CuGenDBv2

Gene ID	Lag0030823
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	E3 ubiquitin-protein ligase rnf8-A isoform X2
Genome location	chr11:1741744..1751307
RNA-Seq Expression	Lag0030823
Synteny	Lag0030823
Gene Ontology terms	GO:0043231 - intracellular membrane-bounded organelle (cellular component) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR001841 - Zinc finger, RING-type IPR011011 - Zinc finger, FYVE/PHD-type IPR013083 - Zinc finger, RING/FYVE/PHD-type IPR017907 - Zinc finger, RING-type, conserved site IPR026960 - Reverse transcriptase zinc-binding domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_011651366.1 uncharacterized protein LOC101213123 [Cucumis sativus]

4.8e-181

79.9

Show/hide

Query:  GQSAGPLSMKLPLAVKGSVSTKKYIVLSEKLHNCDNVEDQSIENICSFGDSILPHSCLLDEDLYSDFRKSDDTASKPKHKLRKEVSKQDDPSSSSCRNHF
        GQS GPLSMKLPLA KG VS KKY +LSEKLHN  NVEDQSI++ICSFGDSILP S LLD+DL SDFRKSDDTA K KHK+RK +SK +DPSSSS RN F
Subjt:  GQSAGPLSMKLPLAVKGSVSTKKYIVLSEKLHNCDNVEDQSIENICSFGDSILPHSCLLDEDLYSDFRKSDDTASKPKHKLRKEVSKQDDPSSSSCRNHF

Query:  EEATPSGFFAIERGSSSSLARDERKGENSIQNPAVKSSRRRR-LVNKNSSEDPNEPNAWNFDPECYHLGTSNHGNSLRVSSSHLDDEADIEVVNIGGTSD
        EE T +G FAIE GS SSLARDERKGE+S Q+  VKSSRRRR LV+ NS ED N+P+  NFDPE Y LGT    NSL V S   D E DIEVVNIGGTSD
Subjt:  EEATPSGFFAIERGSSSSLARDERKGENSIQNPAVKSSRRRR-LVNKNSSEDPNEPNAWNFDPECYHLGTSNHGNSLRVSSSHLDDEADIEVVNIGGTSD

Query:  REQLCDERGLASNSYEGVEACENLSTSRDTNLPVGNEPRVLTITSEDELHDISDLQKNIEDPVIEVNACLPSNSTELSCVICWTDFSSTRGVLPCGHRFC
        REQLCDERGLAS  +EGVEACEN STS+DTNL V N PRVL+ITSEDELH+++DLQKNIEDPVIE++A LPS STELSCVICWTDFSSTRGVLPCGHRFC
Subjt:  REQLCDERGLASNSYEGVEACENLSTSRDTNLPVGNEPRVLTITSEDELHDISDLQKNIEDPVIEVNACLPSNSTELSCVICWTDFSSTRGVLPCGHRFC

Query:  YSCIQNWADHMASSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERTFNSSVQPSVATVCSSCRCREPEDLLVSCHLCQIRH
        YSCIQNWADHMA SRKISTCPLCKASFLSITKVE AATSDQKIYSQTIPCG SLLDIY+L DERT N+ VQPSVA VCS+CRCREPEDLL+SCHLCQIR 
Subjt:  YSCIQNWADHMASSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERTFNSSVQPSVATVCSSCRCREPEDLLVSCHLCQIRH

Query:  IHSYCLDPPLLPWTCIHC
        IHSYCLDPPLLPWTCIHC
Subjt:  IHSYCLDPPLLPWTCIHC

XP_022935568.1 uncharacterized protein LOC111442404 [Cucurbita moschata]

8.2e-181

78.23

Show/hide

Query:  GQSAGPLSMKLPLAVKGSVSTKKYIVLSEKLHNCDNVEDQSIENICSFGDSILPHSCLLDEDLYSDFRKSDDTASKPKHKLRKEVSKQDDPSSSSCRNHF
        GQSAGPLSMKLP + +GSVSTKKY V SEKLHNC N+EDQ I+ +CSFGDSILPHS LLD+++Y DFR SDDTA K KHKLRK +SK ++PSSSS +NHF
Subjt:  GQSAGPLSMKLPLAVKGSVSTKKYIVLSEKLHNCDNVEDQSIENICSFGDSILPHSCLLDEDLYSDFRKSDDTASKPKHKLRKEVSKQDDPSSSSCRNHF

Query:  EEATPSGFFAIERGSSSSLARDERKGENSIQNPAVKSSRR-RRLVNKNSSEDPNEPNAWNFDPECYHLGTSNHGNSLRVSSSHLDDEADIEVVNIGGTSD
        +E TPS FFAI  GSSSSLARDE KG+   +N  V+SSRR RRLV KNSSED NEP+ WNFDPE YHL      NS  V SSH DDE DIE VNIGGT+D
Subjt:  EEATPSGFFAIERGSSSSLARDERKGENSIQNPAVKSSRR-RRLVNKNSSEDPNEPNAWNFDPECYHLGTSNHGNSLRVSSSHLDDEADIEVVNIGGTSD

Query:  REQLCDERGLASNSYEGVEACENLSTSRDTNLPVGNEPRVLTITSEDELHDISDLQKNIEDPVIEVNACLPSNSTELSCVICWTDFSSTRGVLPCGHRFC
         +QLCDERGLAS+S+EGVEAC N STSR TNL V N PR+LT TSEDELH  + LQKNIED VIE+N  +PS STELSCVICWTDFSSTRGVLPCGHRFC
Subjt:  REQLCDERGLASNSYEGVEACENLSTSRDTNLPVGNEPRVLTITSEDELHDISDLQKNIEDPVIEVNACLPSNSTELSCVICWTDFSSTRGVLPCGHRFC

