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Lag0030825 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0030825
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptioncentromere protein F
Genome locationchr11:1780180..1782211
RNA-Seq ExpressionLag0030825
SyntenyLag0030825
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581169.1 hypothetical protein SDJN03_21171, partial [Cucurbita argyrosperma subsp. sororia]3.2e-4192Show/hide
Query:  MAGLLAWAADVVGGGSGVNHDDEQSTSIPIMFTPEQQKYVRELNQKAASLSRSIHDLRLRLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREHVRL
        MAGLLAWAADVVGGG+  NHDDEQ+TSIPI+FTPEQQKYVRELNQKAASLSRSI DLRLRLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTRE V+L
Subjt:  MAGLLAWAADVVGGGSGVNHDDEQSTSIPIMFTPEQQKYVRELNQKAASLSRSIHDLRLRLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREHVRL
XP_022935341.1 uncharacterized protein PFB0145c [Cucurbita moschata]3.2e-4192Show/hide
Query:  MAGLLAWAADVVGGGSGVNHDDEQSTSIPIMFTPEQQKYVRELNQKAASLSRSIHDLRLRLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREHVRL
        MAGLLAWAADVVGGG+  NHDDEQ+TSIPI+FTPEQQKYVRELNQKAASLSRSI DLRLRLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTRE V+L
Subjt:  MAGLLAWAADVVGGGSGVNHDDEQSTSIPIMFTPEQQKYVRELNQKAASLSRSIHDLRLRLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREHVRL
XP_022983408.1 rab11 family-interacting protein 3 [Cucurbita maxima]9.3e-4191Show/hide
Query:  MAGLLAWAADVVGGGSGVNHDDEQSTSIPIMFTPEQQKYVRELNQKAASLSRSIHDLRLRLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREHVRL
        MAGLLAWAADVVGGG+  NHDDEQ+TSIPI+FTPEQQKYVRELNQKAASLSRSI DLRL+LPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTRE V+L
Subjt:  MAGLLAWAADVVGGGSGVNHDDEQSTSIPIMFTPEQQKYVRELNQKAASLSRSIHDLRLRLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREHVRL
XP_023528196.1 uncharacterized protein PFB0145c [Cucurbita pepo subsp. pepo]3.2e-4192Show/hide
Query:  MAGLLAWAADVVGGGSGVNHDDEQSTSIPIMFTPEQQKYVRELNQKAASLSRSIHDLRLRLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREHVRL
        MAGLLAWAADVVGGG+  NHDDEQ+TSIPI+FTPEQQKYVRELNQKAASLSRSI DLRLRLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTRE V+L
Subjt:  MAGLLAWAADVVGGGSGVNHDDEQSTSIPIMFTPEQQKYVRELNQKAASLSRSIHDLRLRLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREHVRL
XP_038895964.1 golgin subfamily A member 1 [Benincasa hispida]1.2e-4087.5Show/hide
Query:  MAGLLAWAADVV--GGGSGVNHDDEQSTSIPIMFTPEQQKYVRELNQKAASLSRSIHDLRLRLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREHV
        MAGLLAWAADVV  GGG G NHDDEQ TSIPI+FTPEQQ YVRELNQKAASLSRS+ DLRLRLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTRE V
