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Lag0030785 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0030785
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSuccinate dehydrogenase assembly factor 4, mitochondrial
Genome locationchr11:1354236..1354574
RNA-Seq ExpressionLag0030785
SyntenyLag0030785
Gene Ontology termsGO:0034553 - mitochondrial respiratory chain complex II assembly (biological process)
GO:0005739 - mitochondrion (cellular component)
InterPro domainsIPR012875 - Succinate dehydrogenase assembly factor 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605777.1 Succinate dehydrogenase assembly factor 4, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]8.6e-3575.89Show/hide
Query:  MSSNLRRLFSSPPPSISALPTVSRVASVSLSRLLSSSANQQPSRSERGVASEEQREAGNEISPNQQEAAGEDRDGEDEGADVNEATGEVGGPKGPEPTRY
        MSSNL RLFS  PPS++AL  V+R  S+S+SRL+SSSANQQPSR E+GV  +EQREAG    P+Q EAAG+DRD EDEGADVN+ATGEVGGPKGPEPTRY
Subjt:  MSSNLRRLFSSPPPSISALPTVSRVASVSLSRLLSSSANQQPSRSERGVASEEQREAGNEISPNQQEAAGEDRDGEDEGADVNEATGEVGGPKGPEPTRY

Query:  GDWERNGRCYDF
        GDWERNGRCYDF
Subjt:  GDWERNGRCYDF

KGN49871.1 hypothetical protein Csa_000062 [Cucumis sativus]2.0e-3171.43Show/hide
Query:  MSSNLRRLFSSPPPSISALPTVSRVASVSLSRLLSSSANQQPSRSERGVASEEQREAGNEISPNQQEAAGEDRDGEDEGADVNEATGEVGGPKGPEPTRY
        MSSNL RLFSS PP++SALP VSR+   SLSR +SSS+NQQPSR E+GV+SEEQREAG   SPN+ EAAG+DR G+DEG D  + T E+GGPKGPEPTRY
Subjt:  MSSNLRRLFSSPPPSISALPTVSRVASVSLSRLLSSSANQQPSRSERGVASEEQREAGNEISPNQQEAAGEDRDGEDEGADVNEATGEVGGPKGPEPTRY

Query:  GDWERNGRCYDF
        GDWER GRC DF
Subjt:  GDWERNGRCYDF

XP_022957978.1 succinate dehydrogenase assembly factor 4, mitochondrial [Cucurbita moschata]3.9e-3576.79Show/hide
Query:  MSSNLRRLFSSPPPSISALPTVSRVASVSLSRLLSSSANQQPSRSERGVASEEQREAGNEISPNQQEAAGEDRDGEDEGADVNEATGEVGGPKGPEPTRY
        MSSNL RLFS  PPS++AL  V+R  S+S+SRL+SSSANQQPSR E+GV  EEQREAG    P+Q EAAG+DRD EDEGADVN+ATGEVGGPKGPEPTRY
Subjt:  MSSNLRRLFSSPPPSISALPTVSRVASVSLSRLLSSSANQQPSRSERGVASEEQREAGNEISPNQQEAAGEDRDGEDEGADVNEATGEVGGPKGPEPTRY

Query:  GDWERNGRCYDF
        GDWERNGRCYDF
Subjt:  GDWERNGRCYDF

XP_022995844.1 succinate dehydrogenase assembly factor 4, mitochondrial [Cucurbita maxima]3.0e-3577.68Show/hide
Query:  MSSNLRRLFSSPPPSISALPTVSRVASVSLSRLLSSSANQQPSRSERGVASEEQREAGNEISPNQQEAAGEDRDGEDEGADVNEATGEVGGPKGPEPTRY
        MSSNL RLFS  PPS++AL  V+RV S S+SRL+SSSANQQPSR E+GV  EEQREAG    P+Q EAAG+DRD EDEGADVN+ATGEVGGPKGPEPTRY
Subjt:  MSSNLRRLFSSPPPSISALPTVSRVASVSLSRLLSSSANQQPSRSERGVASEEQREAGNEISPNQQEAAGEDRDGEDEGADVNEATGEVGGPKGPEPTRY