Query:  YSCIQNWADHMASSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERTFNSSVQPSVATVCSSCRCREPEDLLVSCHLCQIRH
        YSCIQNWADHMAS RKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCG SLLDIYILPDERT +S VQPSVA VCS CRCREPEDLL+SCHLCQIRH
Subjt:  YSCIQNWADHMASSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERTFNSSVQPSVATVCSSCRCREPEDLLVSCHLCQIRH

Query:  IHSYCLDPPLLPWTCIHC
        IHSYCLDPPLLPW CIHC
Subjt:  IHSYCLDPPLLPWTCIHC

XP_022983591.1 E3 ubiquitin-protein ligase rnf8-A isoform X1 [Cucurbita maxima]

1.1e-185

79.43

Show/hide

Query:  GQSAGPLSMKLPLAVKGSVSTKKYIVLSEKLHNCDNVEDQSIENICSFGDSILPHSCLLDEDLYSDFRKSDDTASKPKHKLRKEVSKQDDPSSSSCRNHF
        GQSAGPLSMKLP + KGSVSTKKY V SEKLHNC NVEDQ I+ +CSFGDSILPHS LLD+++Y DFR SDDTA K KHKLRK +SK ++PSSSS +NHF
Subjt:  GQSAGPLSMKLPLAVKGSVSTKKYIVLSEKLHNCDNVEDQSIENICSFGDSILPHSCLLDEDLYSDFRKSDDTASKPKHKLRKEVSKQDDPSSSSCRNHF

Query:  EEATPSGFFAIERGSSSSLARDERKGENSIQNPAVKSSRR-RRLVNKNSSEDPNEPNAWNFDPECYHLGTSNHGNSLRVSSSHLDDEADIEVVNIGGTSD
        +E TPS FFAI  GSSSSLARDE KG+   +N  V+SSRR RRLV KNSSED N+P+ WNFDPE YHL T    NSL V SSH DDE D EVVN+GGT+D
Subjt:  EEATPSGFFAIERGSSSSLARDERKGENSIQNPAVKSSRR-RRLVNKNSSEDPNEPNAWNFDPECYHLGTSNHGNSLRVSSSHLDDEADIEVVNIGGTSD

Query:  REQLCDERGLASNSYEGVEACENLSTSRDTNLPVGNEPRVLTITSEDELHDISDLQKNIEDPVIEVNACLPSNSTELSCVICWTDFSSTRGVLPCGHRFC
        R+QLCDERGLAS+S+EGVEACEN STSR TNL V N PR+LT+TSEDELH   DLQK IEDPVIE+N  +PS +TELSCVICWTDFSSTRGVLPCGHRFC
Subjt:  REQLCDERGLASNSYEGVEACENLSTSRDTNLPVGNEPRVLTITSEDELHDISDLQKNIEDPVIEVNACLPSNSTELSCVICWTDFSSTRGVLPCGHRFC

Query:  YSCIQNWADHMASSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERTFNSSVQPSVATVCSSCRCREPEDLLVSCHLCQIRH
        YSCIQNWADHMASSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERT +S VQPSVA VCS CRC+EPEDLL+SCHLCQIRH
Subjt:  YSCIQNWADHMASSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERTFNSSVQPSVATVCSSCRCREPEDLLVSCHLCQIRH

Query:  IHSYCLDPPLLPWTCIHC
        IHSYCLDPPLLPW CIHC
Subjt:  IHSYCLDPPLLPWTCIHC

XP_022983593.1 E3 ubiquitin-protein ligase rnf8-A isoform X2 [Cucurbita maxima]

1.1e-185

79.43

Show/hide

Query:  GQSAGPLSMKLPLAVKGSVSTKKYIVLSEKLHNCDNVEDQSIENICSFGDSILPHSCLLDEDLYSDFRKSDDTASKPKHKLRKEVSKQDDPSSSSCRNHF
        GQSAGPLSMKLP + KGSVSTKKY V SEKLHNC NVEDQ I+ +CSFGDSILPHS LLD+++Y DFR SDDTA K KHKLRK +SK ++PSSSS +NHF
Subjt:  GQSAGPLSMKLPLAVKGSVSTKKYIVLSEKLHNCDNVEDQSIENICSFGDSILPHSCLLDEDLYSDFRKSDDTASKPKHKLRKEVSKQDDPSSSSCRNHF

Query:  EEATPSGFFAIERGSSSSLARDERKGENSIQNPAVKSSRR-RRLVNKNSSEDPNEPNAWNFDPECYHLGTSNHGNSLRVSSSHLDDEADIEVVNIGGTSD
        +E TPS FFAI  GSSSSLARDE KG+   +N  V+SSRR RRLV KNSSED N+P+ WNFDPE YHL T    NSL V SSH DDE D EVVN+GGT+D
Subjt:  EEATPSGFFAIERGSSSSLARDERKGENSIQNPAVKSSRR-RRLVNKNSSEDPNEPNAWNFDPECYHLGTSNHGNSLRVSSSHLDDEADIEVVNIGGTSD