Subjt:  MAGLLAWAADVV--GGGSGVNHDDEQSTSIPIMFTPEQQKYVRELNQKAASLSRSIHDLRLRLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREHV

Query:  RLLI
        +L +
Subjt:  RLLI
TrEMBL top hitse value%identityAlignment
A0A0A0L9S6 Uncharacterized protein1.9e-3985.15Show/hide
Query:  MAGLLAWAADVV-GGGSGVNHDDEQSTSIPIMFTPEQQKYVRELNQKAASLSRSIHDLRLRLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREHVR
        MAGLL+WAADVV GGG G NH+DE++TSIP++FTP+QQ YVRELNQKAASLSRS+ DLRLRLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTRE V+
Subjt:  MAGLLAWAADVV-GGGSGVNHDDEQSTSIPIMFTPEQQKYVRELNQKAASLSRSIHDLRLRLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREHVR

Query:  L
        L
Subjt:  L
A0A1S3CFI4 centromere protein F7.7e-4187Show/hide
Query:  MAGLLAWAADVVGGGSGVNHDDEQSTSIPIMFTPEQQKYVRELNQKAASLSRSIHDLRLRLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREHVRL
        MAGLL+WAADVV GG G NH+DE+STSIP++FTPEQQ YVRELNQKAASLSRS+ DLRLRLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTRE V+L
Subjt:  MAGLLAWAADVVGGGSGVNHDDEQSTSIPIMFTPEQQKYVRELNQKAASLSRSIHDLRLRLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREHVRL
A0A5A7T417 Centromere protein F7.7e-4187Show/hide
Query:  MAGLLAWAADVVGGGSGVNHDDEQSTSIPIMFTPEQQKYVRELNQKAASLSRSIHDLRLRLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREHVRL
        MAGLL+WAADVV GG G NH+DE+STSIP++FTPEQQ YVRELNQKAASLSRS+ DLRLRLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTRE V+L
Subjt:  MAGLLAWAADVVGGGSGVNHDDEQSTSIPIMFTPEQQKYVRELNQKAASLSRSIHDLRLRLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREHVRL
A0A6J1F4A5 uncharacterized protein PFB0145c1.6e-4192Show/hide
Query:  MAGLLAWAADVVGGGSGVNHDDEQSTSIPIMFTPEQQKYVRELNQKAASLSRSIHDLRLRLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREHVRL
        MAGLLAWAADVVGGG+  NHDDEQ+TSIPI+FTPEQQKYVRELNQKAASLSRSI DLRLRLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTRE V+L
Subjt:  MAGLLAWAADVVGGGSGVNHDDEQSTSIPIMFTPEQQKYVRELNQKAASLSRSIHDLRLRLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREHVRL
A0A6J1J7P1 rab11 family-interacting protein 34.5e-4191Show/hide
Query:  MAGLLAWAADVVGGGSGVNHDDEQSTSIPIMFTPEQQKYVRELNQKAASLSRSIHDLRLRLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREHVRL
        MAGLLAWAADVVGGG+  NHDDEQ+TSIPI+FTPEQQKYVRELNQKAASLSRSI DLRL+LPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTRE V+L
Subjt:  MAGLLAWAADVVGGGSGVNHDDEQSTSIPIMFTPEQQKYVRELNQKAASLSRSIHDLRLRLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREHVRL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G15880.1 unknown protein1.2e-3071Show/hide
