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Lag0030837 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0030837
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSSD domain-containing protein
Genome locationchr11:1907491..1910805
RNA-Seq ExpressionLag0030837
SyntenyLag0030837
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0048868 - pollen tube development (biological process)
GO:0090153 - regulation of sphingolipid biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005319 - lipid transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047847.1 Niemann-Pick C1 protein-like isoform X2 [Cucumis melo var. makuwa]2.7e-0681.58Show/hide
Query:  KVALGFPGSPYAINFKVNTSNSSQMELMNVSVYSWNRT
        KVA GFPGSPY+INFKVN S SSQMELMNVSVYS   T
Subjt:  KVALGFPGSPYAINFKVNTSNSSQMELMNVSVYSWNRT
XP_008448193.1 PREDICTED: Niemann-Pick C1 protein-like isoform X1 [Cucumis melo]2.7e-0681.58Show/hide
Query:  KVALGFPGSPYAINFKVNTSNSSQMELMNVSVYSWNRT
        KVA GFPGSPY+INFKVN S SSQMELMNVSVYS   T
Subjt:  KVALGFPGSPYAINFKVNTSNSSQMELMNVSVYSWNRT
XP_011656918.1 NPC intracellular cholesterol transporter 1 isoform X1 [Cucumis sativus]1.2e-0684.21Show/hide
Query:  KVALGFPGSPYAINFKVNTSNSSQMELMNVSVYSWNRT
        KVA GFPGSPYAINFKVN S SSQMELMNVSVYS   T
Subjt:  KVALGFPGSPYAINFKVNTSNSSQMELMNVSVYSWNRT
XP_011656920.1 NPC intracellular cholesterol transporter 1 isoform X2 [Cucumis sativus]1.2e-0684.21Show/hide
Query:  KVALGFPGSPYAINFKVNTSNSSQMELMNVSVYSWNRT
        KVA GFPGSPYAINFKVN S SSQMELMNVSVYS   T
Subjt:  KVALGFPGSPYAINFKVNTSNSSQMELMNVSVYSWNRT
XP_038878641.1 NPC intracellular cholesterol transporter 1-like [Benincasa hispida]1.2e-0684.21Show/hide
Query:  KVALGFPGSPYAINFKVNTSNSSQMELMNVSVYSWNRT
        KVA GFPGSPYAINFKVN S SSQMELMNVSVYS   T
Subjt:  KVALGFPGSPYAINFKVNTSNSSQMELMNVSVYSWNRT
TrEMBL top hitse value%identityAlignment
A0A1S3BJ43 Niemann-Pick C1 protein-like isoform X11.3e-0681.58Show/hide
Query:  KVALGFPGSPYAINFKVNTSNSSQMELMNVSVYSWNRT
        KVA GFPGSPY+INFKVN S SSQMELMNVSVYS   T
Subjt:  KVALGFPGSPYAINFKVNTSNSSQMELMNVSVYSWNRT
A0A1S3BJR3 Niemann-Pick C1 protein-like isoform X21.3e-0681.58Show/hide
Query:  KVALGFPGSPYAINFKVNTSNSSQMELMNVSVYSWNRT
        KVA GFPGSPY+INFKVN S SSQMELMNVSVYS   T
Subjt:  KVALGFPGSPYAINFKVNTSNSSQMELMNVSVYSWNRT
A0A5A7U0V7 Niemann-Pick C1 protein-like isoform X21.3e-0681.58Show/hide
Query:  KVALGFPGSPYAINFKVNTSNSSQMELMNVSVYSWNRT
        KVA GFPGSPY+INFKVN S SSQMELMNVSVYS   T
Subjt:  KVALGFPGSPYAINFKVNTSNSSQMELMNVSVYSWNRT
A0A6J1CI77 Niemann-Pick C1 protein4.3e-0573.68Show/hide
Query:  KVALGFPGSPYAINFKVNTSNSSQMELMNVSVYSWNRT
        K A GFPGSPY INFK+NT  SS MELMNVSVYS   T
Subjt:  KVALGFPGSPYAINFKVNTSNSSQMELMNVSVYSWNRT
A0A6J5VYP1 NPC1_N domain-containing protein1.2e-0476.47Show/hide
Query:  KVALGFPGSPYAINFKVNTSNSSQMELMNVSVYS
        K ALGFPGSPYAI+FK+    SS+MELMNVSVYS
Subjt:  KVALGFPGSPYAINFKVNTSNSSQMELMNVSVYS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G38350.1 Patched family protein1.4e-0563.16Show/hide
Query:  KVALGFPGSPYAINFKVNTSNSSQMELMNVSVYSWNRT
        K   GFPGSPYAINFK +   SS M  MNVSVYS   T
Subjt:  KVALGFPGSPYAINFKVNTSNSSQMELMNVSVYSWNRT
AT4G38350.2 Patched family protein1.4e-0563.16Show/hide
Query:  KVALGFPGSPYAINFKVNTSNSSQMELMNVSVYSWNRT
        K   GFPGSPYAINFK +   SS M  MNVSVYS   T
Subjt:  KVALGFPGSPYAINFKVNTSNSSQMELMNVSVYSWNRT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTCACTATTGCTGCTTCCTTTTCATAAAGTAGCCCTTGGTTTTCCTGGATCACCTTATGCCATAAACTTTAAGGTGAACACTTCAAATTCATCTCAAATGGAGCT
TATGAATGTGTCTGTTTATTCATGGAATAGAACGCCTGAGGATTCATGGTATCAATACTATTTGCTTAATTGTACTGGATATGTGAGCCTGCACCGTGCTCTTGGATTGG
TTCGCTTTAAGGCACAACGTTATAAAGATGCTACTCGTCAGATGATGAAATGGATATTCTCGAAAAGGAGCTCGAAGAGGAACTTGGCCGGAAGAGCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCTCACTATTGCTGCTTCCTTTTCATAAAGTAGCCCTTGGTTTTCCTGGATCACCTTATGCCATAAACTTTAAGGTGAACACTTCAAATTCATCTCAAATGGAGCT
TATGAATGTGTCTGTTTATTCATGGAATAGAACGCCTGAGGATTCATGGTATCAATACTATTTGCTTAATTGTACTGGATATGTGAGCCTGCACCGTGCTCTTGGATTGG
TTCGCTTTAAGGCACAACGTTATAAAGATGCTACTCGTCAGATGATGAAATGGATATTCTCGAAAAGGAGCTCGAAGAGGAACTTGGCCGGAAGAGCGTAG
Protein sequenceShow/hide protein sequence
MVSLLLLPFHKVALGFPGSPYAINFKVNTSNSSQMELMNVSVYSWNRTPEDSWYQYYLLNCTGYVSLHRALGLVRFKAQRYKDATRQMMKWIFSKRSSKRNLAGRA