Query:  REQLCDERGLASNSYEGVEACENLSTSRDTNLPVGNEPRVLTITSEDELHDISDLQKNIEDPVIEVNACLPSNSTELSCVICWTDFSSTRGVLPCGHRFC
        R+QLCDERGLAS+S+EGVEACEN STSR TNL V N PR+LT+TSEDELH   DLQK IEDPVIE+N  +PS +TELSCVICWTDFSSTRGVLPCGHRFC
Subjt:  REQLCDERGLASNSYEGVEACENLSTSRDTNLPVGNEPRVLTITSEDELHDISDLQKNIEDPVIEVNACLPSNSTELSCVICWTDFSSTRGVLPCGHRFC

Query:  YSCIQNWADHMASSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERTFNSSVQPSVATVCSSCRCREPEDLLVSCHLCQIRH
        YSCIQNWADHMASSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERT +S VQPSVA VCS CRC+EPEDLL+SCHLCQIRH
Subjt:  YSCIQNWADHMASSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERTFNSSVQPSVATVCSSCRCREPEDLLVSCHLCQIRH

Query:  IHSYCLDPPLLPWTCIHC
        IHSYCLDPPLLPW CIHC
Subjt:  IHSYCLDPPLLPWTCIHC

XP_038887153.1 uncharacterized protein LOC120077302 [Benincasa hispida]

4.6e-184

80.14

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Query:  GQSAGPLSMKLPLAVKGSVSTKKYIVLSEKLHNCDNVEDQSIENICSFGDSILPHSCLLDEDLYSDFRKSDDTASKPKHKLRKEVSKQDDPSSSSCRNHF
        GQ AGPLSMKLPLA KGSVSTKK  +L EKLHN  NV+DQSI++ICSF DSILPHS LLD+DLYSDFR SD TA K K  LR+ +SKQ+D SSSS RNHF
Subjt:  GQSAGPLSMKLPLAVKGSVSTKKYIVLSEKLHNCDNVEDQSIENICSFGDSILPHSCLLDEDLYSDFRKSDDTASKPKHKLRKEVSKQDDPSSSSCRNHF

Query:  EEATPSGFFAIERGSSSSLARDERKGENSIQNPAVKSSRR-RRLVNKNSSEDPNEPNAWNFDPECYHLGTSNHGNSLRVSSSHLDDEADIEVVNIGGTSD
        EE TPSGFFAIERGSSS LARDERKGE+S Q+  V SSRR RRLVNKNS+ED N+ + WNFD    HLGT    NSL   SSH DDE +IEVVNIGGTSD
Subjt:  EEATPSGFFAIERGSSSSLARDERKGENSIQNPAVKSSRR-RRLVNKNSSEDPNEPNAWNFDPECYHLGTSNHGNSLRVSSSHLDDEADIEVVNIGGTSD

Query:  REQLCDERGLASNSYEGVEACENLSTSRDTNLPVGNEPRVLTITSEDELHDISDLQKNIEDPVIEVNACLPSNSTELSCVICWTDFSSTRGVLPCGHRFC
        R+QL DERGL+S+S+EG+EACE+ STSRDTNL V N PR  +ITSEDELH+I++LQKNIEDPVIE+NA LPS STELSCVICWTDFSSTRGVLPCGHRFC
Subjt:  REQLCDERGLASNSYEGVEACENLSTSRDTNLPVGNEPRVLTITSEDELHDISDLQKNIEDPVIEVNACLPSNSTELSCVICWTDFSSTRGVLPCGHRFC

Query:  YSCIQNWADHMASSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERTFNSSVQPSVATVCSSCRCREPEDLLVSCHLCQIRH
        YSCIQNWADHMA SRKISTCPLCKA+FLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERT N+ VQPSVA VCS+CRCREPEDLL+SCHLCQIRH
Subjt:  YSCIQNWADHMASSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERTFNSSVQPSVATVCSSCRCREPEDLLVSCHLCQIRH

Query:  IHSYCLDPPLLPWTCIHC
        IHSYCLDPPLLPWTCIHC
Subjt:  IHSYCLDPPLLPWTCIHC

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L7F3 Uncharacterized protein

2.3e-181

79.9

Show/hide

Query:  GQSAGPLSMKLPLAVKGSVSTKKYIVLSEKLHNCDNVEDQSIENICSFGDSILPHSCLLDEDLYSDFRKSDDTASKPKHKLRKEVSKQDDPSSSSCRNHF
        GQS GPLSMKLPLA KG VS KKY +LSEKLHN  NVEDQSI++ICSFGDSILP S LLD+DL SDFRKSDDTA K KHK+RK +SK +DPSSSS RN F
Subjt:  GQSAGPLSMKLPLAVKGSVSTKKYIVLSEKLHNCDNVEDQSIENICSFGDSILPHSCLLDEDLYSDFRKSDDTASKPKHKLRKEVSKQDDPSSSSCRNHF

Query:  EEATPSGFFAIERGSSSSLARDERKGENSIQNPAVKSSRRRR-LVNKNSSEDPNEPNAWNFDPECYHLGTSNHGNSLRVSSSHLDDEADIEVVNIGGTSD
        EE T +G FAIE GS SSLARDERKGE+S Q+  VKSSRRRR LV+ NS ED N+P+  NFDPE Y LGT    NSL V S   D E DIEVVNIGGTSD
Subjt:  EEATPSGFFAIERGSSSSLARDERKGENSIQNPAVKSSRRRR-LVNKNSSEDPNEPNAWNFDPECYHLGTSNHGNSLRVSSSHLDDEADIEVVNIGGTSD

