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Lag0030753 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0030753
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr11:1061443..1064993
RNA-Seq ExpressionLag0030753
SyntenyLag0030753
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025376.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.1e-1477.78Show/hide
Query:  EKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATIK
        EKVDDP YCKYHRVI HPVE+CFVLK+LILKLA+E KIELD+DEVAQ+N   I+
Subjt:  EKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATIK

KAA0050543.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.2e-1478.85Show/hide
Query:  KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATI
        KVDDP YCKYHRVI HPVE+CFVLK+LILKLA+E KIELD+DEVAQ+N  T+
Subjt:  KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATI

KAA0058295.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.1e-1477.78Show/hide
Query:  EKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATIK
        EKVDDP YCKYHRVI HPVE+CFVLK+LILKLA+E KIELD+DEVAQ+N   I+
Subjt:  EKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATIK

TYK09793.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.1e-1477.78Show/hide
Query:  EKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATIK
        EKVDDP YCKYHRVI HPVE+CFVLK+LILKLA+E KIELD+DEVAQ+N   I+
Subjt:  EKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATIK

XP_022159413.1 uncharacterized protein LOC111025834 [Momordica charantia]1.6e-1475.93Show/hide
Query:  MEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATI
        M KVDDPKYCKYHRVI HPVE+CFVLK+ IL LA+EGKIELD +E+AQSN A +
Subjt:  MEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATI

TrEMBL top hitse value%identityAlignment
A0A5A7SHQ6 Retrotransposon gag protein1.0e-1477.78Show/hide
Query:  EKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATIK
        EKVDDP YCKYHRVI HPVE+CFVLK+LILKLA+E KIELD+DEVAQ+N   I+
Subjt:  EKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATIK

A0A5A7U3T4 Retrotransposon gag protein5.9e-1578.85Show/hide
Query:  KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATI
        KVDDP YCKYHRVI HPVE+CFVLK+LILKLA+E KIELD+DEVAQ+N  T+
Subjt:  KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATI

A0A5A7U974 Retrotransposon gag protein1.0e-1472.22Show/hide
Query:  MEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATI
        +EKVDDP YCKYHR+I HPVE+CFVLK+LILKLA+E KI+LD+DEVAQ+N   +
Subjt:  MEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATI

A0A5D3CD55 Ty3-gypsy retrotransposon protein1.0e-1477.78Show/hide
Query:  EKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATIK
        EKVDDP YCKYHRVI HPVE+CFVLK+LILKLA+E KIELD+DEVAQ+N   I+
Subjt:  EKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATIK

A0A6J1DYQ8 uncharacterized protein LOC1110258347.7e-1575.93Show/hide
Query:  MEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATI
        M KVDDPKYCKYHRVI HPVE+CFVLK+ IL LA+EGKIELD +E+AQSN A +
Subjt:  MEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAGTCGATGATCCCAAGTATTGCAAGTATCATCGAGTTATTGGTCATCCAGTGGAAAGATGTTTCGTCCTAAAGGACTTAATTTTAAAGCTGGCTAAGGAAGG
CAAAATTGAGCTCGACCTTGATGAAGTAGCTCAATCAAATCTTGCTACAATCAAAGGAAAGAGCAAGCATCAAAGAAAGAAGGATCCTAAGAAACTTCAACCCAAGAGGA
AGAGAAGTAAAAAGTTTTCTCAACCTCGACAACCGGATCTGATCAAGACCATGACAAAGATAAGAGCTTTTAAATGTAAAAGCTCCTTATCGCAAGAGCCTAAACTGCAT
GATGCTCCTAGCCCACACGAGCTTAAAAGGTTCTTCGATGCAGTTCCTTCTCTCCAAGTTCGAGGGTCCTTACATTGTACGCTATTGCGTTGTTCCTTCTCCAAGTTCGA
AGGTTCTTCGTTGTATCCTGCTGCGTTGTTCCTTCTCTCCAAGGTCGAGGGTCCTTACATTGTACGCTATTGCGTTGTTCCTTCTCCAAGTTCGAAGGTTCTTCGTTGTA
TCCTGCTGCGTTGTTCCTTCTCCAAGTTCGAGGGTTCTCAGTTGTACGACTGCTACGTTGTTCCTCCTCCAAGTGTGAAGGATCTTATGTGGTGCGTTGTTGCATTGTTC
CCTCTTCTCTCAAGTTCGATGGTTCTCACGCAGCTTCGCTGGAGTTTCTTCTCCCCAAGTTCGAAGGTTCTCACGCGCTCCGTTGCAGTTCCTTCTTTTCAAGGTCGAAG
GTTCTCACTCGCTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCACTTCGCTGCAGTTCCTTCTCCCAAATTCGAAGGTTCTCACGCGCTTCGCTCTGCAAT
TCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGTAGTTCCTTCCCCCAAGTTTGAAGGTTCTCACACGCTTCGCTGCAATTCCTTCCTCCAAGTTCAAAGTTCC
TTCCCCCCAAGTTCGAAGGTTCTTACGCGCTTTGCTGCAGTTCCTTCCTCACAGTTCAAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTC
ACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTTCGCGCTGC
GCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTTGCTCCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTG
CTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCCTCTCTCCACTGTTCCTTCCTCCAAGTTCGAAGGTTC
TCATGCGCTTCGTTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTCCGTTGCAGTTCCTTCT
TTTCAAGGTCGAAGGTTCTCACTCGCTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAATGTTCACGCAATTCGCTGCAGTTCCTTCTCCCAAATTCGAAGGTTCTCACACG
CTTCGCTCTGCAATTCCTTCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGTAGTTCCTTCCCCCCAAGTTTGAAGGTTCTCACACGCTTCGCTGCAATTCCTTCCTC
CAAGTTCAAAGTTCCTTCCTCACAGTTCAAAGGTCCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCC
AAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTTCGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTT
CGAAGGTTCTCACTCGCTTCGCTGCAGTTCCTTCCTCCAAATTCGAAGGTTTCGAAGGTTCTCAAGCGCTGTGATTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCT
CATGCGCTTTGTTGCTCCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCC
AAGTTCGAAGGCGCCTCTCTCCACTGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAG
CTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTACTCCTTCTCCAAGTTCGAAGGCGTTTCTCTC
CGCTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCTACTGTTCCTTCTCCAAGTTCGAAGGTGCTTCTCTCCA
CCCCTCTTTTTGAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAGTTCGAAGGTTCACCGTTGCTCCTTTTCAAATGTTTGGCGGCGGTTGACGTCCTCGTTCCGCTTCAT
CTTCAAATGTTGGCAGTTGACGGCGTTCGCTTCGCTTCATCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAAGTCGATGATCCCAAGTATTGCAAGTATCATCGAGTTATTGGTCATCCAGTGGAAAGATGTTTCGTCCTAAAGGACTTAATTTTAAAGCTGGCTAAGGAAGG
CAAAATTGAGCTCGACCTTGATGAAGTAGCTCAATCAAATCTTGCTACAATCAAAGGAAAGAGCAAGCATCAAAGAAAGAAGGATCCTAAGAAACTTCAACCCAAGAGGA
AGAGAAGTAAAAAGTTTTCTCAACCTCGACAACCGGATCTGATCAAGACCATGACAAAGATAAGAGCTTTTAAATGTAAAAGCTCCTTATCGCAAGAGCCTAAACTGCAT