Query:  GDWERNGRCYDF
        GDWERNGRCYDF
Subjt:  GDWERNGRCYDF

XP_023532848.1 succinate dehydrogenase assembly factor 4, mitochondrial [Cucurbita pepo subsp. pepo]8.6e-3575.89Show/hide
Query:  MSSNLRRLFSSPPPSISALPTVSRVASVSLSRLLSSSANQQPSRSERGVASEEQREAGNEISPNQQEAAGEDRDGEDEGADVNEATGEVGGPKGPEPTRY
        MSSNL RLFS  PPS+++L  V+R  S+S+SRL+SSSANQQPSR E+GV  EEQREAG    P+Q EAAG+DRD EDEGADVN+ATGEVGGPKGPEPTRY
Subjt:  MSSNLRRLFSSPPPSISALPTVSRVASVSLSRLLSSSANQQPSRSERGVASEEQREAGNEISPNQQEAAGEDRDGEDEGADVNEATGEVGGPKGPEPTRY

Query:  GDWERNGRCYDF
        GDWERNGRCYDF
Subjt:  GDWERNGRCYDF

TrEMBL top hitse value%identityAlignment
A0A0A0KQ66 Succinate dehydrogenase assembly factor 4, mitochondrial9.6e-3271.43Show/hide
Query:  MSSNLRRLFSSPPPSISALPTVSRVASVSLSRLLSSSANQQPSRSERGVASEEQREAGNEISPNQQEAAGEDRDGEDEGADVNEATGEVGGPKGPEPTRY
        MSSNL RLFSS PP++SALP VSR+   SLSR +SSS+NQQPSR E+GV+SEEQREAG   SPN+ EAAG+DR G+DEG D  + T E+GGPKGPEPTRY
Subjt:  MSSNLRRLFSSPPPSISALPTVSRVASVSLSRLLSSSANQQPSRSERGVASEEQREAGNEISPNQQEAAGEDRDGEDEGADVNEATGEVGGPKGPEPTRY

Query:  GDWERNGRCYDF
        GDWER GRC DF
Subjt:  GDWERNGRCYDF

A0A5A7TMD3 Succinate dehydrogenase assembly factor 4, mitochondrial3.7e-3170.54Show/hide
Query:  MSSNLRRLFSSPPPSISALPTVSRVASVSLSRLLSSSANQQPSRSERGVASEEQREAGNEISPNQQEAAGEDRDGEDEGADVNEATGEVGGPKGPEPTRY
        MSS+L RLFSS PP++SALPTV R+ S SLSR +SSS+NQQPSRSE+GV+SEEQREA    SPNQ EAAG+DR  +D+G D  +   E+GGPKG EPTRY
Subjt:  MSSNLRRLFSSPPPSISALPTVSRVASVSLSRLLSSSANQQPSRSERGVASEEQREAGNEISPNQQEAAGEDRDGEDEGADVNEATGEVGGPKGPEPTRY

Query:  GDWERNGRCYDF
        GDWERNGRCYDF
Subjt:  GDWERNGRCYDF

A0A6J1H1T7 Succinate dehydrogenase assembly factor 4, mitochondrial1.9e-3576.79Show/hide
Query:  MSSNLRRLFSSPPPSISALPTVSRVASVSLSRLLSSSANQQPSRSERGVASEEQREAGNEISPNQQEAAGEDRDGEDEGADVNEATGEVGGPKGPEPTRY
        MSSNL RLFS  PPS++AL  V+R  S+S+SRL+SSSANQQPSR E+GV  EEQREAG    P+Q EAAG+DRD EDEGADVN+ATGEVGGPKGPEPTRY
Subjt:  MSSNLRRLFSSPPPSISALPTVSRVASVSLSRLLSSSANQQPSRSERGVASEEQREAGNEISPNQQEAAGEDRDGEDEGADVNEATGEVGGPKGPEPTRY

Query:  GDWERNGRCYDF
        GDWERNGRCYDF
Subjt:  GDWERNGRCYDF

A0A6J1K722 Succinate dehydrogenase assembly factor 4, mitochondrial1.4e-3577.68Show/hide
Query:  MSSNLRRLFSSPPPSISALPTVSRVASVSLSRLLSSSANQQPSRSERGVASEEQREAGNEISPNQQEAAGEDRDGEDEGADVNEATGEVGGPKGPEPTRY
        MSSNL RLFS  PPS++AL  V+RV S S+SRL+SSSANQQPSR E+GV  EEQREAG    P+Q EAAG+DRD EDEGADVN+ATGEVGGPKGPEPTRY
Subjt:  MSSNLRRLFSSPPPSISALPTVSRVASVSLSRLLSSSANQQPSRSERGVASEEQREAGNEISPNQQEAAGEDRDGEDEGADVNEATGEVGGPKGPEPTRY