Query:  REQLCDERGLASNSYEGVEACENLSTSRDTNLPVGNEPRVLTITSEDELHDISDLQKNIEDPVIEVNACLPSNSTELSCVICWTDFSSTRGVLPCGHRFC
        REQLCDERGLAS  +EGVEACEN STS+DTNL V N PRVL+ITSEDELH+++DLQKNIEDPVIE++A LPS STELSCVICWTDFSSTRGVLPCGHRFC
Subjt:  REQLCDERGLASNSYEGVEACENLSTSRDTNLPVGNEPRVLTITSEDELHDISDLQKNIEDPVIEVNACLPSNSTELSCVICWTDFSSTRGVLPCGHRFC

Query:  YSCIQNWADHMASSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERTFNSSVQPSVATVCSSCRCREPEDLLVSCHLCQIRH
        YSCIQNWADHMA SRKISTCPLCKASFLSITKVE AATSDQKIYSQTIPCG SLLDIY+L DERT N+ VQPSVA VCS+CRCREPEDLL+SCHLCQIR 
Subjt:  YSCIQNWADHMASSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERTFNSSVQPSVATVCSSCRCREPEDLLVSCHLCQIRH

Query:  IHSYCLDPPLLPWTCIHC
        IHSYCLDPPLLPWTCIHC
Subjt:  IHSYCLDPPLLPWTCIHC

A0A6J1D4V1 uncharacterized protein LOC111016967 isoform X1

1.1e-178

76.5

Show/hide

Query:  GQSAGPLSMKLPLAVKGSVSTKKYIVLSEKLHNCDNVEDQSIENICSFGDSILPHSCLLDEDLYSDFRKSDDTASKPKHKLRKEVSKQDDPSSSSCRNHF
        GQSAGPLS++LPLA K SVST KY VLSEK  NC NVE+QSI++I SFG +I P SCLLD+DL+SDF KSDDT+ K KHKLRK++SKQ+DPS+SS RN+F
Subjt:  GQSAGPLSMKLPLAVKGSVSTKKYIVLSEKLHNCDNVEDQSIENICSFGDSILPHSCLLDEDLYSDFRKSDDTASKPKHKLRKEVSKQDDPSSSSCRNHF

Query:  EEATPSGFFAIERGSSSSLARDERKGENSIQNPAVKSSRRRRLVNKNSSEDPNEPNAWNFDPECYHLGTSNHGNSLRVSSSHLDDEADIEVVNIGGTSDR
        +E TPS F  IERGSSSSLARDERKGENS  +P VKSSRRRRL+N+N+SED  +P+ W+FDPECYHLGT NHGN+  V S HL++E DIEVV IGG+SD 
Subjt:  EEATPSGFFAIERGSSSSLARDERKGENSIQNPAVKSSRRRRLVNKNSSEDPNEPNAWNFDPECYHLGTSNHGNSLRVSSSHLDDEADIEVVNIGGTSDR

Query:  EQLCDERGLASNSYEGVEACENLSTSRDTNLPVGNEPRVLTITSEDELHDISDLQKNIEDPVIEVNACLPSNSTELSCVICWTDFSSTRGVLPCGHRFCY
          LCDE G+ S+S+EGVEA EN  TS+D NLPV N P VL I+SEDEL +I  LQK IEDP +E NA LP+ S ELSCVICWTDFSS RGVLPCGHRFCY
Subjt:  EQLCDERGLASNSYEGVEACENLSTSRDTNLPVGNEPRVLTITSEDELHDISDLQKNIEDPVIEVNACLPSNSTELSCVICWTDFSSTRGVLPCGHRFCY

Query:  SCIQNWADHMASSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERTFNSSVQPSVATVCSSCRCREPEDLLVSCHLCQIRHI
        SCIQNWADHMASSRKISTCPLCKASFLSITKVE+AATSDQKIYSQTIPCGPSLLDI+ILPDERT NS VQ SV  VCS+CRCREPEDLL+SCHLCQIRHI
Subjt:  SCIQNWADHMASSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERTFNSSVQPSVATVCSSCRCREPEDLLVSCHLCQIRHI

Query:  HSYCLDPPLLPWTCIHC
        HSYCLDPPLLPWTCIHC
Subjt:  HSYCLDPPLLPWTCIHC

A0A6J1FAW6 uncharacterized protein LOC111442404

4.0e-181

78.23

Show/hide

Query:  GQSAGPLSMKLPLAVKGSVSTKKYIVLSEKLHNCDNVEDQSIENICSFGDSILPHSCLLDEDLYSDFRKSDDTASKPKHKLRKEVSKQDDPSSSSCRNHF
        GQSAGPLSMKLP + +GSVSTKKY V SEKLHNC N+EDQ I+ +CSFGDSILPHS LLD+++Y DFR SDDTA K KHKLRK +SK ++PSSSS +NHF
Subjt:  GQSAGPLSMKLPLAVKGSVSTKKYIVLSEKLHNCDNVEDQSIENICSFGDSILPHSCLLDEDLYSDFRKSDDTASKPKHKLRKEVSKQDDPSSSSCRNHF

Query:  EEATPSGFFAIERGSSSSLARDERKGENSIQNPAVKSSRR-RRLVNKNSSEDPNEPNAWNFDPECYHLGTSNHGNSLRVSSSHLDDEADIEVVNIGGTSD
        +E TPS FFAI  GSSSSLARDE KG+   +N  V+SSRR RRLV KNSSED NEP+ WNFDPE YHL      NS  V SSH DDE DIE VNIGGT+D
Subjt:  EEATPSGFFAIERGSSSSLARDERKGENSIQNPAVKSSRR-RRLVNKNSSEDPNEPNAWNFDPECYHLGTSNHGNSLRVSSSHLDDEADIEVVNIGGTSD