GATGCTCCTAGCCCACACGAGCTTAAAAGGTTCTTCGATGCAGTTCCTTCTCTCCAAGTTCGAGGGTCCTTACATTGTACGCTATTGCGTTGTTCCTTCTCCAAGTTCGA
AGGTTCTTCGTTGTATCCTGCTGCGTTGTTCCTTCTCTCCAAGGTCGAGGGTCCTTACATTGTACGCTATTGCGTTGTTCCTTCTCCAAGTTCGAAGGTTCTTCGTTGTA
TCCTGCTGCGTTGTTCCTTCTCCAAGTTCGAGGGTTCTCAGTTGTACGACTGCTACGTTGTTCCTCCTCCAAGTGTGAAGGATCTTATGTGGTGCGTTGTTGCATTGTTC
CCTCTTCTCTCAAGTTCGATGGTTCTCACGCAGCTTCGCTGGAGTTTCTTCTCCCCAAGTTCGAAGGTTCTCACGCGCTCCGTTGCAGTTCCTTCTTTTCAAGGTCGAAG
GTTCTCACTCGCTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCACTTCGCTGCAGTTCCTTCTCCCAAATTCGAAGGTTCTCACGCGCTTCGCTCTGCAAT
TCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGTAGTTCCTTCCCCCAAGTTTGAAGGTTCTCACACGCTTCGCTGCAATTCCTTCCTCCAAGTTCAAAGTTCC
TTCCCCCCAAGTTCGAAGGTTCTTACGCGCTTTGCTGCAGTTCCTTCCTCACAGTTCAAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTC
ACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTTCGCGCTGC
GCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTTGCTCCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTG
CTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCCTCTCTCCACTGTTCCTTCCTCCAAGTTCGAAGGTTC
TCATGCGCTTCGTTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTCCGTTGCAGTTCCTTCT
TTTCAAGGTCGAAGGTTCTCACTCGCTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAATGTTCACGCAATTCGCTGCAGTTCCTTCTCCCAAATTCGAAGGTTCTCACACG
CTTCGCTCTGCAATTCCTTCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGTAGTTCCTTCCCCCCAAGTTTGAAGGTTCTCACACGCTTCGCTGCAATTCCTTCCTC
CAAGTTCAAAGTTCCTTCCTCACAGTTCAAAGGTCCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCC
AAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTTCGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTT
CGAAGGTTCTCACTCGCTTCGCTGCAGTTCCTTCCTCCAAATTCGAAGGTTTCGAAGGTTCTCAAGCGCTGTGATTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCT
CATGCGCTTTGTTGCTCCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCC
AAGTTCGAAGGCGCCTCTCTCCACTGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAG
CTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTACTCCTTCTCCAAGTTCGAAGGCGTTTCTCTC
CGCTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCTACTGTTCCTTCTCCAAGTTCGAAGGTGCTTCTCTCCA
CCCCTCTTTTTGAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAGTTCGAAGGTTCACCGTTGCTCCTTTTCAAATGTTTGGCGGCGGTTGACGTCCTCGTTCCGCTTCAT
CTTCAAATGTTGGCAGTTGACGGCGTTCGCTTCGCTTCATCTTAA
Protein sequenceShow/hide protein sequence
MEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATIKGKSKHQRKKDPKKLQPKRKRSKKFSQPRQPDLIKTMTKIRAFKCKSSLSQEPKLH
DAPSPHELKRFFDAVPSLQVRGSLHCTLLRCSFSKFEGSSLYPAALFLLSKVEGPYIVRYCVVPSPSSKVLRCILLRCSFSKFEGSQLYDCYVVPPPSVKDLMWCVVALF
PLLSSSMVLTQLRWSFFSPSSKVLTRSVAVPSFQGRRFSLAALQFFLPKFEGSRTSLQFLLPNSKVLTRFALQFLPPSSKVLTRFAVVPSPKFEGSHTLRCNSFLQVQSS
FPPSSKVLTRFAAVPSSQFKGSHALRCSSFPQVRRFSRRFAAVPSSKFEGSHVASLQFLPPSLKVLTSLRFALRFVAVPSSKFEVPSSKFEGSHALRCSFLQVRRFSHAL
LQLLPPSSKVPSRASLAPSPSSKAPLSTVPSSKFEGSHALRCYLPPSSKVLSRAAAAPSSKFEGSHALRCSSFFSRSKVLTRCVAVLSPQVRMFTQFAAVPSPKFEGSHT
LRSAIPSPKFEGSHALRCSSFPPSLKVLTRFAAIPSSKFKVPSSQFKGPHALRCSSFPPSSKVLTSLRCSSFLQVRRFSRRFAAVPSSKFEGSHIASLRAALRCSSFLQV
RRFSLASLQFLPPNSKVSKVLKRCDSLQFLPPSSKVLMRFVAPSSKFEGSLTRCCSSFLQVRRFPHALRSLLLQVRRRLSPLFLPPSSKVLMRFVATFLQVRRFSHALLQ
LLPPSSKVPSRASLAPSPSSKALLSTTPSPSSKAFLSAAPSPSSKALLSTAPSPSSKALLSTVPSPSSKVLLSTPLFEGSPLRFSFSKFEGSPLLLFKCLAAVDVLVPLH
LQMLAVDGVRFASS