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Lag0030783 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0030783
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr11:1334673..1335008
RNA-Seq ExpressionLag0030783
SyntenyLag0030783
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056469.1 uncharacterized protein E6C27_scaffold186G002430 [Cucumis melo var. makuwa]3.5e-0440.54Show/hide
Query:  IQRRMPWMSLSPSCCCLCLKDQESQIHLFSICPFASAFWDYLQQAFGWSFARPSDILTLLKSSLIGHPFKKEKK
        +QR+ P  SLS S CCLCLK++E+  HLF  C  AS  W+     FG     P  I   +   L G  F  E+K
Subjt:  IQRRMPWMSLSPSCCCLCLKDQESQIHLFSICPFASAFWDYLQQAFGWSFARPSDILTLLKSSLIGHPFKKEKK

TrEMBL top hitse value%identityAlignment
A0A5A7TTK1 LINE-1 retrotransposable element ORF2 protein6.4e-0440.26Show/hide
Query:  VIQRRMPWMSLSPSCCCLCLKDQESQIHLFSICPFASAFWDYLQQAFGWSFARPSDILTLLKSSLIGHPFKKEKKLL
        V+Q RMP + L PS C LC KD ES  HLF  C      W +LQ AF  S A  +D L  +      H F   +K++
Subjt:  VIQRRMPWMSLSPSCCCLCLKDQESQIHLFSICPFASAFWDYLQQAFGWSFARPSDILTLLKSSLIGHPFKKEKKLL

A0A5D3E019 zf-RVT domain-containing protein1.7e-0440.54Show/hide
Query:  IQRRMPWMSLSPSCCCLCLKDQESQIHLFSICPFASAFWDYLQQAFGWSFARPSDILTLLKSSLIGHPFKKEKK
        +QR+ P  SLS S CCLCLK++E+  HLF  C  AS  W+     FG     P  I   +   L G  F  E+K
Subjt:  IQRRMPWMSLSPSCCCLCLKDQESQIHLFSICPFASAFWDYLQQAFGWSFARPSDILTLLKSSLIGHPFKKEKK

A0A803P465 Uncharacterized protein6.4e-0437.33Show/hide
Query:  IQRRMPWMSLSPSCCCLCLKDQESQIHLFSICPFASAFWDYLQQAFGWSFARPSDILTLLKSSLIGHPFKKEKKL
        +Q+R P++ +SP  C  C    ES  HLF  C F    W Y+   FG S+  P  +  L+ S LIG   K++ KL
Subjt:  IQRRMPWMSLSPSCCCLCLKDQESQIHLFSICPFASAFWDYLQQAFGWSFARPSDILTLLKSSLIGHPFKKEKKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGGCACTATGCCGAAAAAGGTAAAGTTCTTCATGTGGGAGCTCATGTTATTCAACGAAGAATGCCCTGGATGTCCCTTTCTCCAAGTTGCTGTTGTTTATGTCT
CAAAGATCAAGAGTCTCAAATTCATCTCTTTAGCATTTGCCCATTTGCGTCTGCTTTTTGGGATTATCTTCAACAAGCTTTTGGGTGGAGCTTTGCTAGACCGAGTGATA
TCCTTACCCTCCTTAAATCCTCTCTTATTGGGCATCCTTTCAAAAAGGAGAAGAAGCTCTTATGCTTTTTTTTGGAACATTTGGTTGGAGCGGAACGCCAGAATATTCAC
CGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGGCACTATGCCGAAAAAGGTAAAGTTCTTCATGTGGGAGCTCATGTTATTCAACGAAGAATGCCCTGGATGTCCCTTTCTCCAAGTTGCTGTTGTTTATGTCT
CAAAGATCAAGAGTCTCAAATTCATCTCTTTAGCATTTGCCCATTTGCGTCTGCTTTTTGGGATTATCTTCAACAAGCTTTTGGGTGGAGCTTTGCTAGACCGAGTGATA
TCCTTACCCTCCTTAAATCCTCTCTTATTGGGCATCCTTTCAAAAAGGAGAAGAAGCTCTTATGCTTTTTTTTGGAACATTTGGTTGGAGCGGAACGCCAGAATATTCAC
CGATAA
Protein sequenceShow/hide protein sequence
MEGHYAEKGKVLHVGAHVIQRRMPWMSLSPSCCCLCLKDQESQIHLFSICPFASAFWDYLQQAFGWSFARPSDILTLLKSSLIGHPFKKEKKLLCFFLEHLVGAERQNIH
R