Query:  REQLCDERGLASNSYEGVEACENLSTSRDTNLPVGNEPRVLTITSEDELHDISDLQKNIEDPVIEVNACLPSNSTELSCVICWTDFSSTRGVLPCGHRFC
         +QLCDERGLAS+S+EGVEAC N STSR TNL V N PR+LT TSEDELH  + LQKNIED VIE+N  +PS STELSCVICWTDFSSTRGVLPCGHRFC
Subjt:  REQLCDERGLASNSYEGVEACENLSTSRDTNLPVGNEPRVLTITSEDELHDISDLQKNIEDPVIEVNACLPSNSTELSCVICWTDFSSTRGVLPCGHRFC

Query:  YSCIQNWADHMASSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERTFNSSVQPSVATVCSSCRCREPEDLLVSCHLCQIRH
        YSCIQNWADHMAS RKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCG SLLDIYILPDERT +S VQPSVA VCS CRCREPEDLL+SCHLCQIRH
Subjt:  YSCIQNWADHMASSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERTFNSSVQPSVATVCSSCRCREPEDLLVSCHLCQIRH

Query:  IHSYCLDPPLLPWTCIHC
        IHSYCLDPPLLPW CIHC
Subjt:  IHSYCLDPPLLPWTCIHC

A0A6J1J2R6 E3 ubiquitin-protein ligase rnf8-A isoform X1

5.3e-186

79.43

Show/hide

Query:  GQSAGPLSMKLPLAVKGSVSTKKYIVLSEKLHNCDNVEDQSIENICSFGDSILPHSCLLDEDLYSDFRKSDDTASKPKHKLRKEVSKQDDPSSSSCRNHF
        GQSAGPLSMKLP + KGSVSTKKY V SEKLHNC NVEDQ I+ +CSFGDSILPHS LLD+++Y DFR SDDTA K KHKLRK +SK ++PSSSS +NHF
Subjt:  GQSAGPLSMKLPLAVKGSVSTKKYIVLSEKLHNCDNVEDQSIENICSFGDSILPHSCLLDEDLYSDFRKSDDTASKPKHKLRKEVSKQDDPSSSSCRNHF

Query:  EEATPSGFFAIERGSSSSLARDERKGENSIQNPAVKSSRR-RRLVNKNSSEDPNEPNAWNFDPECYHLGTSNHGNSLRVSSSHLDDEADIEVVNIGGTSD
        +E TPS FFAI  GSSSSLARDE KG+   +N  V+SSRR RRLV KNSSED N+P+ WNFDPE YHL T    NSL V SSH DDE D EVVN+GGT+D
Subjt:  EEATPSGFFAIERGSSSSLARDERKGENSIQNPAVKSSRR-RRLVNKNSSEDPNEPNAWNFDPECYHLGTSNHGNSLRVSSSHLDDEADIEVVNIGGTSD

Query:  REQLCDERGLASNSYEGVEACENLSTSRDTNLPVGNEPRVLTITSEDELHDISDLQKNIEDPVIEVNACLPSNSTELSCVICWTDFSSTRGVLPCGHRFC
        R+QLCDERGLAS+S+EGVEACEN STSR TNL V N PR+LT+TSEDELH   DLQK IEDPVIE+N  +PS +TELSCVICWTDFSSTRGVLPCGHRFC
Subjt:  REQLCDERGLASNSYEGVEACENLSTSRDTNLPVGNEPRVLTITSEDELHDISDLQKNIEDPVIEVNACLPSNSTELSCVICWTDFSSTRGVLPCGHRFC

Query:  YSCIQNWADHMASSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERTFNSSVQPSVATVCSSCRCREPEDLLVSCHLCQIRH
        YSCIQNWADHMASSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERT +S VQPSVA VCS CRC+EPEDLL+SCHLCQIRH
Subjt:  YSCIQNWADHMASSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERTFNSSVQPSVATVCSSCRCREPEDLLVSCHLCQIRH

Query:  IHSYCLDPPLLPWTCIHC
        IHSYCLDPPLLPW CIHC
Subjt:  IHSYCLDPPLLPWTCIHC

A0A6J1J860 E3 ubiquitin-protein ligase rnf8-A isoform X2

5.3e-186

79.43

Show/hide

Query:  GQSAGPLSMKLPLAVKGSVSTKKYIVLSEKLHNCDNVEDQSIENICSFGDSILPHSCLLDEDLYSDFRKSDDTASKPKHKLRKEVSKQDDPSSSSCRNHF
        GQSAGPLSMKLP + KGSVSTKKY V SEKLHNC NVEDQ I+ +CSFGDSILPHS LLD+++Y DFR SDDTA K KHKLRK +SK ++PSSSS +NHF
Subjt:  GQSAGPLSMKLPLAVKGSVSTKKYIVLSEKLHNCDNVEDQSIENICSFGDSILPHSCLLDEDLYSDFRKSDDTASKPKHKLRKEVSKQDDPSSSSCRNHF

Query:  EEATPSGFFAIERGSSSSLARDERKGENSIQNPAVKSSRR-RRLVNKNSSEDPNEPNAWNFDPECYHLGTSNHGNSLRVSSSHLDDEADIEVVNIGGTSD
        +E TPS FFAI  GSSSSLARDE KG+   +N  V+SSRR RRLV KNSSED N+P+ WNFDPE YHL T    NSL V SSH DDE D EVVN+GGT+D
Subjt:  EEATPSGFFAIERGSSSSLARDERKGENSIQNPAVKSSRR-RRLVNKNSSEDPNEPNAWNFDPECYHLGTSNHGNSLRVSSSHLDDEADIEVVNIGGTSD