Query:  GDWERNGRCYDF
        GDWERNGRCYDF
Subjt:  GDWERNGRCYDF

W9RP47 Succinate dehydrogenase assembly factor 4, mitochondrial1.8e-1452.5Show/hide
Query:  MSSNLRRLFSS------PPPSISALPT--VSRVASVSLSRLLSSSANQQPSRSERGVASEEQREAGNEISPNQQEAAGEDRDGEDEGADVNEATGEVGGP
        M+SNL RLFSS      P   +S+  +  ++R A+ S SRL+SSSA Q+P   +  + ++EQREA  +   N++E   ED   E+EG  +NE TGEVGGP
Subjt:  MSSNLRRLFSS------PPPSISALPT--VSRVASVSLSRLLSSSANQQPSRSERGVASEEQREAGNEISPNQQEAAGEDRDGEDEGADVNEATGEVGGP

Query:  KGPEPTRYGDWERNGRCYDF
        +GPEPTRYGDWERNGRCYDF
Subjt:  KGPEPTRYGDWERNGRCYDF

SwissProt top hitse value%identityAlignment
Q5VUM1 Succinate dehydrogenase assembly factor 4, mitochondrial2.5e-0878.12Show/hide
Query:  DVNEATGEVGGPKGPEPTRYGDWERNGRCYDF
        DVN  T E GGP+GPEPTRYGDWER GRC DF
Subjt:  DVNEATGEVGGPKGPEPTRYGDWERNGRCYDF

Q8BTE0 Succinate dehydrogenase assembly factor 4, mitochondrial9.3e-0858.49Show/hide
Query:  EISPNQQEAAGEDRDGEDEGADVNEATGEVGGPKGPEPTRYGDWERNGRCYDF
        E SP ++E   +  D      DVN  T E GGPKGPEPTRYGDWER GRC DF
Subjt:  EISPNQQEAAGEDRDGEDEGADVNEATGEVGGPKGPEPTRYGDWERNGRCYDF

Q9VLU6 Succinate dehydrogenase assembly factor 4, mitochondrial7.9e-0776.67Show/hide
Query:  NEATGEVGGPKGPEPTRYGDWERNGRCYDF
        N  TGE+GGP GPEPTRYGDWER GR  DF
Subjt:  NEATGEVGGPKGPEPTRYGDWERNGRCYDF

Arabidopsis top hitse value%identityAlignment
AT5G67490.1 unknown protein3.0e-0943.53Show/hide
Query:  LSRLLSSSANQQPSRSERGVASEEQREAGNEISPNQQEAAGEDRDGEDEGAD--VNEATGEVGGPKGPEPTRYGDWERNGRCYDF
        +SR LSS     P             +    +  N Q    E+ +GE  G    VNE TGE+GGP+GPEPTRYGDWE+ GRC DF
Subjt:  LSRLLSSSANQQPSRSERGVASEEQREAGNEISPNQQEAAGEDRDGEDEGAD--VNEATGEVGGPKGPEPTRYGDWERNGRCYDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAGCAATCTCCGCCGTCTATTCTCGTCGCCGCCGCCGAGCATCTCCGCCCTACCGACGGTGAGTCGCGTCGCTTCCGTCTCGCTGAGCCGACTCCTCAGCTCCTC
GGCGAATCAACAGCCTTCTCGATCGGAGCGAGGCGTTGCCAGCGAGGAACAACGAGAGGCTGGAAATGAAATTTCGCCGAATCAACAAGAGGCTGCTGGAGAGGATCGAG
ACGGTGAAGATGAAGGAGCTGATGTGAATGAAGCGACCGGTGAGGTCGGTGGACCTAAAGGCCCCGAGCCCACCCGCTACGGCGATTGGGAACGAAACGGTCGGTGCTAC
GATTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAGCAATCTCCGCCGTCTATTCTCGTCGCCGCCGCCGAGCATCTCCGCCCTACCGACGGTGAGTCGCGTCGCTTCCGTCTCGCTGAGCCGACTCCTCAGCTCCTC
GGCGAATCAACAGCCTTCTCGATCGGAGCGAGGCGTTGCCAGCGAGGAACAACGAGAGGCTGGAAATGAAATTTCGCCGAATCAACAAGAGGCTGCTGGAGAGGATCGAG
ACGGTGAAGATGAAGGAGCTGATGTGAATGAAGCGACCGGTGAGGTCGGTGGACCTAAAGGCCCCGAGCCCACCCGCTACGGCGATTGGGAACGAAACGGTCGGTGCTAC
GATTTTTGA
Protein sequenceShow/hide protein sequence
MSSNLRRLFSSPPPSISALPTVSRVASVSLSRLLSSSANQQPSRSERGVASEEQREAGNEISPNQQEAAGEDRDGEDEGADVNEATGEVGGPKGPEPTRYGDWERNGRCY
DF