Query:  MAGLLAWAADVVGGGSGVNHDDEQSTSIPIMFTPEQQKYVRELNQKAASLSRSIHDLRLRLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREHVRL
        MAGLLAWAADVV G +G   DDE+   IP++FT EQQKYV EL +KA +LSRSI DLRLRLPPPDISQRLP LHAHSLAS A LTLQL++HS+TRE   +
Subjt:  MAGLLAWAADVVGGGSGVNHDDEQSTSIPIMFTPEQQKYVRELNQKAASLSRSIHDLRLRLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREHVRL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAATGAATTCAAGCCATCACTTGTTGTTGAATCTGATTCGCTCGAAGTCACTGGGGTTCTTAACCGCAAGATTGAGGACTTATCTGATCTATCGTTGATTGTAGA
AGAGATCGAGGGGATTAGAGAGAGTGCCAACGTTATTTCCTTCGTCAAATCTTCGAGATCGAGGAGTGTGGAAGCTCACAATTTGGCGCGAGCAACAATCTCCTATGAGA
TTTTGATGGTTTTTTTGGGCATTTTTAGTTCCCGCTTTTTGGGGAAAGTGAATGCAATAGGGATGTTGTTATCCTTTTTTGAGTATATTCATTGGGAGTGTAGCGACGGA
CAGGATCAGGTAAAAATGGCGGGTTTGCTCGCATGGGCGGCGGACGTCGTCGGCGGCGGCAGCGGAGTGAACCACGACGACGAACAGAGCACTTCGATTCCCATAATGTT
TACTCCGGAGCAGCAGAAGTATGTTCGAGAATTGAATCAGAAAGCAGCTTCTCTCAGCCGCTCGATCCACGATCTGCGGCTTCGTTTGCCTCCTCCCGACATCTCCCAAC
GCCTTCCTCACCTTCATGCCCACTCTCTTGCGTCCACTGCCGATCTTACTCTTCAATTGAACGCCCACTCTTCCACTCGCGAACATGTTAGGCTTCTGATTCGTTTGATC
GGTGCAAAAATGTTTCCTTTGGTGGAATATTTTCTTAGCTCGATGTTGTATTGGATCCCTATTTTTCAAGTGTCATTTTTCGTCGTTATTCGATGTTTACGCATTCATAT
GTCTATGTTTCGATTGATCTACGCTGGAATTTCAAGTTTGAAAAATAACCCGGCTGCCTCTGTGCAAGTGGCTCTAAGATCTGATGCATGGCCTGCATTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAAATGAATTCAAGCCATCACTTGTTGTTGAATCTGATTCGCTCGAAGTCACTGGGGTTCTTAACCGCAAGATTGAGGACTTATCTGATCTATCGTTGATTGTAGA
AGAGATCGAGGGGATTAGAGAGAGTGCCAACGTTATTTCCTTCGTCAAATCTTCGAGATCGAGGAGTGTGGAAGCTCACAATTTGGCGCGAGCAACAATCTCCTATGAGA
TTTTGATGGTTTTTTTGGGCATTTTTAGTTCCCGCTTTTTGGGGAAAGTGAATGCAATAGGGATGTTGTTATCCTTTTTTGAGTATATTCATTGGGAGTGTAGCGACGGA
CAGGATCAGGTAAAAATGGCGGGTTTGCTCGCATGGGCGGCGGACGTCGTCGGCGGCGGCAGCGGAGTGAACCACGACGACGAACAGAGCACTTCGATTCCCATAATGTT
TACTCCGGAGCAGCAGAAGTATGTTCGAGAATTGAATCAGAAAGCAGCTTCTCTCAGCCGCTCGATCCACGATCTGCGGCTTCGTTTGCCTCCTCCCGACATCTCCCAAC
GCCTTCCTCACCTTCATGCCCACTCTCTTGCGTCCACTGCCGATCTTACTCTTCAATTGAACGCCCACTCTTCCACTCGCGAACATGTTAGGCTTCTGATTCGTTTGATC
GGTGCAAAAATGTTTCCTTTGGTGGAATATTTTCTTAGCTCGATGTTGTATTGGATCCCTATTTTTCAAGTGTCATTTTTCGTCGTTATTCGATGTTTACGCATTCATAT
GTCTATGTTTCGATTGATCTACGCTGGAATTTCAAGTTTGAAAAATAACCCGGCTGCCTCTGTGCAAGTGGCTCTAAGATCTGATGCATGGCCTGCATTGTAG
Protein sequenceShow/hide protein sequence
MGNEFKPSLVVESDSLEVTGVLNRKIEDLSDLSLIVEEIEGIRESANVISFVKSSRSRSVEAHNLARATISYEILMVFLGIFSSRFLGKVNAIGMLLSFFEYIHWECSDG
QDQVKMAGLLAWAADVVGGGSGVNHDDEQSTSIPIMFTPEQQKYVRELNQKAASLSRSIHDLRLRLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREHVRLLIRLI
GAKMFPLVEYFLSSMLYWIPIFQVSFFVVIRCLRIHMSMFRLIYAGISSLKNNPAASVQVALRSDAWPAL