Query:  REQLCDERGLASNSYEGVEACENLSTSRDTNLPVGNEPRVLTITSEDELHDISDLQKNIEDPVIEVNACLPSNSTELSCVICWTDFSSTRGVLPCGHRFC
        R+QLCDERGLAS+S+EGVEACEN STSR TNL V N PR+LT+TSEDELH   DLQK IEDPVIE+N  +PS +TELSCVICWTDFSSTRGVLPCGHRFC
Subjt:  REQLCDERGLASNSYEGVEACENLSTSRDTNLPVGNEPRVLTITSEDELHDISDLQKNIEDPVIEVNACLPSNSTELSCVICWTDFSSTRGVLPCGHRFC

Query:  YSCIQNWADHMASSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERTFNSSVQPSVATVCSSCRCREPEDLLVSCHLCQIRH
        YSCIQNWADHMASSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERT +S VQPSVA VCS CRC+EPEDLL+SCHLCQIRH
Subjt:  YSCIQNWADHMASSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERTFNSSVQPSVATVCSSCRCREPEDLLVSCHLCQIRH

Query:  IHSYCLDPPLLPWTCIHC
        IHSYCLDPPLLPW CIHC
Subjt:  IHSYCLDPPLLPWTCIHC

SwissProt top hits

e value

%identity

Alignment

P0C2F6 Putative ribonuclease H protein At1g65750

3.4e-28

28.66

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Query:  MTLIRSVLKDIPIYFLSLFRAPISICNAMEKLMRDFLRERVDEGKGSHLVSWKVISKPMSFGGLEIGNLRTRNRALLAKWLWRFRFESDSLWVRIIVSKH
        +TL ++VL  +P++ +S    P SI N +++L R FL     E K  HLV W  +  P   GGL +   ++ NRAL++K  WR   E +SLW  ++  K+
Subjt:  MTLIRSVLKDIPIYFLSLFRAPISICNAMEKLMRDFLRERVDEGKGSHLVSWKVISKPMSFGGLEIGNLRTRNRALLAKWLWRFRFESDSLWVRIIVSKH

Query:  ---SQHPYMWLSGGVKGTFGNPWKDISLELPS-FSSLVQCIVGDERDICFWEDMWVGDRPLCSLFPRLYHLSSMKNRTVADILGPVGSSTSFSFGFRRSL
                 WL    KG++ + W+ I++ L    S  V  I GD + I FW D WV  +PL  L        +  +  VA  L   G    F+     + 
Subjt:  ---SQHPYMWLSGGVKGTFGNPWKDISLELPS-FSSLVQCIVGDERDICFWEDMWVGDRPLCSLFPRLYHLSSMKNRTVADILGPVGSSTSFSFGFRRSL

Query:  SDRETTDIMALLSLIEGANLRSDRRDVRFWSLDPSAGFSYRSFFRFLV---NPSPVRESVFSCLWKVKALKKVLLFAWQVILGRFNTFDRLSRVKAPVVG
        ++        +L L+ GA      RD   W       FS RS +  L     P P   S F+CLWKV+  ++V  F W  ++G         R +  +  
Subjt:  SDRETTDIMALLSLIEGANLRSDRRDVRFWSLDPSAGFSYRSFFRFLV---NPSPVRESVFSCLWKVKALKKVLLFAWQVILGRFNTFDRLSRVKAPVVG

Query:  PFCYLLCWKTKENLDHLLWNCEFARFVW
             +C    E++ H+L +C     +W
Subjt:  PFCYLLCWKTKENLDHLLWNCEFARFVW

Arabidopsis top hits

e value

%identity

Alignment

AT1G67180.1 zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein

6.5e-51

38.49

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Query:  IERGSSSSLARDERKGENSIQNPAVKSSRRRRLVNKNSSEDPNEPNAWNFDPECYHLGTSNHGNSLRVSSSHLDDEADIEVVNIGGTSDREQLCDERGLA
        +E   +S +A   RKG+  +    VK    R L++  S E+ +           +H  +  + N  +      D+     V   G TS      D   LA
Subjt:  IERGSSSSLARDERKGENSIQNPAVKSSRRRRLVNKNSSEDPNEPNAWNFDPECYHLGTSNHGNSLRVSSSHLDDEADIEVVNIGGTSDREQLCDERGLA

Query:  SNSY--EGVEACENLSTSRDTNLPVGNEPRVLTITSEDELHDISDLQKNIEDPVIEVNACLPSNSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWAD
        + ++  + +E  EN S S     P    P    I  +D+           ++   E          ++SC+ICWT+FSS+RG+LPCGHRFCYSCIQ WAD
Subjt:  SNSY--EGVEACENLSTSRDTNLPVGNEPRVLTITSEDELHDISDLQKNIEDPVIEVNACLPSNSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWAD

Query:  HMASSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDI-YILPDERTFNSSVQP-SVATVCSSCRCREPEDLLVSCHLCQIRHIHSYCLD
         + S RK +TCPLCK++F++ITK+EDA +SDQKIYSQT+P   S  +I  +LP+E     ++ P + A+ CS C   EPE+LL+ CHLC  R IHSYCLD
Subjt:  HMASSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDI-YILPDERTFNSSVQP-SVATVCSSCRCREPEDLLVSCHLCQIRHIHSYCLD

