CuGenDBv2

Gene ID	Lag0030759
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	UBA domain-containing protein
Genome location	chr11:1121059..1123244
RNA-Seq Expression	Lag0030759
Synteny	Lag0030759
Gene Ontology terms	GO:0043162 - ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway (biological process) GO:0000813 - ESCRT I complex (cellular component) GO:0043130 - ubiquitin binding (molecular function)
InterPro domains	IPR009060 - UBA-like superfamily IPR015940 - Ubiquitin-associated domain IPR038870 - Ubiquitin-associated protein 1 IPR042575 - Ubiquitin-associated protein 1, C-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6605766.1 Ubiquitin-conjugating enzyme E2 10, partial [Cucurbita argyrosperma subsp. sororia]

8.1e-108

85.96

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Query:  MAYDYRNKPAHYDAHPSMYGPTASSSPSPSLHPMYAQSMYPRIGQQAPSPAPPVARLSSHHHSSS--PSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQI
        MAYDYRNKP +Y+AHP MYGP ASSSPSPS+HPMY QSMYPRIGQQ  SPAPPVAR+SSHHHSSS  PSPS PSSSGLGIRVTIKPEY IT PPQLSPQ+
Subjt:  MAYDYRNKPAHYDAHPSMYGPTASSSPSPSLHPMYAQSMYPRIGQQAPSPAPPVARLSSHHHSSS--PSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQI

Query:  GDVPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS
        GD+PRSNFQFDFEFEKKVLAEAEKE PNWNRFGLEHPPS+PVES+SSMGS GDPVVSKYVASGLSREAVS AVANYGDNPTKVQEFVKGYTLLREMGF S
Subjt:  GDVPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS

Query:  NKVVEALLMYDNDTDKAVAHFLGELTNRLMASSMV
        NKVVEALLMYDNDTDKAVAHFLG +   L  S+++
Subjt:  NKVVEALLMYDNDTDKAVAHFLGELTNRLMASSMV

KAG7035731.1 hypothetical protein SDJN02_02529 [Cucurbita argyrosperma subsp. argyrosperma]

4.0e-107

89.69

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Query:  MAYDYRNKPAHYDAHPSMYGPTASSSPSPSLHPMYAQSMYPRIGQQAPSPAPPVARLSSHHHSSS--PSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQI
        MAYDYRNKP +Y+AHP MYGP ASSSPSPS+HPMY QSMYPRIGQQ  SPAPPVAR+SSHHHSSS  PSPS PSSSGLGIRVTIKPEY IT PPQLSPQ+
Subjt:  MAYDYRNKPAHYDAHPSMYGPTASSSPSPSLHPMYAQSMYPRIGQQAPSPAPPVARLSSHHHSSS--PSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQI

Query:  GDVPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS
        GD+PRSNFQFDFEFEKKVLAEAEKE PNWNRFGLEHPPS+PVES+SSMGS GDPVVSKYVASGLSREAVS AVANYGDNPTKVQEFVKGYTLLREMGF S
Subjt:  GDVPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS

Query:  NKVVEALLMYDNDTDKAVAHFLG
        NKVVEALLMYDNDTDKAVAHFLG
Subjt:  NKVVEALLMYDNDTDKAVAHFLG

XP_022958203.1 uncharacterized protein LOC111459499 [Cucurbita moschata]

4.0e-107

89.69

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Query:  MAYDYRNKPAHYDAHPSMYGPTASSSPSPSLHPMYAQSMYPRIGQQAPSPAPPVARLSSHHHSSS--PSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQI
        MAYDYRNKP +Y+AHP MYGP ASSSPSPS+HPMY QSMYPRIGQQ  SPAPPVAR+SSHHHSSS  PSPS PSSSGLGIRVTIKPEY IT PPQLSPQ+
Subjt:  MAYDYRNKPAHYDAHPSMYGPTASSSPSPSLHPMYAQSMYPRIGQQAPSPAPPVARLSSHHHSSS--PSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQI

Query:  GDVPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS
        GD+PRSNFQFDFEFEKKVLAEAEKE PNWNRFGLEHPPS+PVES+SSMGS GDPVVSKYVASGLSREAVS AVANYGDNPTKVQEFVKGYTLLREMGF S
Subjt:  GDVPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS

Query:  NKVVEALLMYDNDTDKAVAHFLG
        NKVVEALLMYDNDTDKAVAHFLG
Subjt:  NKVVEALLMYDNDTDKAVAHFLG

XP_023534738.1 uncharacterized protein LOC111796216 [Cucurbita pepo subsp. pepo]

8.9e-107

89.24

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Query:  MAYDYRNKPAHYDAHPSMYGPTASSSPSPSLHPMYAQSMYPRIGQQAPSPAPPVARLSSHHHSSS--PSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQI
        MAYDYRNKP +Y+AHP MYGP ASSSPSPS+HPMY QSMYPRIGQQ  SPAPPVAR+SSHHHSSS  PSPS PSSSGLGIRVTIKPEY IT PPQLSPQ+
Subjt:  MAYDYRNKPAHYDAHPSMYGPTASSSPSPSLHPMYAQSMYPRIGQQAPSPAPPVARLSSHHHSSS--PSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQI

Query:  GDVPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS
        GD+PRSNFQFDFEFEKKVLAEAEKE PNWNRFGLEHPPS+PVES+SSMGS GDPVV+KYVASGLSREAVS AVANYGDNPTKVQEFVKGYTLLREMGF S
Subjt:  GDVPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS

Query:  NKVVEALLMYDNDTDKAVAHFLG
        NKVVEALLMYDNDTDKAVAHFLG
Subjt:  NKVVEALLMYDNDTDKAVAHFLG

XP_038874870.1 uncharacterized protein LOC120067367 [Benincasa hispida]

8.9e-107

91.96

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Query:  MAYDYRNKPAHYDAHPSMYGPTASSSPSPSLHPMYAQSMYPRIGQQAPSPAPPVARLSSHHHSS--SPSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQI
        MAYDYRNKP HYDAHP MYGPTASSSPSPS HPMY+QSMYPRIGQQAPS   PVARLSSHHHSS  SPSPSP SSSGLGIRVTIKPEY IT PPQLSPQI
Subjt:  MAYDYRNKPAHYDAHPSMYGPTASSSPSPSLHPMYAQSMYPRIGQQAPSPAPPVARLSSHHHSS--SPSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQI

Query:  GDVPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVES-TSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFS
        GD+PRSNFQFDFEFEKKVLAEAEKE PNWNRFGLEH PSKPVES TSSM SIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFS
Subjt:  GDVPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVES-TSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFS

Query:  SNKVVEALLMYDNDTDKAVAHFLG
        S KVVEALLMYDNDTDKAVAHFLG
Subjt:  SNKVVEALLMYDNDTDKAVAHFLG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KNB8 Uncharacterized protein

4.0e-105

89.14

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Query:  MAYDYRNKPAHYDAHPSMYGPTASSSPSPSLHPMYAQSMYPRIGQQAPSPAPPVARLSSHHHSSSPSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQIGD
        MAYD+RN   HYD+H  MY  TASSSPSPS HPMY+ SMYPRIGQQAPS  PPVARLSSHH+SSSPSPSP SSSGLGIRVTIKPEY IT PPQLSPQ+GD
Subjt:  MAYDYRNKPAHYDAHPSMYGPTASSSPSPSLHPMYAQSMYPRIGQQAPSPAPPVARLSSHHHSSSPSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQIGD

Query:  VPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSSNK
        +PRSNFQFDFEFEKKVLAEAEKE PNWNRFGLEHPP KPVESTSSMGSIGDPVVSKYVASGL+REAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS K
Subjt:  VPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSSNK

Query:  VVEALLMYDNDTDKAVAHFLG
        VVEALLMYDNDTDKAVAHFLG
Subjt:  VVEALLMYDNDTDKAVAHFLG

A0A1S3AUC1 uncharacterized protein LOC103482940 isoform X2

1.4e-102

87.44

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Query:  MAYDYRNKPAHYDAHPSMYGPTASSSPSPSLHPMYAQSMYPRIGQQAPSPAPPVARLSSHHHSSSPSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQIGD
        MAYD+RN   HYD+HP MY  TASS+PSPS HPMY+QSMYPRIGQQAPS  PPVARLSSHHHSSSPS SP SSSGLGIRVTIKPEY IT PPQLSPQ+GD
Subjt:  MAYDYRNKPAHYDAHPSMYGPTASSSPSPSLHPMYAQSMYPRIGQQAPSPAPPVARLSSHHHSSSPSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQIGD

Query:  VPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSSNK
        +PRSNF FDFEFEKKVLAEAEKE PNWNRFGLE  P KPVESTSSMGSIGDP VSKYVASGL+REAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS K
Subjt:  VPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSSNK

Query:  VVEALLMYDNDTDKAVAHFLGEL
        VVEALLMYDNDTDKAVAHFLG+L
Subjt:  VVEALLMYDNDTDKAVAHFLGEL

A0A1S3AUG0 uncharacterized protein LOC103482940 isoform X1

7.1e-102

87.78

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Query:  MAYDYRNKPAHYDAHPSMYGPTASSSPSPSLHPMYAQSMYPRIGQQAPSPAPPVARLSSHHHSSSPSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQIGD
        MAYD+RN   HYD+HP MY  TASS+PSPS HPMY+QSMYPRIGQQAPS  PPVARLSSHHHSSSPS SP SSSGLGIRVTIKPEY IT PPQLSPQ+GD
Subjt:  MAYDYRNKPAHYDAHPSMYGPTASSSPSPSLHPMYAQSMYPRIGQQAPSPAPPVARLSSHHHSSSPSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQIGD

Query:  VPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSSNK
        +PRSNF FDFEFEKKVLAEAEKE PNWNRFGLE  P KPVESTSSMGSIGDP VSKYVASGL+REAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS K
Subjt:  VPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSSNK

Query:  VVEALLMYDNDTDKAVAHFLG
        VVEALLMYDNDTDKAVAHFLG
Subjt:  VVEALLMYDNDTDKAVAHFLG

A0A6J1H2H7 uncharacterized protein LOC111459499

1.9e-107

89.69

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Query:  MAYDYRNKPAHYDAHPSMYGPTASSSPSPSLHPMYAQSMYPRIGQQAPSPAPPVARLSSHHHSSS--PSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQI
        MAYDYRNKP +Y+AHP MYGP ASSSPSPS+HPMY QSMYPRIGQQ  SPAPPVAR+SSHHHSSS  PSPS PSSSGLGIRVTIKPEY IT PPQLSPQ+
Subjt:  MAYDYRNKPAHYDAHPSMYGPTASSSPSPSLHPMYAQSMYPRIGQQAPSPAPPVARLSSHHHSSS--PSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQI

Query:  GDVPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS
        GD+PRSNFQFDFEFEKKVLAEAEKE PNWNRFGLEHPPS+PVES+SSMGS GDPVVSKYVASGLSREAVS AVANYGDNPTKVQEFVKGYTLLREMGF S
Subjt:  GDVPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS

Query:  NKVVEALLMYDNDTDKAVAHFLG
        NKVVEALLMYDNDTDKAVAHFLG
Subjt:  NKVVEALLMYDNDTDKAVAHFLG

A0A6J1K3U0 velvet complex subunit B

1.6e-106

88.79

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Query:  MAYDYRNKPAHYDAHPSMYGPTASSSPSPSLHPMYAQSMYPRIGQQAPSPAPPVARLSSHHHSSS--PSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQI
        MAYDYRNKP +Y+AHP MYGP ASSSPSPS+HPMY QSMYPRIGQQ  SPAPPV R+SSHHHSSS  PSPS PSSSGLGIRVTIKPEY IT PPQLSPQ+
Subjt:  MAYDYRNKPAHYDAHPSMYGPTASSSPSPSLHPMYAQSMYPRIGQQAPSPAPPVARLSSHHHSSS--PSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQI

Query:  GDVPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS
        GD+PRSNFQFDFEFEKKVLAEAEKE PNWNRFGLEHPPS+PVES+SSMGS GDPVV+KYVASGLSREAVS AVANYGDNPTKVQEFVKGYTLLREMGF S
Subjt:  GDVPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS

Query:  NKVVEALLMYDNDTDKAVAHFLG
        NKVVEALLMYDNDTDKAVAHFLG
Subjt:  NKVVEALLMYDNDTDKAVAHFLG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G53330.1 Ubiquitin-associated/translation elongation factor EF1B protein

4.6e-61

59.47

Show/hide

Query:  MAYDYRNKPAHYDAHPSMYGPTASSSPSPSL-HPMYAQSMYPRIGQQ-APSPA--PPVARLSSHHHSSSPSPSPPSSSGLGIRVTIKPEYLITLPPQLSP
        M YDYRNK         MYGP  S+SPSPS  HPMY    YP+IGQQ  P P    P  R SS  H++SP      SSG+GIRV +KPEY IT PPQL P
Subjt:  MAYDYRNKPAHYDAHPSMYGPTASSSPSPSL-HPMYAQSMYPRIGQQ-APSPA--PPVARLSSHHHSSSPSPSPPSSSGLGIRVTIKPEYLITLPPQLSP

Query:  QIGDVPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVE-STSSMGSIG--DPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLRE
        ++GD+ RS+FQFDF  E+KVLAEAEK+NP+W++FG E+PP+K  E S SS+G +   D VV KY ASGL+REAV+ AVANYGDNPTKVQEF  G+T +RE
Subjt:  QIGDVPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVE-STSSMGSIG--DPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLRE

Query:  MGFSSNKVVEALLMYDNDTDKAVAHFL
        MGF +N V +AL M++NDTDKA+AH L
Subjt:  MGFSSNKVVEALLMYDNDTDKAVAHFL

Sequences

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CDS sequence

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ATGGCGTACGATTACAGAAACAAGCCCGCCCACTACGACGCTCATCCGTCGATGTACGGCCCAACCGCTTCATCCTCCCCATCTCCGTCACTCCATCCCATGTATGCACA
GTCTATGTACCCGAGGATCGGTCAACAAGCTCCTTCACCGGCGCCTCCGGTCGCCAGACTCTCATCCCACCACCATTCTTCTTCCCCTTCTCCCTCTCCTCCCTCCTCTT
CAGGATTGGGCATCAGGGTTACCATTAAACCGGAATATCTGATTACTCTGCCGCCTCAATTGTCGCCACAAATTGGAGATGTTCCTCGGAGCAATTTCCAATTTGATTTT
GAGTTTGAGAAAAAGGTTTTAGCTGAAGCAGAGAAAGAAAATCCGAATTGGAATCGGTTTGGGTTGGAACATCCTCCTTCTAAACCAGTAGAGTCGACTTCTTCAATGGG
TTCTATTGGAGATCCAGTTGTGAGCAAGTATGTTGCATCTGGCTTGAGTCGGGAAGCTGTTTCATTTGCAGTTGCTAATTATGGAGACAATCCCACCAAGGTTCAAGAAT
TTGTGAAAGGCTACACACTCCTACGAGAAATGGGATTCTCATCCAACAAGGTGGTCGAGGCATTACTCATGTATGACAATGACACTGATAAGGCTGTAGCTCATTTTCTT
GGCGAATTAACTAATAGGCTGATGGCAAGTTCAATGGTCAAATTACCATACTTTCCTATTTGGAATTTGGTTTTGATTGATATTTTTGGAGCAATGATAAATGATCCATA
TGTTAGACCAAGTCACCACCTTTAG

mRNA sequence

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Protein sequence

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MAYDYRNKPAHYDAHPSMYGPTASSSPSPSLHPMYAQSMYPRIGQQAPSPAPPVARLSSHHHSSSPSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQIGDVPRSNFQFDF
EFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSSNKVVEALLMYDNDTDKAVAHFL
GELTNRLMASSMVKLPYFPIWNLVLIDIFGAMINDPYVRPSHHL

Lag0030759 (gene) of Sponge gourd (AG-4) v1 genome