGFIPLGVLIVDILPKIKESPLYGGVMLWGN--DNRYSDEIK

A0A803L9K1 Uncharacterized protein1.7e-0846.84Show/hide
Query:  VRFPIKPS------SKNSFYGVWNGWQKIPAQKVFLEIRTDPKIG--GFIPLGVLIVDILPKIKESPLYGGVMLWGNDN
        VRF   PS      +K +F+  WN W  I A+ VFL +   PK    GFIP+ VL   +LP IK+SP YGGVMLW + N
Subjt:  VRFPIKPS------SKNSFYGVWNGWQKIPAQKVFLEIRTDPKIG--GFIPLGVLIVDILPKIKESPLYGGVMLWGNDN

SwissProt top hitse value%identityAlignment
P17541 Acidic endochitinase8.4e-1049.25Show/hide
Query:  WNGWQKIPAQKVFLEI---RTDPKIGGFIPLGVLIVDILPKIKESPLYGGVMLWGN--DNRYSDEIK
        WN W   P  K+++ +   R     GGFIP  VLI  +LP IK S  YGGVMLW    DN YSD IK
Subjt:  WNGWQKIPAQKVFLEI---RTDPKIGGFIPLGVLIVDILPKIKESPLYGGVMLWGN--DNRYSDEIK

P23472 Hevamine-A6.0e-0844.59Show/hide
Query:  NSFYGVWNGW-QKIPAQKVFLEIRTDPKI--GGFIPLGVLIVDILPKIKESPLYGGVMLWG----NDNRYSDEI
        N+    WN W   I A K+FL +   P+    G++P  VLI  ILP+IK+SP YGGVMLW     + N YS  I
Subjt:  NSFYGVWNGW-QKIPAQKVFLEIRTDPKI--GGFIPLGVLIVDILPKIKESPLYGGVMLWG----NDNRYSDEI

P29060 Acidic endochitinase1.2e-0844.59Show/hide
Query:  SKNSFYGVWNGWQKIPAQKVFLEIRTDPKI--GGFIPLGVLIVDILPKIKESPLYGGVMLWGN--DNRYSDEIK
        S ++    WN W  I A K+FL +         GFIP  VL+  +LP I  SP YGGVMLW    DN YS  IK
Subjt:  SKNSFYGVWNGWQKIPAQKVFLEIRTDPKI--GGFIPLGVLIVDILPKIKESPLYGGVMLWGN--DNRYSDEIK

P36908 Acidic endochitinase1.0e-0741.33Show/hide
Query:  NSFYGVWNGWQKIPAQKVFLEIRTDPKI---GGFIPLGVLIVDILPKIKESPLYGGVMLWGNDN----RYSDEIK
        N+    WN W    A++VFL +         GG IP  VL   +LP IK SP YGGVM+W   N     YS+ IK
Subjt:  NSFYGVWNGWQKIPAQKVFLEIRTDPKI---GGFIPLGVLIVDILPKIKESPLYGGVMLWGNDN----RYSDEIK

P36910 Acidic endochitinase SE24.6e-0841.33Show/hide
Query:  SSKNSFYGVWNGWQKIPAQKVFLEI--RTDPKIGGFIPLGVLIVDILPKIKESPLYGGVMLWGN--DNRYSDEIK
        +S ++    WN W  + A ++FL +   TD    GFIP   L   +LP IK S  YGGVMLW    D+ YS  IK
Subjt:  SSKNSFYGVWNGWQKIPAQKVFLEI--RTDPKIGGFIPLGVLIVDILPKIKESPLYGGVMLWGN--DNRYSDEIK

Arabidopsis top hitse value%identityAlignment
AT5G24090.1 chitinase A1.4e-0742.17Show/hide
Query:  PIKPSSKN--SFYGVWNGW-QKIPAQKVFLEIRTDPKI--GGFIPLGVLIVDILPKIKESPLYGGVMLWG----NDNRYSDEI
        P   SS N  + +  WN W   I AQK FL +   P+    G+IP  VL   ILP +K+S  YGGVMLW     + N YS  I
Subjt:  PIKPSSKN--SFYGVWNGW-QKIPAQKVFLEIRTDPKI--GGFIPLGVLIVDILPKIKESPLYGGVMLWG----NDNRYSDEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAATTTTGGACCACCCCGATGCACAAGGAGCTGACGAGGACAATCGGACAGAAATCGGACTGGAAGATGGACTCGGGCGGGGAAACGGGCCAATGGATCCCCCTTC
ATCTACAAATTTATCGTTGGTGGCACGTGAATGTCAGGGCTTTCTAGGCGCTCGGAGGCGATCCTGGACTGAACTGAGTGAAACTGGACCGAGGCCGAGCAGGCCCAATC
CCTTTGGCTCGCTCTCCTCCAGAGTCCGCTTCCCGATCAAGCCTTCGTCTAAGAACAGCTTCTATGGTGTATGGAATGGTTGGCAGAAGATTCCAGCTCAGAAAGTGTTC
TTGGAAATACGAACAGATCCTAAAATTGGTGGATTTATTCCTCTAGGGGTCCTTATTGTCGATATTCTTCCCAAAATTAAGGAGTCTCCCTTGTATGGAGGAGTTATGCT
TTGGGGTAACGACAATCGATATAGTGATGAAATTAAGAAGTACGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTAATTTTGGACCACCCCGATGCACAAGGAGCTGACGAGGACAATCGGACAGAAATCGGACTGGAAGATGGACTCGGGCGGGGAAACGGGCCAATGGATCCCCCTTC
ATCTACAAATTTATCGTTGGTGGCACGTGAATGTCAGGGCTTTCTAGGCGCTCGGAGGCGATCCTGGACTGAACTGAGTGAAACTGGACCGAGGCCGAGCAGGCCCAATC
CCTTTGGCTCGCTCTCCTCCAGAGTCCGCTTCCCGATCAAGCCTTCGTCTAAGAACAGCTTCTATGGTGTATGGAATGGTTGGCAGAAGATTCCAGCTCAGAAAGTGTTC
TTGGAAATACGAACAGATCCTAAAATTGGTGGATTTATTCCTCTAGGGGTCCTTATTGTCGATATTCTTCCCAAAATTAAGGAGTCTCCCTTGTATGGAGGAGTTATGCT
TTGGGGTAACGACAATCGATATAGTGATGAAATTAAGAAGTACGACTAA
Protein sequenceShow/hide protein sequence
MVILDHPDAQGADEDNRTEIGLEDGLGRGNGPMDPPSSTNLSLVARECQGFLGARRRSWTELSETGPRPSRPNPFGSLSSRVRFPIKPSSKNSFYGVWNGWQKIPAQKVF
LEIRTDPKIGGFIPLGVLIVDILPKIKESPLYGGVMLWGNDNRYSDEIKKYD