Query:  PPLLPWTCIHCDCKEQM
        P LLPWTC HC+  + M
Subjt:  PPLLPWTCIHCDCKEQM

AT2G02520.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

7.8e-04

32.1

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Query:  VNPSPVRESVFSCLWKVKALKKVLLFAWQVILGRFNTFDRLSRVKAPVVGPFCYLLCWKTKENLDHLLWNCEFARFVWSPF
        +NP   R   F  +W    + K    AW  +  R +T DR+  +    + P   L C    E   HL ++CEFAR VW  F
Subjt:  VNPSPVRESVFSCLWKVKALKKVLLFAWQVILGRFNTFDRLSRVKAPVVGPFCYLLCWKTKENLDHLLWNCEFARFVWSPF

AT4G29090.1 Ribonuclease H-like superfamily protein

1.7e-19

22.55

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Query:  IPIYFLSLFRAPISICNAMEKLMRDFLRERVDEGKGSHLVSWKVISKPMSFGGLEIGNLRTRNRALLAKWLWRFRFESDSLWVRIIVSK--HSQHPYMWL
        +P Y ++ F  P ++C  +  ++ DF      E KG H  +W  +S   + GG+   ++   N ALL K +WR     +SL  ++  S+  H   P   L
Subjt:  IPIYFLSLFRAPISICNAMEKLMRDFLRERVDEGKGSHLVSWKVISKPMSFGGLEIGNLRTRNRALLAKWLWRFRFESDSLWVRIIVSK--HSQHPYMWL

Query:  SGGVKGTFGNPWKDISLELPSFSSLVQCIVGDERDICFWEDMWVGDRPLCSLFPRLYHLSSMKNRTVADILGPVGSSTSFSFGFRRSLSDRETTDIMALL
        +  +       WK I           + +VG+  DI  W   W+  +P  S   R+  +   +  +V+ IL            +R+ + +    ++   L
Subjt:  SGGVKGTFGNPWKDISLELPSFSSLVQCIVGDERDICFWEDMWVGDRPLCSLFPRLYHLSSMKNRTVADILGPVGSSTSFSFGFRRSLSDRETTDIMALL

Query:  SLIEGANLRSDRR---DVRFWSLDPSAGFSYRSFFRFLV-------NPSPVRE----SVFSCLWKVKALKKVLLFAWQVILGRFNTFDRLSRVKAPVVGP
               LR   R   D   W    S  ++ +S +  L        +P  V E     ++  +WK +   K+  F W+ +               PV G 
Subjt:  SLIEGANLRSDRR---DVRFWSLDPSAGFSYRSFFRFLV-------NPSPVRE----SVFSCLWKVKALKKVLLFAWQVILGRFNTFDRLSRVKAPVVGP

Query:  FCY---------LLCWKTKENLDHLLWNCEFARFVWS
          Y         + C   KE ++HLL+ C FAR  W+
Subjt:  FCY---------LLCWKTKENLDHLLWNCEFARFVWS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGACTCTCATTCGTTCTGTGCTCAAGGACATCCCTATATATTTCCTCTCTCTCTTTCGGGCGCCCATATCAATTTGTAATGCCATGGAAAAGCTCATGAGAGATTTCTT
AAGGGAAAGGGTTGATGAAGGGAAAGGTTCCCATCTTGTGAGTTGGAAGGTTATTAGTAAACCTATGAGTTTTGGGGGTCTTGAGATTGGCAATTTAAGAACTCGTAACA
GAGCCCTGCTTGCCAAATGGCTTTGGCGTTTTCGCTTTGAATCTGATTCTCTTTGGGTTAGGATTATTGTGAGTAAACACAGTCAACATCCTTACATGTGGCTGTCGGGT
GGGGTCAAAGGCACCTTCGGGAATCCTTGGAAAGACATTTCCTTGGAGCTCCCCTCTTTCTCTTCTTTGGTCCAGTGCATTGTGGGGGACGAGAGGGATATTTGTTTTTG
GGAGGATATGTGGGTGGGGGATCGTCCCCTCTGCTCCTTGTTCCCGCGTCTTTATCATTTATCTTCGATGAAAAATCGCACTGTGGCAGACATCCTTGGTCCTGTGGGGA
GTTCCACTTCGTTTTCTTTTGGTTTTCGTCGTTCGTTATCTGATAGAGAGACCACGGACATCATGGCCCTCTTATCTTTGATTGAGGGGGCTAACCTTAGATCGGATAGG
AGGGATGTGCGCTTTTGGAGTCTTGACCCCTCTGCGGGCTTTTCCTACAGATCGTTCTTTCGGTTTCTGGTCAATCCCTCCCCTGTTAGAGAGTCTGTCTTTTCGTGTCT
CTGGAAGGTTAAGGCTCTGAAGAAGGTCTTGTTGTTTGCTTGGCAGGTCATCTTGGGCCGTTTTAACACTTTTGATAGGCTTTCGAGAGTGAAGGCTCCTGTGGTTGGTC
CTTTTTGCTACTTGCTTTGTTGGAAGACTAAGGAAAATCTTGATCATTTGTTATGGAATTGTGAGTTTGCTCGCTTTGTTTGGAGTCCCTTCTTTGAGGTCTTCGCGTTT
CGTTTTGCGAGCCACCACCGTTATAGGGATACGATCGAGGAGTTCCTCCTCCATCCACCGTTTCGGAAGAAAGGAAAGTTACTTTGGCATGCGCGTCCGGGCGCGCGCCT
AGGCGCAAGGCGCAACGTTAGCGCCTCGCTTCCAAGTAGCGAGGCGCATGGCCAATCAGCAGGTCCCTTGTCAATGAAACTCCCTCTTGCTGTAAAGGGTTCTGTCTCAA
CCAAAAAGTATATCGTGCTTTCTGAAAAATTACATAATTGTGACAATGTTGAAGATCAAAGCATTGAAAACATATGCTCTTTTGGAGATTCAATCTTGCCCCATTCTTGT
TTGCTGGATGAGGATCTGTACTCTGATTTTAGAAAAAGTGATGACACCGCTAGTAAACCAAAGCACAAATTGCGGAAGGAGGTTTCTAAGCAAGACGACCCATCAAGCTC
AAGTTGCAGGAACCATTTTGAGGAAGCAACTCCCTCTGGATTTTTTGCAATTGAGCGTGGTAGCTCTTCAAGCTTGGCGAGAGATGAAAGAAAAGGTGAAAACAGTATTC
AGAATCCTGCAGTTAAATCTTCACGGAGGCGGCGGCTTGTGAACAAAAATTCTAGTGAAGATCCTAACGAGCCTAATGCTTGGAATTTTGACCCGGAGTGCTATCACTTG
GGAACTAGTAACCATGGTAATAGTCTTAGAGTTTCATCTAGCCATTTGGATGATGAAGCAGATATTGAAGTGGTAAACATTGGAGGAACATCTGATCGTGAGCAGTTGTG
TGACGAAAGGGGACTAGCAAGTAACAGTTATGAAGGTGTTGAAGCTTGTGAGAATCTATCTACTTCCAGAGATACAAACTTACCAGTCGGAAATGAACCAAGAGTCCTCA
CGATAACTTCGGAAGATGAATTGCACGATATTAGTGATTTACAAAAGAACATTGAGGACCCAGTTATAGAAGTTAATGCGTGCTTACCTTCCAATTCAACAGAGCTATCA
TGTGTGATCTGTTGGACAGATTTTAGTTCGACAAGGGGAGTTTTGCCCTGTGGCCATCGATTTTGCTATTCATGCATTCAAAACTGGGCAGATCACATGGCTTCAAGCAG
AAAGATCTCAACTTGCCCTTTGTGCAAAGCCAGTTTTCTGAGCATCACGAAGGTTGAAGATGCTGCCACTTCGGATCAGAAGATATACTCTCAAACAATTCCATGTGGTC
CATCATTATTAGATATTTACATTCTTCCTGATGAAAGAACTTTTAACAGCAGTGTTCAGCCCTCTGTAGCAACTGTATGTAGTTCATGCCGATGTCGGGAACCAGAGGAC
CTCCTCGTAAGCTGCCATCTTTGCCAGATTCGACATATTCATTCGTATTGTCTGGACCCTCCCTTGTTACCATGGACTTGTATTCACTGTGATTGCAAAGAGCAAATGGG
AAGGCAATTGAGGTTAGCTGAAGATTTTGAAGCAAAGAAAAACCAGCCTGCCTCCCATGAATCTTCACTGCTAAGTAACCATTATTCAACCCACTACAGTAACTATCACC
TCACTTTTTCCATGCGACTCCTTGACTTTTCCGACGACCGCCGGCCGTCGTCAGTCGGCGAAGTTTCCGACGAATTTTCCGACGACGACTTTTCCGGCGATCGCCGATGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MTLIRSVLKDIPIYFLSLFRAPISICNAMEKLMRDFLRERVDEGKGSHLVSWKVISKPMSFGGLEIGNLRTRNRALLAKWLWRFRFESDSLWVRIIVSKHSQHPYMWLSG
GVKGTFGNPWKDISLELPSFSSLVQCIVGDERDICFWEDMWVGDRPLCSLFPRLYHLSSMKNRTVADILGPVGSSTSFSFGFRRSLSDRETTDIMALLSLIEGANLRSDR
RDVRFWSLDPSAGFSYRSFFRFLVNPSPVRESVFSCLWKVKALKKVLLFAWQVILGRFNTFDRLSRVKAPVVGPFCYLLCWKTKENLDHLLWNCEFARFVWSPFFEVFAF
RFASHHRYRDTIEEFLLHPPFRKKGKLLWHARPGARLGARRNVSASLPSSEAHGQSAGPLSMKLPLAVKGSVSTKKYIVLSEKLHNCDNVEDQSIENICSFGDSILPHSC
LLDEDLYSDFRKSDDTASKPKHKLRKEVSKQDDPSSSSCRNHFEEATPSGFFAIERGSSSSLARDERKGENSIQNPAVKSSRRRRLVNKNSSEDPNEPNAWNFDPECYHL
GTSNHGNSLRVSSSHLDDEADIEVVNIGGTSDREQLCDERGLASNSYEGVEACENLSTSRDTNLPVGNEPRVLTITSEDELHDISDLQKNIEDPVIEVNACLPSNSTELS
CVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMASSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERTFNSSVQPSVATVCSSCRCREPED
LLVSCHLCQIRHIHSYCLDPPLLPWTCIHCDCKEQMGRQLRLAEDFEAKKNQPASHESSLLSNHYSTHYSNYHLTFSMRLLDFSDDRRPSSVGEVSDEFSDDDFSGDRR

Lag0030823 (gene) of Sponge gourd (AG-4) v1 genome